NO11G01330, NO11G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01330 vs. NCBI_GenBank
Match: EWM25163.1 (hypothetical protein Naga_100016g2 [Nannochloropsis gaditana]) HSP 1 Score: 559.3 bits (1440), Expect = 1.500e-155 Identity = 407/840 (48.45%), Postives = 466/840 (55.48%), Query Frame = 0 Query: 1 MAGGDIEPPHSITKPTKVIDHDLHGHTGGGHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLMPEELNWKCRLFMTMEDPSFSLTARLVSAFINACLFLSIVAFSLGTMFEFKHFPYFCPSHMIVGFTCWDGFGMPTRVMPVNVYDRSTYEAGRQMYNEYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVAPAAYAEPSWMDEVAPVTENPGLYNLRGLVQSEEERVHRRLYPKKVRPIGVPYCEEICEYEPDKEIEIAEGFAMATFTVDYLTRLATAHAVPYRVIN------PSANLSYEPGGLFKTVRYFFTFIMLVDFFALFPYYLKTILERLERDLASSAMIRTLGLIRVTRVLPFYMHMVVSTKGVFSQGDSPHFMRLFEMGVLFRFLRLGDYAEGAPLFFSTLKASLPAIGLALIAMLCLAMMFGTAIFFAEHGTFRVTPEFPTGAFLT--RGRDGTLVEPAHANIFMSMWYVISDTTPMPTVIMLVPKTTAGEVLDVVMDYMSLIVLTLPIAIFARNFHEQYNKFFKNWEEERGDIDWSSDNXXXXXXXXXXXXGEQWTKGAEMDDFDKAIAKLEAAQQXXXXXXXXXXXXXXRKARQRFGFEEESKFGDFGV 637 MAGGD++ HSI KP+KV+D DLH G HG XXXXXXXXXXXXXXXXXXX L PEELNW+CRLF+T+E+P +SL ARL SAFINACLF+SI+AF +GTM EFKHFPY CP HMIVG+TCWDG+GMPT+VMPV+VY + +Y G++MY+EY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+ EPSWM EVAP T GL+NL GLVQ E E HRRL KK RPIG PYCEEICEYEPDKEIEIAEGFAMA FT+DYL RL TAHAVP+RV+N PSA YEP GLFKTV YFF+F+MLVD AL PYY KTIL+R+ D+ASS +R LG++RV R++PFYMHM+VSTKG+ Q +PH LF VLF FLRLG Y EGAPLFFSTLKA +PAI +A++AM+CLAM+F + IF E G FRVTPEFP GAFLT RD TLVEPAHAN FMSMWYVISDTT MPT+ ML P T GEV DV++DYMSL+VLTLPIAI AR F+EQY FFK+W E DI SS + E+DDFD A+AKL AAQ+ + RF F+EESK G+F V Sbjct: 9 MAGGDMDMSHSINKPSKVLDEDLH----GSHG------------HKAHDASXXXXXXXXXXXXXXXXXXXHDLTPEELNWRCRLFLTLEEPDYSLAARLFSAFINACLFMSIIAFMMGTMPEFKHFPYVCPPHMIVGYTCWDGYGMPTKVMPVDVYHKGSYLEGKKMYDEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALSDLLGDTEEEPSWMSEVAPTTPGVGLFNLNGLVQPEVEVGHRRLAYKKKRPIGEPYCEEICEYEPDKEIEIAEGFAMAAFTIDYLGRLFTAHAVPWRVLNHGAAHDPSAK-HYEPNGLFKTVAYFFSFMMLVDLLALGPYYAKTILDRIATDVASSQTMRALGIVRVLRIIPFYMHMIVSTKGLLLQDKAPHIFHLFNFSVLFNFLRLGSYTEGAPLFFSTLKACIPAISVAVVAMVCLAMVFASLIFVVERGRFRVTPEFPDGAFLTARSQRDPTLVEPAHANSFMSMWYVISDTTTMPTIAMLTPVTILGEVFDVMLDYMSLLVLTLPIAIVAREFNEQYTSFFKDWNRE--DIVMSSSSEDEGHSGG--------LDDGEVDDFDAAVAKLAAAQE-----------KGAKHRSTRFSFDEESKIGEFRV 810
BLAST of NO11G01330 vs. NCBI_GenBank
Match: EWM27103.1 (Ion transport [Nannochloropsis gaditana]) HSP 1 Score: 95.1 bits (235), Expect = 8.200e-16 Identity = 79/282 (28.01%), Postives = 132/282 (46.81%), Query Frame = 0 Query: 267 YCEE-ICEYEPDKEIEIAEGFAMATFTVDYLTRLATAHAVPYRVINPSANLSYEPGGLFKTVRYFFTFIMLVDFFALFPYYLKTILERLERDLASSAMIRTLGLIRVTRVLPFYMHMVVSTKGVFSQGDSPHFMRLFEMGVLFRFLRLGDYAEGAPLFFSTLKASLPAIGLALIAMLCLAMMFGTAIFFAEHGTFRVTPEFPTGAFL-TRGRDGTLVEPAHANIFMSMWYVISDTTPMPTVIMLVPKTTAGEVLDVVMDYMSLIVLTLPIAIFARNFHEQYN 547 +C E +C ++ I E + + FT+DYL R+ AVP ++ P +L Y G K +++ + P T M+ L +I V ++PFY++++ + F+ +F++G FR E + TL+ASLPA+ + + LA++FG+ +F+ E G + VT EFP G FL R+ L + +IF +++ + +TT + L P TT G + + Y L+ L LPI I +NF +QYN Sbjct: 118 FCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFP-RSLEYTIDGRLKD---------RSNYYRMDPCKKTT-----------KYMLSGLNIIDVISIVPFYVYLLAPYPAI-RVFRFLRFLLIFKLGRRFR--------EAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNA-NLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYN 368
BLAST of NO11G01330 vs. NCBI_GenBank
Match: EWM28383.1 (expulsion defective family member (exp-2) [Nannochloropsis gaditana] >EWM28385.1 expulsion defective family member (exp-2) [Nannochloropsis gaditana]) HSP 1 Score: 78.2 bits (191), Expect = 1.000e-10 Identity = 78/286 (27.27%), Postives = 115/286 (40.21%), Query Frame = 0 Query: 271 ICEYEPDKEIEIAEGFAMATFTVDYLTRLATAHAVPYRVI--------NPSANLSYEPGGLFKTVRYFFTFIMLVDFFALFPYYLKTILERLERDLASSAMIRTLGLIRVTRVLPFYMHMVVSTKGVFSQGDSPHFMRLFEMGVLFRFLRLGDYAEGAPLFFSTLKASLPAIGLALIAMLCLAMMFGTAIFFAEHGTFRVTPEFPTGAFLTRGRD-GTLVEPAHANIFMSMWYVISDTTPMPTVIMLVPKTTAGEVLDVVMDYMSLIVLTLPIAIFARNFHEQYNK 548 IC P + E + F DYL RL T HAVP R+I + +P L KT RY ++D + PY L ++ S+ I L+R+TRV L+L Y +G L ++TLK S P++ L + + L + G F+ E G F+VT P GAF R + G V P + + W +I+ TT L P + G + Y ++ L+LPIAI + F+ Y+K Sbjct: 97 ICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVI--------STMNIMHWRLLRITRV--------------------------------XXXLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATT--VGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDK 340
BLAST of NO11G01330 vs. NCBI_GenBank
Match: EWM28384.1 (expulsion defective family member (exp-2) [Nannochloropsis gaditana]) HSP 1 Score: 78.2 bits (191), Expect = 1.000e-10 Identity = 78/286 (27.27%), Postives = 115/286 (40.21%), Query Frame = 0 Query: 271 ICEYEPDKEIEIAEGFAMATFTVDYLTRLATAHAVPYRVI--------NPSANLSYEPGGLFKTVRYFFTFIMLVDFFALFPYYLKTILERLERDLASSAMIRTLGLIRVTRVLPFYMHMVVSTKGVFSQGDSPHFMRLFEMGVLFRFLRLGDYAEGAPLFFSTLKASLPAIGLALIAMLCLAMMFGTAIFFAEHGTFRVTPEFPTGAFLTRGRD-GTLVEPAHANIFMSMWYVISDTTPMPTVIMLVPKTTAGEVLDVVMDYMSLIVLTLPIAIFARNFHEQYNK 548 IC P + E + F DYL RL T HAVP R+I + +P L KT RY ++D + PY L ++ S+ I L+R+TRV L+L Y +G L ++TLK S P++ L + + L + G F+ E G F+VT P GAF R + G V P + + W +I+ TT L P + G + Y ++ L+LPIAI + F+ Y+K Sbjct: 97 ICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIYWDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVI--------STMNIMHWRLLRITRV--------------------------------XXXLKLSRYFDGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFRRALEGGEEVSPFTSVPVSAYWVIITATT--VGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYDK 340 The following BLAST results are available for this feature:
BLAST of NO11G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01330 ID=NO11G01330|Name=NO11G01330|organism=Nannochloropsis oceanica|type=gene|length=3670bpback to top protein sequence of NO11G01330.1 >NO11G01330.1-protein ID=NO11G01330.1-protein|Name=NO11G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=637bpback to top Synonyms
Publications
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