NO11G03480, NO11G03480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G03480 vs. NCBI_GenBank
Match: EWM24841.1 (Leucine carboxyl methyltransferase, partial [Nannochloropsis gaditana]) HSP 1 Score: 209.5 bits (532), Expect = 2.800e-50 Identity = 134/295 (45.42%), Postives = 176/295 (59.66%), Query Frame = 0 Query: 10 AVTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFL--AGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLEGAK--------KGG--KXXXXXXLGGGMDGLLIALCANNM-ASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGKEDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIE--------------------EEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLEGWQSR 272 A++RTADTAALCKWS+ RHGYL S LP +T+ LLA L A AGPS +RASPL+H CY RA+A++R VQ+FLE + KGG + LGGGMDGL++ALCA A+ V ++E+D PEVV RKE L AW +EGG+E V F+R++G Y L+ DLR+ + + + +V E + E E ++LFILEAVLGY++ EV+ LL L + S SLL++DTGR + L DAVAA V AAF RG + GL GW+ R Sbjct: 13 AISRTADTAALCKWSMARHGYLHSVAHVLPSDTIPLLASLAEASAGPSGYSSFRASPLLHWCYATRASAVLRAVQTFLEDKEGDANRRLDKGGRLRERLVVVLGGGMDGLVLALCARAAEATGVGVKVVELDAPEVVARKEGVLGAW----REGGREGAVREFLRQTGSYRLEAVDLREGGRVGEVVGEVVREGGGAGREGEAPPDGDGSKGGGQGEVEPQVLFILEAVLGYMRLQEVKILLSTLPMVAPSSSLLIIDTGRTSALKNDDAVAAAVDAAFEARGCSLTGLAGWKDR 303
BLAST of NO11G03480 vs. NCBI_GenBank
Match: XP_006994121.1 (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Peromyscus maniculatus bairdii]) HSP 1 Score: 76.6 bits (187), Expect = 2.900e-10 Identity = 87/282 (30.85%), Postives = 125/282 (44.33%), Query Frame = 0 Query: 10 AVTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLE--GAKKGGKXXXXXXLGGGMDGLLIALCANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGK---EDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLEGWQSRRDVQGALRAW---GW 284 AV T D++AL K SL HGY+ AF A L G P R +PLVHR Y +RA A+ V++FL+ GA LG G D L L A + + ++ E+D P+V RK +R E G D A ES Y + ADLR+L L +AL+ + + L + EAVL YL+P L+ + + F +L V+ + +DA + F + SP+ GLE + DV+ +R + GW Sbjct: 12 AVQSTNDSSALSKRSLAAHGYVRDAF-----------AALLVPG-----PVRRTPLVHRGYYVRARAVRHCVRAFLQRTGALPAPTRAQILSLGAGSDSLYFRLKAAGLLAR--AAVWEVDFPDVSRRKAERIRETPELCSLTGPFQIGDSASALCFESSDYRILGADLRELPRLGEALDGAGL----DATSPTLLLAEAVLTYLEPPGAAALIAW-AAQRFPDALFVI----YEQMKPRDAFGQVMLQHFERLRSPLHGLELFP---DVEAQVRRFLGAGW 263
BLAST of NO11G03480 vs. NCBI_GenBank
Match: XP_007621682.1 (PREDICTED: tRNA wybutosine-synthesizing protein 4 isoform X3 [Cricetulus griseus] >XP_016824467.1 PREDICTED: tRNA wybutosine-synthesizing protein 4 isoform X2 [Cricetulus griseus]) HSP 1 Score: 74.7 bits (182), Expect = 1.100e-9 Identity = 86/279 (30.82%), Postives = 123/279 (44.09%), Query Frame = 0 Query: 11 VTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLE--GAKKGGKXXXXXXLGGGMDGLLIALCANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGK---EDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLEGWQS-RRDVQGALRAWGW 284 V T D++AL K SL HGY+ AF A L G P R +PL+HR Y +RA A+ V++FL+ GA LG G D L L A + + ++ E+D P+V RK +R E G D A ES Y + ADLR+L L +AL+ + + L + EAVL YL+P L+ + + F +L V+ + +DA + F + SP+ GLE + VQ L+A GW Sbjct: 13 VQSTNDSSALSKRSLAAHGYVRDAF-----------AALLAPG-----PVRRTPLIHRGYYVRARAVRHCVRAFLQRTGALPAPARAQILSLGSGSDSLYFRLKAAGLLAR--TAVWEVDFPDVSRRKAERIRDVPELCSLTGPFQVGDSASALCFESSDYRILGADLRELPRLGEALDCAGL----DATSPTLLLAEAVLTYLEPAGAAALIAW-AAQRFPDALFVI----YEQMKPRDAFGQIMLQHFGRLHSPLHGLELFPDVEAQVQRFLQA-GW 263
BLAST of NO11G03480 vs. NCBI_GenBank
Match: OBS60400.1 (hypothetical protein A6R68_08479 [Neotoma lepida]) HSP 1 Score: 73.9 bits (180), Expect = 1.900e-9 Identity = 85/279 (30.47%), Postives = 123/279 (44.09%), Query Frame = 0 Query: 11 VTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLE--GAKKGGKXXXXXXLGGGMDGLLIALCANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGK---EDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLEGWQS-RRDVQGALRAWGW 284 V T D++AL K SL HGY+ AF A L GP+ R +PL+HR Y +RA A+ V++FL+ GA LG G D L L A + + ++ E+D P+V RK + E G D A ES Y + ADLR+L L +AL+ + + L + EAVL YL+P L+ + + F +L V+ + +DA + F + SP+ GLE + VQ L+A GW Sbjct: 13 VQSTNDSSALSKRSLAAHGYVRDAF-----------AALLVPGPA-----RRTPLIHRGYYVRARAVRHCVRAFLQRTGALPAATRAQILSLGAGSDSLYFRLKAAGLLAR--AAVWEVDFPDVSRRKAERIGEIPELCSLTGPFQIGDSASALCFESSDYRILGADLRELXRLGEALDSAGL----DATSPTLLLAEAVLTYLEPAGAAALIAW-AAQRFPDALFVI----YEQMKPRDAFGQVMLQHFRRLHSPLHGLELFPDVEAQVQRFLQA-GW 263
BLAST of NO11G03480 vs. NCBI_GenBank
Match: XP_005068566.1 (tRNA wybutosine-synthesizing protein 4 [Mesocricetus auratus]) HSP 1 Score: 73.6 bits (179), Expect = 2.400e-9 Identity = 85/279 (30.47%), Postives = 123/279 (44.09%), Query Frame = 0 Query: 11 VTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLE--GAKKGGKXXXXXXLGGGMDGLLIALCANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGK---EDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLEGWQS-RRDVQGALRAWGW 284 V T D++AL K SL HGY++ AF A L G P R +PL+HR Y +RA A+ V++FL+ GA LG G D L L A + + ++ E+D P+V RK +R E G D A ES Y + ADLR+L L + L+ + + L + EAVL YL+P L+ + + F +L V+ + +DA + F + SP+ GLE + VQ L+A GW Sbjct: 13 VQSTNDSSALSKRSLAAHGYVSDAF-----------AALLAPG-----PVRRTPLIHRGYYVRARAVRHCVRAFLQRTGALPAPTRAQILSLGAGSDSLYFRLKAAGLLAR--TAVWEVDFPDVSRRKAERIRDVPELCSLTGPFQIGDSASALCFESSDYRILGADLRELPRLGEVLDCAGL----DAASPTLLLAEAVLTYLEPAGAAALIAW-AAQRFPDALFVI----YEQMKPRDAFGQIMLQHFRRLHSPLHGLELFPDVEAQVQRFLQA-GW 263
BLAST of NO11G03480 vs. NCBI_GenBank
Match: XP_024586858.1 (leucine carboxyl methyltransferase 2-like [Plasmopara halstedii] >CEG50489.1 leucine carboxyl methyltransferase 2-like [Plasmopara halstedii]) HSP 1 Score: 73.6 bits (179), Expect = 2.400e-9 Identity = 128/519 (24.66%), Postives = 187/519 (36.03%), Query Frame = 0 Query: 11 VTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLEGAKKGGKXXXXXXLGGGMDGLLIALCANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGK--EDLVGAFMRES----------GKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAG-------------LAGKDAVAAGVKAAFAKRGSPIEGLEGWQSRRDVQGALRAWG-WRG--RMTVQTLWEATNGRRXXXXXXXXXXXXXXXXXXXXXXXYAAWHLFAHQ-------SWCIHASSSPCASSKLPSVSC------SPSLSIRPYRPQTTDHASVAALIEEGREDAKVGRPGVASFVARALSKDMKLLEKRRYA-----------GRFWIAEEKGQGEEGGVVVVGCVGLRVSTKKEGGREGEVVRLSVGKEWRGRGVGLRLLKYVEKVA 478 VT TA A CK S V GY +F E P R PL+HR Y LR AI R V+ F K + LG G D L L A + +S E+D +V K+ L R + K DL A E Y+L DL D++ LN + + ++ L + E VL YL P + LL++L+ T S S+ V D + G + G DA ++ ++ FA +G + G G+++ D A+ W + + +++ A YA + ++ W S L + +C S + IR + Q D A+V +L E + V FV + L + + A FW+AE G +VGCVGL+ + R E+ RLSV R RGV L+KY E A Sbjct: 10 VTETAFDAIKCKASAVTLGYYNDSFLRFFVE----------------KPTRRIPLIHRGYYLRHVAIARCVELFFSQYKMSTR-INIVSLGAGFDTLFFRLLAQRQFTGS-ISFTEVDCNAIVDAKKVLLNDKQVRAQLFQKYANDLTVAESMEDNVAWQCHVSCATYSLIACDLGDIQRLNSSFKTAGVDRNL----PTLILAECVLSYLAPEKGTELLQWLAATFPSGSIAVYDPIALQGGSEKNNEQSDRETIEGSDAFSSTLQRYFAVKGCSLRGATGYRTAADHARRFLAFAHWHNCRILDMNSVFAACTSVEEKRRIASLEPFDEYADWVLCNAHYAIYLADNNKRLSENDGEWTSQFVSRAYQHRYLLTSTCVLQQQESQPVIIRTF--QNEDLAAVRSLFENTHLEFARNSRAVREFVVKRLRGPVGDMYDVHRAFQIPASTGISNSGFWVAELSG-------AIVGCVGLKPIAGDQ--RAAELCRLSVSSAVRRRGVASALVKYAEAFA 495
BLAST of NO11G03480 vs. NCBI_GenBank
Match: XP_006201843.1 (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Vicugna pacos]) HSP 1 Score: 72.8 bits (177), Expect = 4.100e-9 Identity = 82/280 (29.29%), Postives = 121/280 (43.21%), Query Frame = 0 Query: 10 AVTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLEG--AKKGGKXXXXXXLGGGMDGLLIAL-CANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGG---KEDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLEGWQSRRDVQGALRAWGW 284 AV T D++AL K SL GY+ AF L + GA R +PL+HR Y +RA A+ V++FLEG A G LG G D L L A ++A + ++ E+D P+V RK +R E G D ES Y + DLR L+ L++AL + + L + EAVL YL+P L+ + + FS ++ V+ + DA ++ F + SP+ GL+ + Q GW Sbjct: 12 AVQSTNDSSALSKSSLAARGYVQDAFAAL---------LVPGAA-------RRTPLIHRGYYVRARAVRHCVRAFLEGACAFPGAPRAQILSLGAGSDSLYFRLKTAGHLA---VAAVWEVDFPDVARRKAERIRDTPELLALTGPFQSWDPTSTLCFESSDYRILGLDLRQLQRLDQALSAAGL----DAAAPTLLLAEAVLTYLEPANAAALIAW-AAQRFSSAIFVI----YEQMRPHDAFGQFMQQHFRQLNSPLHGLDHFPDVEAQQQRFLQAGW 263
BLAST of NO11G03480 vs. NCBI_GenBank
Match: XP_005364383.1 (PREDICTED: tRNA wybutosine-synthesizing protein 4 [Microtus ochrogaster]) HSP 1 Score: 72.4 bits (176), Expect = 5.400e-9 Identity = 86/279 (30.82%), Postives = 123/279 (44.09%), Query Frame = 0 Query: 11 VTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLE--GAKKGGKXXXXXXLGGGMDGLLIALCANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGK---EDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLEGWQS-RRDVQGALRAWGW 284 V T D++AL K SL HGY+ AF A L G P R +PLVHR Y +RA A+ V++FL+ GA LG G D L L A + + ++ E+D P+V K +R E G D A ES Y + ADLR+L L +AL+ + + L + EAVL YL+P + L+ + + F +L V+ + +DA + F + SP+ GLE + VQ L+A GW Sbjct: 53 VQSTNDSSALSKRSLAAHGYVRDAF-----------AALLVPG-----PVRRTPLVHRGYYVRARAVRHCVRAFLQRTGALPAPTRAQVLSLGAGSDSLYFRLKAAGLLAR--AAVWEVDFPDVSRSKAERIREIPELCSLTGPFQLGDSSSALCFESSDYRILGADLRELPKLGEALDCAGL----DATAPTLLLAEAVLTYLEPADAAALIAW-AAQRFPDALFVI----YEQMKPRDAFGQIMLQHFRRLHSPLHGLELFPDVEAQVQRFLQA-GW 303
BLAST of NO11G03480 vs. NCBI_GenBank
Match: XP_021048314.1 (tRNA wybutosine-synthesizing protein 4 [Mus pahari]) HSP 1 Score: 72.0 bits (175), Expect = 7.000e-9 Identity = 78/261 (29.89%), Postives = 114/261 (43.68%), Query Frame = 0 Query: 11 VTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLE--GAKKGGKXXXXXXLGGGMDGLLIALCANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGK---EDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLE 267 V T D+++L K SL HGY+ F A L G P R +PL+HR Y +RA A+ V++FLE GA LG G D L L A + + ++ E+D P+V K + E + G D ES Y + ADLR+L+ L +AL+ ++ L + EAVL YL+P+ L+ + + FS +L V+ G DA + F + SP+ GLE Sbjct: 13 VQSTNDSSSLSKRSLAAHGYVRDPF-----------AALLVPG-----PVRRTPLIHRGYYVRARAVRHGVRAFLELTGALPSPTRAQILSLGSGSDSLYFRLKAAGLLAR--AAVWEVDFPDVSRLKAKRIEETPELRAQTGPFKIGDSASTLCFESADYRILGADLRELQRLGEALDGAGLDV----TSPTLLLAEAVLTYLEPSSAAALIAW-AAQRFSDALFVIYEQMRPG----DAFGQIMLQHFRRLHSPLHGLE 246
BLAST of NO11G03480 vs. NCBI_GenBank
Match: XP_021005071.1 (tRNA wybutosine-synthesizing protein 4 [Mus caroli]) HSP 1 Score: 72.0 bits (175), Expect = 7.000e-9 Identity = 77/261 (29.50%), Postives = 114/261 (43.68%), Query Frame = 0 Query: 11 VTRTADTAALCKWSLVRHGYLASAFFNLPPETLSLLAFLAGAGPSSSPPYRASPLVHRCYTLRATAIMRQVQSFLE--GAKKGGKXXXXXXLGGGMDGLLIALCANNMASNKMVSLLEIDVPEVVTRKEAALRAWMERGKEGGK---EDLVGAFMRESGKYALKVADLRDLESLNKALEKVEIEEEKEGEEEMLFILEAVLGYLQPNEVERLLRFLSTTSFSCSLLVVDTGRVAGLAGKDAVAAGVKAAFAKRGSPIEGLE 267 V T D+++L K SL HGY+ F A L G P R +PL+HR Y +RA A+ V++FLE A LG G D L L A + + ++ E+D P+V K + E + G DL + ES Y + ADLR+L+ L +AL+ + + L + EAVL YL+P+ L+ + + F +L V+ G DA + F + SP+ GLE Sbjct: 13 VQSTNDSSSLSKRSLAAHGYVRDPF-----------AALLVPG-----PVRRTPLIHRGYYVRARAVRHCVRAFLELTSALPSRTRAQILSLGSGSDSLYFRLKAAGLLAR--AAVWEVDFPDVSRLKAERIEETPELRAQTGPFKIGDLASSLCFESADYRILGADLRELQRLGEALDGAGL----DATSPTLLLAEAVLTYLEPSSATALIAW-AAQRFPDALFVIYEQMQPG----DAFGQIMLQHFRRLHSPLHGLE 246 The following BLAST results are available for this feature:
BLAST of NO11G03480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03480 ID=NO11G03480|Name=NO11G03480|organism=Nannochloropsis oceanica|type=gene|length=2444bpback to top protein sequence of NO11G03480.1 >NO11G03480.1-protein ID=NO11G03480.1-protein|Name=NO11G03480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=526bpback to top protein sequence of NO11G03480.2 >NO11G03480.2-protein ID=NO11G03480.2-protein|Name=NO11G03480.2|organism=Nannochloropsis oceanica|type=polypeptide|length=603bpback to top Synonyms
Publications
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