|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr11 | genome | chr11:542086..546136 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO11G01640.1 ID=NO11G01640.1|Name=NO11G01640.1|organism=Nannochloropsis oceanica|type=mRNA|length=3929bp TTCCATCAGCAGCAGCACCACCGCTCTTTGTGCCCCTAAGGGAGGCTTGA CCTTTTTCACAGCCCACAGTGCGCTTGGGGACCAAAGCTTGATGGAGGGC CTTCAGGCGCTCCTTGGCGGAGCTTTAAGTGTGGGGCTTCCTTTTGGAGG GTTCGCTACGCGAGGTGCCAATGTGCCCCTTCCACTAGCAACTGCCTCCA CAGAGGGTGTTCCCAGAGGGCAGCACCTACACTCATATAGAAGTATCGCA TGCAACCTGACGTCCTCTAGGACTTACAAGGGGGGAGTCCCTCAACAATA AAATGTTGCCTATTCACCCCTTATTCTTGTCCGAGTTTTCCAGCGACTTT GACAGGTTTTTATCAGGCAAAGTTCCCGGACGTCCGCCAGTCAAAGTCGC TAGTAAAACTCGGACAAGGAATAAGGGGTGAATATGCAACAATTTCTTTT TGGAAGGCTCCTCCTCGTATGCAAGTCCTAGAGGACACAGGTTGCATGCG ATAGTTCTAGAGGGATGTAGGAAGGAAGGAACTATATACTATACTACGGT ACTCGGATAGATAGTAGTATAGGACACTGTCACTGGCATCACCGCTTTGT TCCCCCCCTGGAGGACGTGATGCTCTTTGCTGTTGGTTACAAAGCAAACC TGGGGTATGACAGGGGTTGAGACTTTCTCTCGAGTGTCTTTTAGAAAGGA GACCCACACTAAAGAGTAGAGGGGGTCTATCCACCGCGAAAACCTTGACG GTAAAATTCACGCCCACTTCCCACAATTTGTTCTTTTCTCGCACTTTGAG GCTCGTTATTTGGTGTGTGTACAACCACGACAGACAATCAACCTCTAAAT CTGTCTTTCCACCTATAAATGTACAGGTTTTCAAGGGTGGATGCTCCACA TGCTCGCAAGGGGGGAGATTTGACGGGCCAACAGTCTGATCCCCCCATCA TCAACCAACGAGTAATGGGTGATGGGCTACCCTCCCGCAAGCGCCTTGCG GCCACTTTTACAGCGGACGTCTTGTCCCTCTCGGAAAGGGTAGTTAAAAT AAAAAGCCAAGAGCTTCCATCGTGACACCACCGACATAATAAAAAAAACT TCATACGCACATGGAGTATATACATATATAGGCGATATATTTAGGCGAGT GGGGGAGCTCGATGCAGATCACATGACTCAGCGACTGTCTTCTAGATGCT TGCTGATTACATGTACGAGGAGTGGAGGAAGGCACGTGTTGGGGCCTTTT ACCGCCCCTCTCCTCCCGCAAGGTGGAAGGAGATGCCAGCTCAGACAGCT CAGTGAAACGCTTTATGTGGCTGGTGGGCTCCTTGACAAGATCTGGAAGG CGGCACGCCGAAAGGAAGGGGAGGAAGGGGATTGCGCGAGGCGGCGTCAT CGCAAGCATTAGATTGGGGAGAATCACTCCCGGAGGCTTGGCCCTTTCTT CGAGAGGGTGGCTGCTACAAGCCAGAAAGGAGTCATGTTTTCCTCTCCGT TATGGTATGCGTATTTTACTTGTATGGAGGTGGTTTTGATGAACCTCATT TCTATTGATTTTTTAATCCACGTGGGGCAGGATGTTGAGAAGGGTGGGAT GTGGACTGCAGCGCTTGAGAAGATCTGCATGGATGAGGGGGTGACAAATG CATGGAAAGCTCGCATGCAGAAGATATTAGCATACCGTGTAGACGTACCT GCAGATGCGGTTGAAGGATGGTGCCGGCTCCATCCTTGCATCTCTCCTCC TGCGTCTCGGAAATTCGATCCGCCCCGGCCTCCGCACTATCGGCAAGATA GCGAAAGAGCGTGCGGAGAAGGAGAAGAGGGCGAGTCGAATGTCCATCTC GAGGTTTTTACCCGTAGAGGGCACGGCCGTCGAGTACGCATGTTTACTCA CGAGTCACTATGCCACCTTGGTGGCAAATATTCTCACGATGGATCTGGCA AATGTGCGTGGAGTAGCATCTGAATTAGGTTTGCATTTAGCCACAGGTAC GATACATGAGGGATGGCGGGAAAGGCGTCCCGAAGATAAAACCACCTTGG AGGATTTGATAGACCTTGAGAGCACCGTGCCGTGTGCGCCACTTCTCAAG GGGGGCCTAAAGCCGTCCTTTCAAATTAAAAATTTAGGGGATTTTGATGG AAAGATTGGAGGGAGGGTGCGAGTGTATCTTCGACGGGGCCGGATCACTT GATCCCATCAGTTGCAAACGCTGGATTGTTGCCTTCCAGAGACGGCTTCA GAAAACAAGGGGTGCGAGCAGTTAGCTCGAAATCAATGCAGAGGATACCG CATTGCATGGTAGTTGTAGTCGAAATATTGAGTGGGAACCTTTTGGGGTG GGCATGCGCCAAACGGAATTCGACAGCTGCGCCAAAGAGGGGGGGCGAAT GGAATGCGGGTGCAATGGCGCGGGACGGAAATGGAACTGCTTATCGCCAT GCCGTACAAAAGACAAGCGGTCGCGCCTGTGCTTGCTACTGGACACGACT CCTGAACTTTCAGCTGTATACTCGTCATACGTTGAACCACAGCTGAAGTG CGTGTATTTAATTTTGAACGATGAGGGTAAAACGCTGACGTTGGTCCGCT TCCAGCGGAGTAGTATCGAGGATGTCGCCTTCTCACACGCATGTCTGTGG GGACTGTTATGGAGTGAAGGTCCATTCCACGGCGGATTCGGGCTCTCAAT GCGGCTCTCGTGGGCAGTGTCGTCGAGAAAACCGTGGACGCACACGAGGA ACTGGAGGCCGTGGAAGCTGAGGAAGCAAGATGCCGCTCCCTCCACCTAT GTCGAGGTTATCATTGGTCGACTGGCCTTTTAGTAATTACAAGCTTCGAG ATATCTACTGCGATGCCCGTTTAGACTGTCGGAGTCGTCAAACGCTTGCT GTAGACTTTGTCAAGAAGATGACAGGATTGTCGCCAAAAACGGCATCATA CATGATGATGAGCCTTGCGTGCGCTCGACCGCTGCCTCTTATGCCTCGGT TGTTGGGGGTCTGCAGGTGGTGCGAGATTTTGCGGAATCTGATCTCGACA AGACTTCATTTGGGCAAATACACGTGGCCGGCTATGCGTATGCACATGGG CACAAAATGATTCGATAAATGGAAAAGGAGAAGGCGCAGTATCTGCAATG CAGAAAATTTTGGATGATAAGCATTTAAGATTGTATGCTAATTCGAAGGA ATTTGCTGGCCTTAAAAATGGCCAGTTACATGGAGAAATGGCGAGATGAT CTGTTGAAAATAGATGACGTGACGAAAACCAATTTGAGCGAGCATTTCTT CACTAGTAAGGCGTGCGAGGACTTCGTCATGGGTATGCGGGGAATGGTGG GGTTTGTGCGAATGTGTTGTACGGAAAAGGGTTATGTACTACCGCACATG CTTTCTTAGGACCATATAGAAGATCTGTTTGGTATTATGAAAGGGCTTCC GCGGAAAGGAACGCTGACGGCCGAGAAAAGGGAAGAGGTGTCTCGGACTA CTTTTATCTAAAAAAGTTTGACGATGTTCAAATCATCGGCCGGTTTTAAC GTGGCCGGACGGCCCCTGATGGACACACACACCGGATACACATGACGAAG TCCTCGTACGCCTTACTAGTAAAGAAATGCTCGCTCAAATTGGTTTTCGT CACGTCATCTATTTTCAACAGATCATCTCGCCATTTCTCCATGTAACTGG CCATTTTTAAGGCCAGCAAATTCCTTCGAATTAGCATACAATCTTAAATG CTTATTATCCAAAATTTTGCGCACCTTCTTTTCTCCGAACGTGTGATATG CCGACACATCTCAGAAGAGGGTTAGATCAATCTGATTCTTCGAATTCACC CCAAGAGATCTCACACACCGCTGACTCTTATCCGAGGAAGAATGGCCAAC AGCCTATCCGGAAAGCAAACCGTTCTCAA back to topprotein sequence of NO11G01640.1 >NO11G01640.1-protein ID=NO11G01640.1-protein|Name=NO11G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=166bp MRLKDGAGSILASLLLRLGNSIRPGLRTIGKIAKERAEKEKRASRMSISR FLPVEGTAVEYACLLTSHYATLVANILTMDLANVRGVASELGLHLATGTI HEGWRERRPEDKTTLEDLIDLESTVPCAPLLKGGLKPSFQIKNLGDFDGK IGGRVRVYLRRGRIT* back to topmRNA from alignment at chr11:542086..546136- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO11G01640.1 ID=NO11G01640.1|Name=NO11G01640.1|organism=Nannochloropsis oceanica|type=mRNA|length=4051bp|location=Sequence derived from alignment at chr11:542086..546136- (Nannochloropsis oceanica) TTCCATCAGCAGCAGCACCACCGCTCTTTGTGCCCCTAAGGGAGGCTTGA
CCTTTTTCACAGCCCACAGTGCGCTTGGGGACCAAAGCTTGATGGAGGGC
CTTCAGGCGCTCCTTGGCGGAGCTTTAAGTGTGGGGCTTCCTTTTGGAGG
GTTCGCTACGCGAGGTGCCAATGTGCCCCTTCCACTAGCAACTGCCTCCA
CAGAGGGTGTTCCCAGAGGGCAGCACCTACACTCATATAGAAGTATCGCA
TGCAACCTGACGTCCTCTAGGACTTACAAGGGGGGAGTCCCTCAACAATA
AAATGTTGCCTATTCACCCCTTATTCTTGTCCGAGTTTTCCAGCGACTTT
GACAGGTTTTTATCAGGCAAAGTTCCCGGACGTCCGCCAGTCAAAGTCGC
TAGTAAAACTCGGACAAGGAATAAGGGGTGAATATGCAACAATTTCTTTT
TGGAAGGCTCCTCCTCGTATGCAAGTCCTAGAGGACACAGGTTGCATGCG
ATAGTTCTAGAGGGATGTAGGAAGGAAGGAACTATATACTATACTACGGT
ACTCGGATAGATAGTAGTATAGGACACTGTCACTGGCATCACCGCTTTGT
TCCCCCCCTGGAGGACGTGATGCTCTTTGCTGTTGGTTACAAAGCAAACC
TGGGGTATGACAGGGGTTGAGACTTTCTCTCGAGTGTCTTTTAGAAAGGA
GACCCACACTAAAGAGTAGAGGGGGTCTATCCACCGCGAAAACCTTGACG
GTAAAATTCACGCCCACTTCCCACAATTTGTTCTTTTCTCGCACTTTGAG
GCTCGTTATTTGGTGTGTGTACAACCACGACAGACAATCAACCTCTAAAT
CTGTCTTTCCACCTATAAATGTACAGGTTTTCAAGGGTGGATGCTCCACA
TGCTCGCAAGGGGGGAGATTTGACGGGCCAACAGTCTGATCCCCCCATCA
TCAACCAACGAGTAATGGGTGATGGGCTACCCTCCCGCAAGCGCCTTGCG
GCCACTTTTACAGCGGACGTCTTGTCCCTCTCGGAAAGGGTAGTTAAAAT
AAAAAGCCAAGAGCTTCCATCGTGACACCACCGACATAATAAAAAAAACT
TCATACGCACATGGAGTATATACATATATAGGCGATATATTTAGGCGAGT
GGGGGAGCTCGATGCAGATCACATGACTCAGCGACTGTCTTCTAGATGCT
TGCTGATTACATGTACGAGGAGTGGAGGAAGGCACGTGTTGGGGCCTTTT
ACCGCCCCTCTCCTCCCGCAAGGTGGAAGGAGATGCCAGCTCAGGTAAGT
TTTTTTTTATTCTTAATTTTTCCTTATTATTATTTTTAATGGTTATTCAT
TTGTTTGCCATTTAATTTTTACGGCCGCCCACTCCTTACTCATGCCCTCC
CCTGGTTTTTACATAGACAGCTCAGTGAAACGCTTTATGTGGCTGGTGGG
CTCCTTGACAAGATCTGGAAGGCGGCACGCCGAAAGGAAGGGGAGGAAGG
GGATTGCGCGAGGCGGCGTCATCGCAAGCATTAGATTGGGGAGAATCACT
CCCGGAGGCTTGGCCCTTTCTTCGAGAGGGTGGCTGCTACAAGCCAGAAA
GGAGTCATGTTTTCCTCTCCGTTATGGTATGCGTATTTTACTTGTATGGA
GGTGGTTTTGATGAACCTCATTTCTATTGATTTTTTAATCCACGTGGGGC
AGGATGTTGAGAAGGGTGGGATGTGGACTGCAGCGCTTGAGAAGATCTGC
ATGGATGAGGGGGTGACAAATGCATGGAAAGCTCGCATGCAGAAGATATT
AGCATACCGTGTAGACGTACCTGCAGATGCGGTTGAAGGATGGTGCCGGC
TCCATCCTTGCATCTCTCCTCCTGCGTCTCGGAAATTCGATCCGCCCCGG
CCTCCGCACTATCGGCAAGATAGCGAAAGAGCGTGCGGAGAAGGAGAAGA
GGGCGAGTCGAATGTCCATCTCGAGGTTTTTACCCGTAGAGGGCACGGCC
GTCGAGTACGCATGTTTACTCACGAGTCACTATGCCACCTTGGTGGCAAA
TATTCTCACGATGGATCTGGCAAATGTGCGTGGAGTAGCATCTGAATTAG
GTTTGCATTTAGCCACAGGTACGATACATGAGGGATGGCGGGAAAGGCGT
CCCGAAGATAAAACCACCTTGGAGGATTTGATAGACCTTGAGAGCACCGT
GCCGTGTGCGCCACTTCTCAAGGGGGGCCTAAAGCCGTCCTTTCAAATTA
AAAATTTAGGGGATTTTGATGGAAAGATTGGAGGGAGGGTGCGAGTGTAT
CTTCGACGGGGCCGGATCACTTGATCCCATCAGTTGCAAACGCTGGATTG
TTGCCTTCCAGAGACGGCTTCAGAAAACAAGGGGTGCGAGCAGTTAGCTC
GAAATCAATGCAGAGGATACCGCATTGCATGGTAGTTGTAGTCGAAATAT
TGAGTGGGAACCTTTTGGGGTGGGCATGCGCCAAACGGAATTCGACAGCT
GCGCCAAAGAGGGGGGGCGAATGGAATGCGGGTGCAATGGCGCGGGACGG
AAATGGAACTGCTTATCGCCATGCCGTACAAAAGACAAGCGGTCGCGCCT
GTGCTTGCTACTGGACACGACTCCTGAACTTTCAGCTGTATACTCGTCAT
ACGTTGAACCACAGCTGAAGTGCGTGTATTTAATTTTGAACGATGAGGGT
AAAACGCTGACGTTGGTCCGCTTCCAGCGGAGTAGTATCGAGGATGTCGC
CTTCTCACACGCATGTCTGTGGGGACTGTTATGGAGTGAAGGTCCATTCC
ACGGCGGATTCGGGCTCTCAATGCGGCTCTCGTGGGCAGTGTCGTCGAGA
AAACCGTGGACGCACACGAGGAACTGGAGGCCGTGGAAGCTGAGGAAGCA
AGATGCCGCTCCCTCCACCTATGTCGAGGTTATCATTGGTCGACTGGCCT
TTTAGTAATTACAAGCTTCGAGATATCTACTGCGATGCCCGTTTAGACTG
TCGGAGTCGTCAAACGCTTGCTGTAGACTTTGTCAAGAAGATGACAGGAT
TGTCGCCAAAAACGGCATCATACATGATGATGAGCCTTGCGTGCGCTCGA
CCGCTGCCTCTTATGCCTCGGTTGTTGGGGGTCTGCAGGTGGTGCGAGAT
TTTGCGGAATCTGATCTCGACAAGACTTCATTTGGGCAAATACACGTGGC
CGGCTATGCGTATGCACATGGGCACAAAATGATTCGATAAATGGAAAAGG
AGAAGGCGCAGTATCTGCAATGCAGAAAATTTTGGATGATAAGCATTTAA
GATTGTATGCTAATTCGAAGGAATTTGCTGGCCTTAAAAATGGCCAGTTA
CATGGAGAAATGGCGAGATGATCTGTTGAAAATAGATGACGTGACGAAAA
CCAATTTGAGCGAGCATTTCTTCACTAGTAAGGCGTGCGAGGACTTCGTC
ATGGGTATGCGGGGAATGGTGGGGTTTGTGCGAATGTGTTGTACGGAAAA
GGGTTATGTACTACCGCACATGCTTTCTTAGGACCATATAGAAGATCTGT
TTGGTATTATGAAAGGGCTTCCGCGGAAAGGAACGCTGACGGCCGAGAAA
AGGGAAGAGGTGTCTCGGACTACTTTTATCTAAAAAAGTTTGACGATGTT
CAAATCATCGGCCGGTTTTAACGTGGCCGGACGGCCCCTGATGGACACAC
ACACCGGATACACATGACGAAGTCCTCGTACGCCTTACTAGTAAAGAAAT
GCTCGCTCAAATTGGTTTTCGTCACGTCATCTATTTTCAACAGATCATCT
CGCCATTTCTCCATGTAACTGGCCATTTTTAAGGCCAGCAAATTCCTTCG
AATTAGCATACAATCTTAAATGCTTATTATCCAAAATTTTGCGCACCTTC
TTTTCTCCGAACGTGTGATATGCCGACACATCTCAGAAGAGGGTTAGATC
AATCTGATTCTTCGAATTCACCCCAAGAGATCTCACACACCGCTGACTCT
TATCCGAGGAAGAATGGCCAACAGCCTATCCGGAAAGCAAACCGTTCTCA
A back to topCoding sequence (CDS) from alignment at chr11:542086..546136- >NO11G01640.1 ID=NO11G01640.1|Name=NO11G01640.1|organism=Nannochloropsis oceanica|type=CDS|length=498bp|location=Sequence derived from alignment at chr11:542086..546136- (Nannochloropsis oceanica) ATGCGGTTGAAGGATGGTGCCGGCTCCATCCTTGCATCTCTCCTCCTGCG TCTCGGAAATTCGATCCGCCCCGGCCTCCGCACTATCGGCAAGATAGCGA AAGAGCGTGCGGAGAAGGAGAAGAGGGCGAGTCGAATGTCCATCTCGAGG TTTTTACCCGTAGAGGGCACGGCCGTCGAGTACGCATGTTTACTCACGAG TCACTATGCCACCTTGGTGGCAAATATTCTCACGATGGATCTGGCAAATG TGCGTGGAGTAGCATCTGAATTAGGTTTGCATTTAGCCACAGGTACGATA CATGAGGGATGGCGGGAAAGGCGTCCCGAAGATAAAACCACCTTGGAGGA TTTGATAGACCTTGAGAGCACCGTGCCGTGTGCGCCACTTCTCAAGGGGG GCCTAAAGCCGTCCTTTCAAATTAAAAATTTAGGGGATTTTGATGGAAAG ATTGGAGGGAGGGTGCGAGTGTATCTTCGACGGGGCCGGATCACTTGA back to top
|