jgi.p|Nanoce1779_2|592821, gene_5522 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|592821
Unique Namegene_5522
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:624189..625886 -

Link to JBrowse

Properties
Property NameValue
TranscriptId592907
ProteinId592821
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:624189..625886 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03480NO12G03480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592821mRNA_5522-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592821mRNA_5522Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|592821

>mRNA_5522-protein ID=mRNA_5522-protein|Name=jgi.p|Nanoce1779_2|592821|organism=Nannochloropsis oceanica|type=polypeptide|length=490bp
MEEESMPMATMQAQEDTDDDISKYFYKSSPECLEDSTNSISSRGNTAFSS
SVAGGSKTTDDVVTSVYRPLLMTGTTPNSTSSIFCRNTACNPDADQIILC
MSSVLQVQMLHDKQAGGNEALRERFRVFEAPVTARTGALGGGGRVAAAAA
AAKGGEGMMVVEEEEGQQQQQQQEEGLEEEVTVEEIHHFIEGIFKRSRFS
PECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALS
SFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKL
LEQESISREFPLKPMAMWQARKLELCSDSFGLRARGASSNSNISAASISM
SGGSASMGGRPPSSSTSASSTLPTRPLTGVQPHSPLEPFAAATAAAAGGG
AATPGCGPLRSSLLRLPPPGPSSKHPTTVSYPSSSLSSTSSTSSSSSRKP
RNVTASGIALNSPWTPLPQSPSPTYEDVTYMPKGRYVQS*
back to top
Synonyms
Publications