NO12G02310, NO12G02310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02310 vs. NCBI_GenBank
Match: EWM25816.1 (wd repeat-containing protein 43 [Nannochloropsis gaditana]) HSP 1 Score: 432.2 bits (1110), Expect = 2.100e-117 Identity = 239/424 (56.37%), Postives = 292/424 (68.87%), Query Frame = 0 Query: 1 MSFSDDGGFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLALRAEPMSAEENAAIVFTVLACCDTGTVRLLRQRWSPSQATRC--SDTANGTGIAAATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKTLEAQDPASKKVATD--GSSGLGNDEALQLATASRTSSXXXXXXXDAKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRA----GPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQISKHGSG 417 M+FS+DG FLATAS G+RH+N+F C+ K K EAV T +LDGCPT LALRA+P S E AIV T+LACCDTG+VR+LRQ W+ + A C + ++ G A PPT++ V+T KE+E +SAL ACFLPW G G +AWRV L G E AP F +FS A+G+ DELLP+V+L R +++ A KRKR+EVK +E QDPASK+ A D G SGL N + R + D T+GRRLQ + + L QG E GA+V V A G KADSL TVLSQALKSGDE+LLEQCL V D ++S TV+LL+APL P ++TLVRKLEKRPNRA +LCPW+RF+LLHHTSYL+ PGLDQRLAGLHK+ TRRVTVLPRLLGL GRL+LML+QISKHGSG Sbjct: 194 MAFSEDGHFLATASVGSRHINIFSCQGKDK--EAVLTAALDGCPTWLALRADP-SGREKGAIVLTLLACCDTGSVRVLRQSWAAAHAPPCDSAGSSEDAGALARAGTRAPPTTLRVLTVTDGKESEKVSALAACFLPWAGRKGSIAWRVGLAYGAESAPVFTSFSIASGEETDELLPRVLLEGSRLTSEKGKQEDGLASNKRKRREVKAVEMQDPASKRTALDEHGISGLNNAAGVGAMIEMRGDT------EDDDTMGRRLQKMAEGLSQG--LEGHGALVAAGPVATAAKSMGSKADSLFTVLSQALKSGDEELLEQCLAVQDTQILSKTVRLLTAPLVFPFINTLVRKLEKRPNRAVSLCPWIRFVLLHHTSYLIGTPGLDQRLAGLHKVATRRVTVLPRLLGLSGRLELMLAQISKHGSG 606
BLAST of NO12G02310 vs. NCBI_GenBank
Match: CBJ29131.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 134.4 bits (337), Expect = 9.100e-28 Identity = 138/423 (32.62%), Postives = 180/423 (42.55%), Query Frame = 0 Query: 1 MSFSDDGGFLATASQGARHVNVFD-CRDKKKNREAVATLSLDGCPTSLALRAEPMSAE--ENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIAAATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKTLEAQDPASKKVATDGSSGLGNDEALQLATASRTSSXXXXXXXDAKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQISKHGSGHQQA 421 +SFS DG +LA+++ AR NVFD + E V TL P L+L A S + + TV+A DTG V ++R R R +D G + S GR +E S+ + L G +P F SF G V G A +E GT K + + + V D +G G A XXXXXXX + R P+A+SL TVL+QAL+SGDE LLEQCL V D VI TV+ L + L + +V KLEKRPNRAA+L W+R LL H YLVSVPGL +LA LH+L+ RRV P+L+ L GRLDL+L++ S A Sbjct: 204 LSFSADGRYLASSASSARFANVFDVAASEVPPSEPVCTLGFAATPAFLSLHAASSSGXXGDVSTDQVTVVAGFDTGGVSVMRTR-------RQTDGKGGAVSKLDIRGAAGGPSSSPAALHGRLSSERPSS-----------------AILLATGSAASPGFVEASFEDEAGSLLSSSSVATAGGH-----ADGEEDEEGTGDKGGPAHVVGPGELGIRGVEKDSVAGEG-------ARXXXXXXXXXXXXXXXRAPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQPRAESLSTVLTQALQSGDESLLEQCLDVVDQGVIEATVERLPSSKVLQFLLRVVAKLEKRPNRAASLGRWIRALLSCHLGYLVSVPGLPDKLALLHQLIDRRVASFPKLIQLHGRLDLLLARAKAESSRRDAA 590
BLAST of NO12G02310 vs. NCBI_GenBank
Match: OQS03731.1 (hypothetical protein THRCLA_03969 [Thraustotheca clavata]) HSP 1 Score: 124.0 bits (310), Expect = 1.200e-24 Identity = 64/127 (50.39%), Postives = 88/127 (69.29%), Query Frame = 0 Query: 285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412 RA + SLVTVL QAL+S D LLE CL VHD VI T + LSA P + LV K EKRP R AT+C W+++L+L+HT+YL++VPG+ +L+GL++ + R+ V P+L L GRL+L+L QI+ Sbjct: 439 RAQASSSSLVTVLEQALQSKDSALLESCLRVHDIKVIDETCRRLSATKVFPFLLLLVEKFEKRPTRGATMCVWIKYLMLNHTAYLMTVPGVVDKLSGLYQSLDARLKVFPQLHKLNGRLNLVLGQIA 565
BLAST of NO12G02310 vs. NCBI_GenBank
Match: OQR86987.1 (hypothetical protein ACHHYP_09655 [Achlya hypogyna]) HSP 1 Score: 120.9 bits (302), Expect = 1.000e-23 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 0 Query: 285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412 +A + SLVTVL QALKS D LLE CL VHD VI T + LSA + LV K EKRP R ATLC W+++LLL+HT+YL++VP + ++L GL++ + R+ V P+L L GRL+L+L QI+ Sbjct: 435 QAQASSTSLVTVLEQALKSKDNALLENCLRVHDIKVIDETCRRLSATKVFAFIVLLVEKFEKRPTRGATLCVWIKYLLLNHTAYLMTVPNVVEQLTGLYQSLDSRLKVFPQLHKLNGRLNLVLGQIA 561
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_011270609.1 (hypothetical protein CAOG_08938 [Capsaspora owczarzaki ATCC 30864] >KJE95621.1 hypothetical protein CAOG_008938 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 120.2 bits (300), Expect = 1.800e-23 Identity = 64/127 (50.39%), Postives = 88/127 (69.29%), Query Frame = 0 Query: 285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412 RA PKA SLV +L QAL SGD LLE CL V + VI NT++ L A +P + +V K + +P+R TL W+R LLL HT+YL++VP L + L+GL++LV R++V +LL L GRLDL++SQI+ Sbjct: 471 RAPPKAHSLVQMLVQALHSGDNQLLEDCLSVSNEAVIRNTMKKLPASYVIPFLTLIVEKFQAKPSRGLTLLIWIRGLLLVHTAYLMTVPNLVEALSGLYQLVDARLSVFKKLLKLSGRLDLIISQIA 597
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_008604042.1 (hypothetical protein SDRG_00348 [Saprolegnia diclina VS20] >EQC42619.1 hypothetical protein SDRG_00348 [Saprolegnia diclina VS20]) HSP 1 Score: 120.2 bits (300), Expect = 1.800e-23 Identity = 63/119 (52.94%), Postives = 84/119 (70.59%), Query Frame = 0 Query: 293 LVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412 LV+VL QAL+S D LLE CL VHD VI T + LS P V LV KLEKRP R ATLC W+++LLL+HT+YL++VP + +L+GL++ + R+TV P+L L GRL+L+L QI+ Sbjct: 445 LVSVLEQALQSKDNVLLENCLRVHDLKVIDETCRRLSPTKVFPFVLLLVEKLEKRPTRGATLCLWIKYLLLNHTAYLMTVPDVVDKLSGLYQALDARLTVFPQLHKLNGRLNLVLGQIA 563
BLAST of NO12G02310 vs. NCBI_GenBank
Match: ORY95318.1 (WD40-repeat-containing domain protein [Syncephalastrum racemosum]) HSP 1 Score: 119.8 bits (299), Expect = 2.300e-23 Identity = 118/411 (28.71%), Postives = 179/411 (43.55%), Query Frame = 0 Query: 1 MSFSDDGGFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLAL-RAEPMSAEENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIAAATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKTLEAQDPASKKVATDGSSGLGNDEALQLATASRTSSXXXXXXXDAKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQI 411 ++FS L + ++ R+VNV+D + N + L+L+ T + +EP TVLA + G V L R + SQAT S I T T V + E+ I L+A F+ D G + + G PSFE + D L V+ N+ E K RK+ D +S KV A A + T +I +LQ + + E G + +G P A SL TVL+QAL + D LLE CL + VI TVQ + +PL++ L+ + ++ PNRA+ L W+R +L+ HT+YL++VP L +L+G ++ + R++V P+LL L GRLDL+ +QI Sbjct: 224 LAFSRQDDILVSIAEDDRYVNVWDAQSTNNNTTTLTVLTLEDNATHVDFSSSEP-----------TVLAVAEDGVVGLWRN--ASSQATPTSRRKAARSITRQTDST-------VKVVSSKAEDTVIPILSATFVS-DNYG----QSIMIARGSSVRPSFEAVRYVNESTGDVLSDIVLTRQPAGNLLINDESAAVESVKASRKQ------YDESSVKVV----------GATDFAIQNPTMKEDVEMAEPDMSIEEKLQEMHVE-ENGTQPSTKRKADKG-----LVPSAGSLQTVLTQALHANDRALLEACLEHNKPEVIQTTVQRVPTAYIIPLLNELIARFQESPNRASRLMVWIRIVLMVHTTYLMTVPDLVYKLSGFYQALDVRLSVFPKLLALQGRLDLIQNQI 587
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_012212651.1 (hypothetical protein SPRG_17862, partial [Saprolegnia parasitica CBS 223.65] >KDO16640.1 hypothetical protein SPRG_17862, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 0 Query: 285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412 +A + SLV+VL QAL+S D LLE CL VHD VI T + LS P V LV KLEKRP R AT+C W+++LLL+HT+YL++VP + +L+GL++ + R+ V P+L L GRL+L+L QI+ Sbjct: 89 KAQASSTSLVSVLEQALQSKDNVLLENCLRVHDLKVIDETCRRLSPTKVFPFVLLLVEKLEKRPTRGATMCVWIKYLLLNHTAYLMTVPDVVDKLSGLYQSLDARLKVFPQLHKLNGRLNLVLGQIA 215
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_012206923.1 (hypothetical protein SPRG_11352 [Saprolegnia parasitica CBS 223.65] >KDO22400.1 hypothetical protein SPRG_11352 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 0 Query: 285 RAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS 412 +A + SLV+VL QAL+S D LLE CL VHD VI T + LS P V LV KLEKRP R AT+C W+++LLL+HT+YL++VP + +L+GL++ + R+ V P+L L GRL+L+L QI+ Sbjct: 432 KAQASSTSLVSVLEQALQSKDNVLLENCLRVHDLKVIDETCRRLSPTKVFPFVLLLVEKLEKRPTRGATMCVWIKYLLLNHTAYLMTVPDVVDKLSGLYQSLDARLKVFPQLHKLNGRLNLVLGQIA 558
BLAST of NO12G02310 vs. NCBI_GenBank
Match: XP_016610083.1 (hypothetical protein SPPG_02548 [Spizellomyces punctatus DAOM BR117] >KND02044.1 hypothetical protein SPPG_02548 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23 Identity = 117/426 (27.46%), Postives = 189/426 (44.37%), Query Frame = 0 Query: 1 MSFSDDGGFLATASQGARHVNVFDCRDKKKNREAVATLSLDGCPTSLALRAEPMSAEENAAIVFTVLACCDTGTVRLLRQRWSPSQATRCSDTANGTGIAAATQVTGPPTSMYVVTAEGRKENENISALTACFLPWDGDGGPLAWRVALVCGPECAPSFETFSFATGKGVDELLPKVVLGDGRNNVRTAGEDETSAGTKRKRKEVKTLEAQDPASKKVATDGSSGLGNDEALQLATASRTSSXXXXXXXDAKTIGRRLQTITKDLEQGRCREHEGAMVEGAGVRRAGPKADSLVTVLSQALKSGDEDLLEQCLGVHDAHVISNTVQLLSAPLTLPLVDTLVRKLEKRPNRAATLCPWVRFLLLHHTSYLVSVPGLDQRLAGLHKLVTRRVTVLPRLLGLMGRLDLMLSQIS--KHGSGHQQALQDK 425 + FS F TA++ RH++V+D + + V +L++D PT++A+ VLA + G V L + T + +A Q + +V++ + E + LTA F ++ G P FE + + +G +++ K L R V + DE A + +K++KT +D V G++ L D +A + + T+ RL + A G P A+SL +LSQA+ + D LLEQ L VHD ++I TV+ L LPL+D L+ +L++RPNRA L WVR ++L H YL+SVP L L L++ + R +V +LL L GRLDL++SQI+ H + + +D+ Sbjct: 235 IQFSPSDSFCVTAAEDDRHISVWD-TGLEGTSDHVTSLTMDSAPTNIAISGGNQ-----------VLALTEEGIVYLWDKVDQKDGTTPVKKKKKQSNLARPAQGV-----LSIVSSSDKDAKERLPILTATFSD---------EKILFARGNVVKPIFERVEYLSDEG--KIIEKTTL--SRKPVTSLLIDE-EALVDQAQKDLKTRYKED----DVLVLGAADLPADSNTMMADPDMLTRDEQAALKE-PTLEERLSALVV----------TPASEAKPGKPARPPTANSLHQMLSQAIHTNDVQLLEQALQVHDTNMIVATVRRLPPSQVLPLLDQLMLRLQRRPNRARELIEWVRAVVLVHAGYLMSVPNLAANLGALYQTIDSRASVFQKLLRLSGRLDLVVSQIALRNHAGANGEVQEDE 614 The following BLAST results are available for this feature:
BLAST of NO12G02310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02310 ID=NO12G02310|Name=NO12G02310|organism=Nannochloropsis oceanica|type=gene|length=3060bpback to top protein sequence of NO12G02310.1 >NO12G02310.1-protein ID=NO12G02310.1-protein|Name=NO12G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=670bpback to top protein sequence of NO12G02310.2 >NO12G02310.2-protein ID=NO12G02310.2-protein|Name=NO12G02310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=477bpback to top protein sequence of NO12G02310.3 >NO12G02310.3-protein ID=NO12G02310.3-protein|Name=NO12G02310.3|organism=Nannochloropsis oceanica|type=polypeptide|length=477bpback to top Synonyms
Publications
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