Naga_100016g2, gene5414 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g2
Unique Namegene5414
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:382782..385906 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:382782..385906 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL019ngnoL019Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01330NO11G01330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5602rna5602-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5602rna5602Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5602

>rna5602-protein ID=rna5602-protein|Name=rna5602|organism=Nannochloropsis gaditana|type=polypeptide|length=810bp
MLALGGQAMAGGDMDMSHSINKPSKVLDEDLHGSHGHKAHDASHGHHGGK
DHGHGGDHGHGHHDLTPEELNWRCRLFLTLEEPDYSLAARLFSAFINACL
FMSIIAFMMGTMPEFKHFPYVCPPHMIVGYTCWDGYGMPTKVMPVDVYHK
GSYLEGKKMYDEYLEKKKEKEAAAGGTKGGYGGAGGGGGGYAPAGAGAAG
GAGDYAGAGGGPAAVGGYAPGAGGGAGYPPAGGTPGGAGGAGAGYTSGTG
GAARGGYPPAGGAAGAGGPAAGGAGYAGGYPTSGAGGGATTGGYAGAGSP
GGGGAGGYAPAGGAGAAGGGGYAGAPTGGAGGGGGYPSAGTGAGYPSAGG
AGGYPPSGGGYSPAGGYRPAAGGYPPATGGYAPMGYGGASTGSYPPRALS
DLLGDTEEEPSWMSEVAPTTPGVGLFNLNGLVQPEVEVGHRRLAYKKKRP
IGEPYCEEICEYEPDKEIEIAEGFAMAAFTIDYLGRLFTAHAVPWRVLNH
GAAHDPSAKHYEPNGLFKTVAYFFSFMMLVDLLALGPYYAKTILDRIATD
VASSQTMRALGIVRVLRIIPFYMHMIVSTKGLLLQDKAPHIFHLFNFSVL
FNFLRLGSYTEGAPLFFSTLKACIPAISVAVVAMVCLAMVFASLIFVVER
GRFRVTPEFPDGAFLTARSQRDPTLVEPAHANSFMSMWYVISDTTTMPTI
AMLTPVTILGEVFDVMLDYMSLLVLTLPIAIVAREFNEQYTSFFKDWNRE
DIVMSSSSEDEGHSGGLDDGEVDDFDAAVAKLAAAQEKGAKHRSTRFSFD
EESKIGEFRV
back to top
Synonyms
Publications