NO12G02310, NO12G02310 (gene) Nannochloropsis oceanica

Overview
NameNO12G02310
Unique NameNO12G02310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3060
Alignment locationchr12:663310..666369 +

Link to JBrowse

Properties
Property NameValue
DescriptionWd repeat-containing protein 43
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:663310..666369 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR007148SSU_processome_Utp12
IPR001680WD40_repeat
Homology
BLAST of NO12G02310 vs. NCBI_GenBank
Match: EWM25816.1 (wd repeat-containing protein 43 [Nannochloropsis gaditana])

HSP 1 Score: 432.2 bits (1110), Expect = 2.100e-117
Identity = 239/424 (56.37%), Postives = 292/424 (68.87%), Query Frame = 0
Query:    1 MSFSDDGGFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLALRAEPMSAEENAAIVFTVLACCDTGTVRLLRQRWSPSQATRC--SDTANGTGIAAATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKTLEAQDPASKKVATD--GSSGLGNDEALQLATASRTSSXXXXXXXDAKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRA----GPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQISKHGSG 417
            M+FS+DG FLATAS G+RH+N+F C+ K K  EAV T +LDGCPT LALRA+P S  E  AIV T+LACCDTG+VR+LRQ W+ + A  C  + ++   G  A      PPT++ V+T    KE+E +SAL ACFLPW G  G +AWRV L  G E AP F +FS A+G+  DELLP+V+L   R       +++  A  KRKR+EVK +E QDPASK+ A D  G SGL N   +      R  +       D  T+GRRLQ + + L QG   E  GA+V    V  A    G KADSL TVLSQALKSGDE+LLEQCL V D  ++S TV+LL+APL  P ++TLVRKLEKRPNRA +LCPW+RF+LLHHTSYL+  PGLDQRLAGLHK+ TRRVTVLPRLLGL GRL+LML+QISKHGSG
Sbjct:  194 MAFSEDGHFLATASVGSRHINIFSCQGKDK--EAVLTAALDGCPTWLALRADP-SGREKGAIVLTLLACCDTGSVRVLRQSWAAAHAPPCDSAGSSEDAGALARAGTRAPPTTLRVLTVTDGKESEKVSALAACFLPWAGRKGSIAWRVGLAYGAESAPVFTSFSIASGEETDELLPRVLLEGSRLTSEKGKQEDGLASNKRKRREVKAVEMQDPASKRTALDEHGISGLNNAAGVGAMIEMRGDT------EDDDTMGRRLQKMAEGLSQG--LEGHGALVAAGPVATAAKSMGSKADSLFTVLSQALKSGDEELLEQCLAVQDTQILSKTVRLLTAPLVFPFINTLVRKLEKRPNRAVSLCPWIRFVLLHHTSYLIGTPGLDQRLAGLHKVATRRVTVLPRLLGLSGRLELMLAQISKHGSG 606          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: CBJ29131.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 134.4 bits (337), Expect = 9.100e-28
Identity = 138/423 (32.62%), Postives = 180/423 (42.55%), Query Frame = 0
Query:    1 MSFSDDGGFLATASQGARHVNVFD-CRDKKKNREAVATLSLDGCPTSLALRAEPMSAE--ENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIAAATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKTLEAQDPASKKVATDGSSGLGNDEALQLATASRTSSXXXXXXXDAKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQISKHGSGHQQA 421
            +SFS DG +LA+++  AR  NVFD    +    E V TL     P  L+L A   S    + +    TV+A  DTG V ++R R       R +D   G       +      S       GR  +E  S+                  + L  G   +P F   SF    G       V    G      A  +E   GT  K      +   +   + V  D  +G G       A       XXXXXXX  +   R                               P+A+SL TVL+QAL+SGDE LLEQCL V D  VI  TV+ L +   L  +  +V KLEKRPNRAA+L  W+R LL  H  YLVSVPGL  +LA LH+L+ RRV   P+L+ L GRLDL+L++     S    A
Sbjct:  204 LSFSADGRYLASSASSARFANVFDVAASEVPPSEPVCTLGFAATPAFLSLHAASSSGXXGDVSTDQVTVVAGFDTGGVSVMRTR-------RQTDGKGGAVSKLDIRGAAGGPSSSPAALHGRLSSERPSS-----------------AILLATGSAASPGFVEASFEDEAGSLLSSSSVATAGGH-----ADGEEDEEGTGDKGGPAHVVGPGELGIRGVEKDSVAGEG-------ARXXXXXXXXXXXXXXXRAPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQPRAESLSTVLTQALQSGDESLLEQCLDVVDQGVIEATVERLPSSKVLQFLLRVVAKLEKRPNRAASLGRWIRALLSCHLGYLVSVPGLPDKLALLHQLIDRRVASFPKLIQLHGRLDLLLARAKAESSRRDAA 590          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: OQS03731.1 (hypothetical protein THRCLA_03969 [Thraustotheca clavata])

HSP 1 Score: 124.0 bits (310), Expect = 1.200e-24
Identity = 64/127 (50.39%), Postives = 88/127 (69.29%), Query Frame = 0
Query:  285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412
            RA   + SLVTVL QAL+S D  LLE CL VHD  VI  T + LSA    P +  LV K EKRP R AT+C W+++L+L+HT+YL++VPG+  +L+GL++ +  R+ V P+L  L GRL+L+L QI+
Sbjct:  439 RAQASSSSLVTVLEQALQSKDSALLESCLRVHDIKVIDETCRRLSATKVFPFLLLLVEKFEKRPTRGATMCVWIKYLMLNHTAYLMTVPGVVDKLSGLYQSLDARLKVFPQLHKLNGRLNLVLGQIA 565          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: OQR86987.1 (hypothetical protein ACHHYP_09655 [Achlya hypogyna])

HSP 1 Score: 120.9 bits (302), Expect = 1.000e-23
Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 0
Query:  285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412
            +A   + SLVTVL QALKS D  LLE CL VHD  VI  T + LSA      +  LV K EKRP R ATLC W+++LLL+HT+YL++VP + ++L GL++ +  R+ V P+L  L GRL+L+L QI+
Sbjct:  435 QAQASSTSLVTVLEQALKSKDNALLENCLRVHDIKVIDETCRRLSATKVFAFIVLLVEKFEKRPTRGATLCVWIKYLLLNHTAYLMTVPNVVEQLTGLYQSLDSRLKVFPQLHKLNGRLNLVLGQIA 561          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_011270609.1 (hypothetical protein CAOG_08938 [Capsaspora owczarzaki ATCC 30864] >KJE95621.1 hypothetical protein CAOG_008938 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 120.2 bits (300), Expect = 1.800e-23
Identity = 64/127 (50.39%), Postives = 88/127 (69.29%), Query Frame = 0
Query:  285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412
            RA PKA SLV +L QAL SGD  LLE CL V +  VI NT++ L A   +P +  +V K + +P+R  TL  W+R LLL HT+YL++VP L + L+GL++LV  R++V  +LL L GRLDL++SQI+
Sbjct:  471 RAPPKAHSLVQMLVQALHSGDNQLLEDCLSVSNEAVIRNTMKKLPASYVIPFLTLIVEKFQAKPSRGLTLLIWIRGLLLVHTAYLMTVPNLVEALSGLYQLVDARLSVFKKLLKLSGRLDLIISQIA 597          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_008604042.1 (hypothetical protein SDRG_00348 [Saprolegnia diclina VS20] >EQC42619.1 hypothetical protein SDRG_00348 [Saprolegnia diclina VS20])

HSP 1 Score: 120.2 bits (300), Expect = 1.800e-23
Identity = 63/119 (52.94%), Postives = 84/119 (70.59%), Query Frame = 0
Query:  293 LVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412
            LV+VL QAL+S D  LLE CL VHD  VI  T + LS     P V  LV KLEKRP R ATLC W+++LLL+HT+YL++VP +  +L+GL++ +  R+TV P+L  L GRL+L+L QI+
Sbjct:  445 LVSVLEQALQSKDNVLLENCLRVHDLKVIDETCRRLSPTKVFPFVLLLVEKLEKRPTRGATLCLWIKYLLLNHTAYLMTVPDVVDKLSGLYQALDARLTVFPQLHKLNGRLNLVLGQIA 563          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: ORY95318.1 (WD40-repeat-containing domain protein [Syncephalastrum racemosum])

HSP 1 Score: 119.8 bits (299), Expect = 2.300e-23
Identity = 118/411 (28.71%), Postives = 179/411 (43.55%), Query Frame = 0
Query:    1 MSFSDDGGFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLAL-RAEPMSAEENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIAAATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKTLEAQDPASKKVATDGSSGLGNDEALQLATASRTSSXXXXXXXDAKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQI 411
            ++FS     L + ++  R+VNV+D +    N   +  L+L+   T +    +EP           TVLA  + G V L R   + SQAT  S       I   T  T       V     + E+  I  L+A F+  D  G      + +  G    PSFE   +      D L   V+      N+    E       K  RK+       D +S KV            A   A  + T            +I  +LQ +  + E G     +    +G       P A SL TVL+QAL + D  LLE CL  +   VI  TVQ +     +PL++ L+ + ++ PNRA+ L  W+R +L+ HT+YL++VP L  +L+G ++ +  R++V P+LL L GRLDL+ +QI
Sbjct:  224 LAFSRQDDILVSIAEDDRYVNVWDAQSTNNNTTTLTVLTLEDNATHVDFSSSEP-----------TVLAVAEDGVVGLWRN--ASSQATPTSRRKAARSITRQTDST-------VKVVSSKAEDTVIPILSATFVS-DNYG----QSIMIARGSSVRPSFEAVRYVNESTGDVLSDIVLTRQPAGNLLINDESAAVESVKASRKQ------YDESSVKVV----------GATDFAIQNPTMKEDVEMAEPDMSIEEKLQEMHVE-ENGTQPSTKRKADKG-----LVPSAGSLQTVLTQALHANDRALLEACLEHNKPEVIQTTVQRVPTAYIIPLLNELIARFQESPNRASRLMVWIRIVLMVHTTYLMTVPDLVYKLSGFYQALDVRLSVFPKLLALQGRLDLIQNQI 587          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_012212651.1 (hypothetical protein SPRG_17862, partial [Saprolegnia parasitica CBS 223.65] >KDO16640.1 hypothetical protein SPRG_17862, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23
Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 0
Query:  285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412
            +A   + SLV+VL QAL+S D  LLE CL VHD  VI  T + LS     P V  LV KLEKRP R AT+C W+++LLL+HT+YL++VP +  +L+GL++ +  R+ V P+L  L GRL+L+L QI+
Sbjct:   89 KAQASSTSLVSVLEQALQSKDNVLLENCLRVHDLKVIDETCRRLSPTKVFPFVLLLVEKLEKRPTRGATMCVWIKYLLLNHTAYLMTVPDVVDKLSGLYQSLDARLKVFPQLHKLNGRLNLVLGQIA 215          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_012206923.1 (hypothetical protein SPRG_11352 [Saprolegnia parasitica CBS 223.65] >KDO22400.1 hypothetical protein SPRG_11352 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23
Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 0
Query:  285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412
            +A   + SLV+VL QAL+S D  LLE CL VHD  VI  T + LS     P V  LV KLEKRP R AT+C W+++LLL+HT+YL++VP +  +L+GL++ +  R+ V P+L  L GRL+L+L QI+
Sbjct:  432 KAQASSTSLVSVLEQALQSKDNVLLENCLRVHDLKVIDETCRRLSPTKVFPFVLLLVEKLEKRPTRGATMCVWIKYLLLNHTAYLMTVPDVVDKLSGLYQSLDARLKVFPQLHKLNGRLNLVLGQIA 558          
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_016610083.1 (hypothetical protein SPPG_02548 [Spizellomyces punctatus DAOM BR117] >KND02044.1 hypothetical protein SPPG_02548 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23
Identity = 117/426 (27.46%), Postives = 189/426 (44.37%), Query Frame = 0
Query:    1 MSFSDDGGFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLALRAEPMSAEENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIAAATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKTLEAQDPASKKVATDGSSGLGNDEALQLATASRTSSXXXXXXXDAKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS--KHGSGHQQALQDK 425
            + FS    F  TA++  RH++V+D    +   + V +L++D  PT++A+                VLA  + G V L  +       T        + +A   Q       + +V++  +   E +  LTA F            ++    G    P FE   + + +G  +++ K  L   R  V +   DE  A   + +K++KT   +D     V   G++ L  D    +A     +        +  T+  RL  +              A     G     P A+SL  +LSQA+ + D  LLEQ L VHD ++I  TV+ L     LPL+D L+ +L++RPNRA  L  WVR ++L H  YL+SVP L   L  L++ +  R +V  +LL L GRLDL++SQI+   H   + +  +D+
Sbjct:  235 IQFSPSDSFCVTAAEDDRHISVWD-TGLEGTSDHVTSLTMDSAPTNIAISGGNQ-----------VLALTEEGIVYLWDKVDQKDGTTPVKKKKKQSNLARPAQGV-----LSIVSSSDKDAKERLPILTATFSD---------EKILFARGNVVKPIFERVEYLSDEG--KIIEKTTL--SRKPVTSLLIDE-EALVDQAQKDLKTRYKED----DVLVLGAADLPADSNTMMADPDMLTRDEQAALKE-PTLEERLSALVV----------TPASEAKPGKPARPPTANSLHQMLSQAIHTNDVQLLEQALQVHDTNMIVATVRRLPPSQVLPLLDQLMLRLQRRPNRARELIEWVRAVVLVHAGYLMSVPNLAANLGALYQTIDSRASVFQKLLRLSGRLDLVVSQIALRNHAGANGEVQEDE 614          
The following BLAST results are available for this feature:
BLAST of NO12G02310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25816.12.100e-11756.37wd repeat-containing protein 43 [Nannochloropsis g... [more]
CBJ29131.19.100e-2832.62conserved unknown protein [Ectocarpus siliculosus][more]
OQS03731.11.200e-2450.39hypothetical protein THRCLA_03969 [Thraustotheca c... [more]
OQR86987.11.000e-2350.39hypothetical protein ACHHYP_09655 [Achlya hypogyna... [more]
XP_011270609.11.800e-2350.39hypothetical protein CAOG_08938 [Capsaspora owczar... [more]
XP_008604042.11.800e-2352.94hypothetical protein SDRG_00348 [Saprolegnia dicli... [more]
ORY95318.12.300e-2328.71WD40-repeat-containing domain protein [Syncephalas... [more]
XP_012212651.13.000e-2349.61hypothetical protein SPRG_17862, partial [Saproleg... [more]
XP_012206923.13.000e-2349.61hypothetical protein SPRG_11352 [Saprolegnia paras... [more]
XP_016610083.13.000e-2327.46hypothetical protein SPPG_02548 [Spizellomyces pun... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010165NSK010165Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02310.1NO12G02310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G02310.2NO12G02310.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G02310.3NO12G02310.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|65420gene_5396Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g59gene4717Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02310.1NO12G02310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G02310.2NO12G02310.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G02310.3NO12G02310.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02310 ID=NO12G02310|Name=NO12G02310|organism=Nannochloropsis oceanica|type=gene|length=3060bp
GAGGACGATAATGGGCCTGAGAGGAAGCCGAAAGGAGCGAGGTGTGGGCG
GCGGCGACTCGAGTCGTTGGATGGGAGGGAGAGACAACTTCACTGGCTCC
TTTACTCCTCAATTTATTGCTCACATGCGTGCTTCGCGGTTGTTCCTAGC
GTGCTGTCTACATGCAGATCAAGGCATCGTGCAGCGACAAGGCTGTGCCG
ATGCATAATTGTTTGTCCACGGCGTTGGCTGGTTGGAGTGTGTGCCGCGG
TCAAGAATATCCGCTGTACGTGTACCCTCCCCATCCCATTCATGCATCCA
CTCATCGGCCACTCTCACCCACGCACAGGCGATAATGTGGCAGTATTCTT
CTGACGGGGAGCTGCTGGCTAGCGTGGCTCCAGACAATAGAATACGAGTC
TACGATGCGgtaagtgttggggaggcttcgagtgggccgctggatgtgcc
cacgtatatgcctgcacttatgaggtttgcgagcgctcttcgtcagggtc
aagagatgtgcggctcttccctcgactagaataacagggttgtgtgtctt
tcgggggggtgggatggggggatgagtgaaaggcgtagggcggagtggcc
atcgagttgccgtcgagaaatcgtttctaattcagccaggaagcagttcg
cacgcctgttctcacatccgctgcgtcaaatggtgacgaagcaaatctgc
tctagatccgcccgtgaatctcggcaaagttacactaagaagctgaaccc
cgtctaacgaccctttgtcttgtccactccctttcaactacatagGCGAC
AGGCACCCTGCGACAGAAGTACATAGAAAAGGACCACTTCGCCTTTCAAT
ATACCTGTCTTGCATGGGTGCGAGGCGTAATTTGGAACGACAAGGTATGT
ATAATCGAAAAAGAATTGCGATAATAATGTTCGGATGCCTGATACCAAGG
CAGACAATTGGATAGGCAGACTTGCCCTGATGAGACGCAAATTTCCAAAA
GCTTTTTAATTGGTCCGTGTTATTGATATGCAAGCCTGAGAAAAACAAAA
GCTCTGAGCACTTTAAGTCCTCCTATCGATCACTCTTTTTTTCACCACAC
CAATTGCTGGCGTTTTCTACCTGACTAATTTTTCGATTTTCTCGTTTTCA
ATGCTCGACCTACATAGCATGCAAACAAGGTTGTGCCCGGCCCTAAAAGC
GGGCTTGGGATACTGGTTCTCGGTAGTGACCAAGGTCACGTGAGCGTTTG
GGACTTGACGCGGGGGGTGCTTGCTCGGCGGTTGGGGGAGGGACAAAATT
TGAAGCGGGTTACAGGCGTAGCCTTTGCGGCGAGCAGTGCAACGCTCTAT
TCGACGGGTGCTGGGGACGCGGACGTGCTGGAGTGGGACTTGCGCACAGG
CGAGTGCAGTCGGCGCATCTCAGGAGACAAGCATGGGGCATCAGCGCTGG
CCTTGGACCCTGCCGAGAGCGCTACCTTGGCAGTGGCCCGAACTCGCATC
CACTTGCTCGACGTGGCGAGCGGGGAACGACGGAAAAAGATCGCATCCGG
ACACGCGGCTGCCGTGACACGCATGTCCTTTTCGGATGACGGAGGTTTCT
TGGCGACAGCCTCGCAGGGGGCTCGTCACGTGAATGTTTTCGACTGCCGG
GACAAGAAGAAGAACCGGGAGGCGGTGGCCACGCTGTCTTTGGACGGCTG
CCCCACTTCGTTGGCTTTGCGGGCCGAGCCTATGTCGGCGGAGGAGAATG
CAGCAATTGTATTCACGGTCCTCGCGTGCTGTGATACGGGCACCGTCCGC
CTGCTGAGGCAAAGATGGTCGCCGTCGCAGGCCACCAGGTGCAGCGATAC
CGCGAACGGCACAGGGATAGCAGCAGCAACACAAGTGACAGGTCCACCGA
CGAGCATGTACGTGGTGACGGCGGAAGGGAGAAAAGAGAACGAGAACATC
TCGGCGCTGACGGCCTGCTTCCTGCCGTGGGATGGGGATGGAGGGCCCCT
GGCCTGGCGGGTGGCTTTAGTGTGCGGTCCAGAATGCGCCCCGTCATTCG
AGACGTTCAGTTTCGCCACGGGCAAGGGGGTGGATGAGTTGCTTCCCAAA
GTGGTGCTGGGAGATGGCAGGAACAACGTAAGGACGGCAGGGGAGGACGA
GACTTCGGCGGGTACGAAGCGAAAAAGAAAGGAGGTCAAGACTCTGGAGG
CACAGGATCCTGCTTCCAAGAAGGTTGCCACTGATGGCAGTAGCGGCCTC
GGAAACGACGAGGCCCTGCAACTGGCCACCGCGAGTCGGACCAGCAGCAA
CAGTGAGGAAGAGGATGAGGACGCTAAGACAATTGGTCGCCGGCTGCAGA
CCATAACGAAGGACTTGGAGCAAGGGCGATGTAGGGAGCATGAGGGGGCG
ATGGTAGAGGGGGCGGGGGTACGGCGGGCAGGGCCTAAGGCCGACTCTCT
GGTTACGGTGTTGAGCCAAGCGCTGAAATCGGGCGATGAGGATTTGCTGG
AGCAATGTCTAGGTGTACATGATGCGCATGTGATCTCAAACACGGTGCAG
CTGCTCTCCGCGCCGCTTACGCTCCCACTTGTGGACACCTTAGTACGGAA
GCTCGAAAAACGGCCCAATCGCGCTGCTACACTCTGTCCATGGGTCCGCT
TCCTCCTCCTGCACCACACCAGCTACCTTGTCAGCGTGCCCGGCCTGGAC
CAGCGCTTGGCGGGCTTGCACAAGCTCGTCACCCGGCGGGTGACCGTACT
GCCCCGCCTCCTAGGTCTTATGGGCCGTTTGGATTTGATGCTTTCGCAGA
TTTCCAAGCATGGCAGCGGCCATCAACAAGCGCTACAGGACAAGGACAAG
GCAGCCATTGAGGTGTATGTAGACAGGGACAGTGACGAAGAAGATGAAGA
CGAGGATGATGAGAACGAGATCGCAGGCCTTGAAGGAGAGGAGGGGGAGA
GCAGCGTCGAAGAGGAGGTAGGTAAAGACGACGATGACTCGGATGAGGAT
TAGAGCTTAAAGTAGAAACGAGACGAAAACAACTCAAACTAACAAATCGT
ATGATTGATG
back to top

protein sequence of NO12G02310.1

>NO12G02310.1-protein ID=NO12G02310.1-protein|Name=NO12G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=670bp
MWQYSSDGELLASVAPDNRIRVYDAATGTLRQKYIEKDHFAFQYTCLAWV
RGVIWNDKHANKVVPGPKSGLGILVLGSDQGHVSVWDLTRGVLARRLGEG
QNLKRVTGVAFAASSATLYSTGAGDADVLEWDLRTGECSRRISGDKHGAS
ALALDPAESATLAVARTRIHLLDVASGERRKKIASGHAAAVTRMSFSDDG
GFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLALRAEPMSAE
ENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIAAATQVTG
PPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAP
SFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKT
LEAQDPASKKVATDGSSGLGNDEALQLATASRTSSNSEEEDEDAKTIGRR
LQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQALKSGDED
LLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPW
VRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLML
SQISKHGSGHQQALQDKDKAAIEVYVDRDSDEEDEDEDDENEIAGLEGEE
GESSVEEEVGKDDDDSDED*
back to top

protein sequence of NO12G02310.2

>NO12G02310.2-protein ID=NO12G02310.2-protein|Name=NO12G02310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=477bp
MSFSDDGGFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLALR
AEPMSAEENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIA
AATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALV
CGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKR
KRKEVKTLEAQDPASKKVATDGSSGLGNDEALQLATASRTSSNSEEEDED
AKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQA
LKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNR
AATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLM
GRLDLMLSQISKHGSGHQQALQDKDKAAIEVYVDRDSDEEDEDEDDENEI
AGLEGEEGESSVEEEVGKDDDDSDED*
back to top

protein sequence of NO12G02310.3

>NO12G02310.3-protein ID=NO12G02310.3-protein|Name=NO12G02310.3|organism=Nannochloropsis oceanica|type=polypeptide|length=477bp
MSFSDDGGFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLALR
AEPMSAEENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIA
AATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALV
CGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKR
KRKEVKTLEAQDPASKKVATDGSSGLGNDEALQLATASRTSSNSEEEDED
AKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQA
LKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNR
AATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLM
GRLDLMLSQISKHGSGHQQALQDKDKAAIEVYVDRDSDEEDEDEDDENEI
AGLEGEEGESSVEEEVGKDDDDSDED*
back to top
Synonyms
Publications