NO11G01640, NO11G01640 (gene) Nannochloropsis oceanica

Overview
NameNO11G01640
Unique NameNO11G01640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4051
Alignment locationchr11:542086..546136 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:542086..546136 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01640.1NO11G01640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591233gene_5049Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01640.1NO11G01640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01640 ID=NO11G01640|Name=NO11G01640|organism=Nannochloropsis oceanica|type=gene|length=4051bp
TTCCATCAGCAGCAGCACCACCGCTCTTTGTGCCCCTAAGGGAGGCTTGA
CCTTTTTCACAGCCCACAGTGCGCTTGGGGACCAAAGCTTGATGGAGGGC
CTTCAGGCGCTCCTTGGCGGAGCTTTAAGTGTGGGGCTTCCTTTTGGAGG
GTTCGCTACGCGAGGTGCCAATGTGCCCCTTCCACTAGCAACTGCCTCCA
CAGAGGGTGTTCCCAGAGGGCAGCACCTACACTCATATAGAAGTATCGCA
TGCAACCTGACGTCCTCTAGGACTTACAAGGGGGGAGTCCCTCAACAATA
AAATGTTGCCTATTCACCCCTTATTCTTGTCCGAGTTTTCCAGCGACTTT
GACAGGTTTTTATCAGGCAAAGTTCCCGGACGTCCGCCAGTCAAAGTCGC
TAGTAAAACTCGGACAAGGAATAAGGGGTGAATATGCAACAATTTCTTTT
TGGAAGGCTCCTCCTCGTATGCAAGTCCTAGAGGACACAGGTTGCATGCG
ATAGTTCTAGAGGGATGTAGGAAGGAAGGAACTATATACTATACTACGGT
ACTCGGATAGATAGTAGTATAGGACACTGTCACTGGCATCACCGCTTTGT
TCCCCCCCTGGAGGACGTGATGCTCTTTGCTGTTGGTTACAAAGCAAACC
TGGGGTATGACAGGGGTTGAGACTTTCTCTCGAGTGTCTTTTAGAAAGGA
GACCCACACTAAAGAGTAGAGGGGGTCTATCCACCGCGAAAACCTTGACG
GTAAAATTCACGCCCACTTCCCACAATTTGTTCTTTTCTCGCACTTTGAG
GCTCGTTATTTGGTGTGTGTACAACCACGACAGACAATCAACCTCTAAAT
CTGTCTTTCCACCTATAAATGTACAGGTTTTCAAGGGTGGATGCTCCACA
TGCTCGCAAGGGGGGAGATTTGACGGGCCAACAGTCTGATCCCCCCATCA
TCAACCAACGAGTAATGGGTGATGGGCTACCCTCCCGCAAGCGCCTTGCG
GCCACTTTTACAGCGGACGTCTTGTCCCTCTCGGAAAGGGTAGTTAAAAT
AAAAAGCCAAGAGCTTCCATCGTGACACCACCGACATAATAAAAAAAACT
TCATACGCACATGGAGTATATACATATATAGGCGATATATTTAGGCGAGT
GGGGGAGCTCGATGCAGATCACATGACTCAGCGACTGTCTTCTAGATGCT
TGCTGATTACATGTACGAGGAGTGGAGGAAGGCACGTGTTGGGGCCTTTT
ACCGCCCCTCTCCTCCCGCAAGGTGGAAGGAGATGCCAGCTCAGgtaagt
ttttttttattcttaatttttccttattattatttttaatggttattcat
ttgtttgccatttaatttttacggccgcccactccttactcatgccctcc
cctggtttttacatagACAGCTCAGTGAAACGCTTTATGTGGCTGGTGGG
CTCCTTGACAAGATCTGGAAGGCGGCACGCCGAAAGGAAGGGGAGGAAGG
GGATTGCGCGAGGCGGCGTCATCGCAAGCATTAGATTGGGGAGAATCACT
CCCGGAGGCTTGGCCCTTTCTTCGAGAGGGTGGCTGCTACAAGCCAGAAA
GGAGTCATGTTTTCCTCTCCGTTATGGTATGCGTATTTTACTTGTATGGA
GGTGGTTTTGATGAACCTCATTTCTATTGATTTTTTAATCCACGTGGGGC
AGGATGTTGAGAAGGGTGGGATGTGGACTGCAGCGCTTGAGAAGATCTGC
ATGGATGAGGGGGTGACAAATGCATGGAAAGCTCGCATGCAGAAGATATT
AGCATACCGTGTAGACGTACCTGCAGATGCGGTTGAAGGATGGTGCCGGC
TCCATCCTTGCATCTCTCCTCCTGCGTCTCGGAAATTCGATCCGCCCCGG
CCTCCGCACTATCGGCAAGATAGCGAAAGAGCGTGCGGAGAAGGAGAAGA
GGGCGAGTCGAATGTCCATCTCGAGGTTTTTACCCGTAGAGGGCACGGCC
GTCGAGTACGCATGTTTACTCACGAGTCACTATGCCACCTTGGTGGCAAA
TATTCTCACGATGGATCTGGCAAATGTGCGTGGAGTAGCATCTGAATTAG
GTTTGCATTTAGCCACAGGTACGATACATGAGGGATGGCGGGAAAGGCGT
CCCGAAGATAAAACCACCTTGGAGGATTTGATAGACCTTGAGAGCACCGT
GCCGTGTGCGCCACTTCTCAAGGGGGGCCTAAAGCCGTCCTTTCAAATTA
AAAATTTAGGGGATTTTGATGGAAAGATTGGAGGGAGGGTGCGAGTGTAT
CTTCGACGGGGCCGGATCACTTGATCCCATCAGTTGCAAACGCTGGATTG
TTGCCTTCCAGAGACGGCTTCAGAAAACAAGGGGTGCGAGCAGTTAGCTC
GAAATCAATGCAGAGGATACCGCATTGCATGGTAGTTGTAGTCGAAATAT
TGAGTGGGAACCTTTTGGGGTGGGCATGCGCCAAACGGAATTCGACAGCT
GCGCCAAAGAGGGGGGGCGAATGGAATGCGGGTGCAATGGCGCGGGACGG
AAATGGAACTGCTTATCGCCATGCCGTACAAAAGACAAGCGGTCGCGCCT
GTGCTTGCTACTGGACACGACTCCTGAACTTTCAGCTGTATACTCGTCAT
ACGTTGAACCACAGCTGAAGTGCGTGTATTTAATTTTGAACGATGAGGGT
AAAACGCTGACGTTGGTCCGCTTCCAGCGGAGTAGTATCGAGGATGTCGC
CTTCTCACACGCATGTCTGTGGGGACTGTTATGGAGTGAAGGTCCATTCC
ACGGCGGATTCGGGCTCTCAATGCGGCTCTCGTGGGCAGTGTCGTCGAGA
AAACCGTGGACGCACACGAGGAACTGGAGGCCGTGGAAGCTGAGGAAGCA
AGATGCCGCTCCCTCCACCTATGTCGAGGTTATCATTGGTCGACTGGCCT
TTTAGTAATTACAAGCTTCGAGATATCTACTGCGATGCCCGTTTAGACTG
TCGGAGTCGTCAAACGCTTGCTGTAGACTTTGTCAAGAAGATGACAGGAT
TGTCGCCAAAAACGGCATCATACATGATGATGAGCCTTGCGTGCGCTCGA
CCGCTGCCTCTTATGCCTCGGTTGTTGGGGGTCTGCAGGTGGTGCGAGAT
TTTGCGGAATCTGATCTCGACAAGACTTCATTTGGGCAAATACACGTGGC
CGGCTATGCGTATGCACATGGGCACAAAATGATTCGATAAATGGAAAAGG
AGAAGGCGCAGTATCTGCAATGCAGAAAATTTTGGATGATAAGCATTTAA
GATTGTATGCTAATTCGAAGGAATTTGCTGGCCTTAAAAATGGCCAGTTA
CATGGAGAAATGGCGAGATGATCTGTTGAAAATAGATGACGTGACGAAAA
CCAATTTGAGCGAGCATTTCTTCACTAGTAAGGCGTGCGAGGACTTCGTC
ATGGGTATGCGGGGAATGGTGGGGTTTGTGCGAATGTGTTGTACGGAAAA
GGGTTATGTACTACCGCACATGCTTTCTTAGGACCATATAGAAGATCTGT
TTGGTATTATGAAAGGGCTTCCGCGGAAAGGAACGCTGACGGCCGAGAAA
AGGGAAGAGGTGTCTCGGACTACTTTTATCTAAAAAAGTTTGACGATGTT
CAAATCATCGGCCGGTTTTAACGTGGCCGGACGGCCCCTGATGGACACAC
ACACCGGATACACATGACGAAGTCCTCGTACGCCTTACTAGTAAAGAAAT
GCTCGCTCAAATTGGTTTTCGTCACGTCATCTATTTTCAACAGATCATCT
CGCCATTTCTCCATGTAACTGGCCATTTTTAAGGCCAGCAAATTCCTTCG
AATTAGCATACAATCTTAAATGCTTATTATCCAAAATTTTGCGCACCTTC
TTTTCTCCGAACGTGTGATATGCCGACACATCTCAGAAGAGGGTTAGATC
AATCTGATTCTTCGAATTCACCCCAAGAGATCTCACACACCGCTGACTCT
TATCCGAGGAAGAATGGCCAACAGCCTATCCGGAAAGCAAACCGTTCTCA
A
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protein sequence of NO11G01640.1

>NO11G01640.1-protein ID=NO11G01640.1-protein|Name=NO11G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=166bp
MRLKDGAGSILASLLLRLGNSIRPGLRTIGKIAKERAEKEKRASRMSISR
FLPVEGTAVEYACLLTSHYATLVANILTMDLANVRGVASELGLHLATGTI
HEGWRERRPEDKTTLEDLIDLESTVPCAPLLKGGLKPSFQIKNLGDFDGK
IGGRVRVYLRRGRIT*
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Synonyms
Publications