NO01G05460, NO01G05460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05460 vs. NCBI_GenBank
Match: EWM22764.1 (chromatin associated protein kti12 [Nannochloropsis gaditana]) HSP 1 Score: 190.7 bits (483), Expect = 7.600e-45 Identity = 102/170 (60.00%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 109 MARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVL--AYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLAR 277 MARAETTQHCVVW+ + VA+AWNE RED YPPELF+DL RFEAP E NRWDRPLI + P EG E+KEG R Y+QVL A+TEGKAPAAGLSTA APRN+ADAL+LLDQ TQRLL+++L+RQKTS+PGD +T+P+A PV R Sbjct: 1 MARAETTQHCVVWVALEHQHVARAWNESREDRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPP--------------SEGA--EEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_013385017.1 (protein KTI12 homolog isoform X1 [Lingula anatina]) HSP 1 Score: 181.4 bits (459), Expect = 4.600e-42 Identity = 108/293 (36.86%), Postives = 148/293 (50.51%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGR--EDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292 MPLV +CGLP +GKTT L +LE EL A+ I K E Y ++ SEK R LKS V L+RE V++LDS+NYIKG+RY+L+C+ +A T H V+ E D A WN+ R ED Y E+ + L RFE P+ +RWD PL P L Y+++ +L + K P L+T P + + LY LD+ TQ ++ +LD QKTS+PGD + +P A V L +HV+L EL+R RRQF+ Sbjct: 1 MPLVVMCGLPCSGKTTRTNQLKHYLESEL---------------SKAVHIIDDHAIGIDKNEIYAESKSEKDARSALKSAVQRKLSREDVLILDSLNYIKGYRYELFCLTKASQTPHAVIHCEI-DPHQAAEWNKNRSEEDSYSQEILDALVMRFETPDSRSRWDSPLFTIHPTDE-----------------------------LPYKEISDSLFQRKPPPPNLATVAQPLSSTNFLYELDRITQDVINVILDAQKTSVPGDKVAIPNAQEKVELFKHVTLAELQRTRRQFI 248
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_013385019.1 (protein KTI12 homolog isoform X1 [Lingula anatina]) HSP 1 Score: 181.0 bits (458), Expect = 6.100e-42 Identity = 108/293 (36.86%), Postives = 148/293 (50.51%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGR--EDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292 MPLV +CGLP +GKTT L +LE EL A+ I K E Y ++ SEK R LKS V L+RE V++LDS+NYIKG+RY+L+C+ +A T H V+ E D A WN+ R ED Y E+ + L RFE P+ +RWD PL P L Y+++ +L + K P L+T P + + LY LD+ TQ ++ +LD QKTS+PGD + +P A V L +HV+L EL+R RRQF+ Sbjct: 1 MPLVVMCGLPCSGKTTRTNQLKHYLESEL---------------SKAVHIIDDHAIGIYKNEIYAESKSEKDARSALKSAVQRKLSREDVLILDSLNYIKGYRYELFCLTKASQTPHAVIHCEI-DPHQAAEWNKNRSEEDSYSQEILDALVMRFETPDSRSRWDSPLFTIHPTDE-----------------------------LPYKEISDSLFQRKPPPPNLATVAQPLSSTNFLYELDRITQDVINVILDAQKTSVPGDKVAIPNAQEKVELFKHVTLAELQRTRRQFI 248
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_019127828.1 (PREDICTED: protein KTI12 homolog [Larimichthys crocea]) HSP 1 Score: 173.7 bits (439), Expect = 9.700e-40 Identity = 100/293 (34.13%), Postives = 152/293 (51.88%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGRE--DGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292 MPL+ +CG P +GKT AE L + E+ + L + + Y D+ EK R LK+ V+ +N++ VV+LDS+NYIKG+RY+L+C+ + T HC+V+ SD + WN R+ + Y ++F+ L RFEAP+ NRWD PL + K+D L Y + AL + KAP A ST P + A+ LY LD+ TQ +L + + QKTS+PGD +++P A ++L R+V++ EL++LRRQF+ Sbjct: 1 MPLIVMCGYPCSGKTRRAEELKEYFEQNTDRK---------------VHIVGDGGLDVDRNTVYADSQKEKNVRSSLKAEVERKVNKDHVVILDSLNYIKGYRYELFCLIKHAQTPHCLVYCLTSDDE-SSTWNTNRDAAEQYTKDIFDALVLRFEAPDSRNRWDNPLFTIL-----------------------KDD------TLPYEAISDALFKRKAPPANQSTQSQPLSSANFLYELDKITQEVLMAVFNAQKTSVPGDLISVPGATEKIKLTRNVNMAELRKLRRQFI 248
BLAST of NO01G05460 vs. NCBI_GenBank
Match: OWZ23919.1 (hypothetical protein PHMEG_0001144 [Phytophthora megakarya]) HSP 1 Score: 172.9 bits (437), Expect = 1.600e-39 Identity = 109/336 (32.44%), Postives = 163/336 (48.51%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLP--QANLPVRLARHVSLPELKRLRRQFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRVGDAFVEYIN 335 MPLV +CG+PA+GKTT A LV L+++LP ++ ++++ K +GY D+ +EK TR LK+ V+ ++ +T+VVLD++NY KG RY+L+C A+AE+T HCVV+++ S + +A NE +E + +L +L RFE P E NRWD PL R P ED + + A+ GK AGL+T AP E+ L LD T ++ LL Q+ + D L +P N ++L R +S E +R RRQ++K +GD FVEY+N Sbjct: 1 MPLVVVCGIPASGKTTVATALVDHLQRQLPDEE--------------VVCISTDSVNVDKTQGYGDSKTEKNTRSALKAAVEKVVSTKTIVVLDALNYTKGERYELFCKAKAESTTHCVVYVDTSVE-IATKRNEAQEQQFDSKLLEELAARFEVPVEKNRWDSPLFRLTP-----------------------EDFAANGIGVPLDAITDAVRFGKTVKAGLATKAAPAAESSFLQALDDVTSAIVDALLAHQRDAGVADGLRVPPHAVNAELKLTRPLSTAEARRHRRQYIKITRLRPCPV---------------------ATIGDLFVEYLN 277
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_001180236.2 (PREDICTED: protein KTI12 homolog [Strongylocentrotus purpuratus]) HSP 1 Score: 171.8 bits (434), Expect = 3.700e-39 Identity = 105/293 (35.84%), Postives = 148/293 (50.51%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGRED--GYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292 MPLV +CG P++GK+ + L +F+E + + K + Y D+ EK RG LKS L+++ +V+LDS+NYIKGFRY+LYC ++ T HCV++ + + VA WN RED Y E+F+ L RFEAP NRWD PL P S E L +++ AL KAP LST P + + LY LD+ TQ + TL+ QKTS+PGD +++P A V LAR ++ EL+R+RRQF+ Sbjct: 1 MPLVIMCGYPSSGKSKRSNQLQSFIESSTDKK---------------CLVINDDSFGTYKNDVYADSKKEKDARGKLKSSTQRLLSKDDLVILDSLNYIKGFRYELYCAVKSSQTPHCVIFCD-TPVEVATTWNSEREDQEKYTKEIFDGLVMRFEAPVSKNRWDSPLFSIAP---------------------SDE--------LPCQEIYDALFLRKAPPRNLSTVSQPLSATNFLYELDKRTQEAVTTLMSAQKTSIPGDDISIPGAKDKVHLARSINNAELQRIRRQFI 248
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_020469006.1 (protein KTI12 homolog [Monopterus albus]) HSP 1 Score: 171.4 bits (433), Expect = 4.800e-39 Identity = 98/293 (33.45%), Postives = 151/293 (51.54%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGRE--DGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292 MPL+ +CG P +GKT AE L + E+ + AL + K + Y D+ EK R LK+ V+ +N++ +V+ DS+NYIKG+RY+L+C+ + T HC+V+ SD+ + +WN R+ + Y +LF+ L RFEAP+ NRWD PL + K+D L Y + AL + KAP ST P + + LY LD+ TQ +L + + QKTS+PGD +++P A + L R +++ EL++LRRQF+ Sbjct: 1 MPLIVMCGYPCSGKTRRAEELKVYFEQNTERK---------------VHIVGDRALGVDKSDVYADSQKEKNVRAALKAEVERKVNKDDIVIFDSLNYIKGYRYELFCLIKHAQTPHCLVYCLTSDEQ-SSSWNTNRDAAEQYTQDLFDALVLRFEAPDSRNRWDSPLFTIL-----------------------KDD------TLPYEAISDALFKRKAPPPNQSTQSQPLSSSSFLYELDKITQDVLTAIFNAQKTSVPGDLISVPGATEKMELTRSINMAELRKLRRQFI 248
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_019751117.1 (PREDICTED: protein KTI12 homolog [Hippocampus comes]) HSP 1 Score: 170.6 bits (431), Expect = 8.200e-39 Identity = 99/293 (33.79%), Postives = 151/293 (51.54%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGR--EDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292 MPL+ +CG P +GKT AE L + E+ + L +K Y D+ EK R LK+ V+ +N++ +V+LDS+NYIKG+RY+L+C+ + T HC+V+ SD+ V+ AWN R E+ Y ++ + L RFEAP+ NRWD PL + ++D L + + AL + KAP ST P + A+ LY LD+ TQ +L + + QKTS+PGDS+++P A + L R V++ EL++ RRQF+ Sbjct: 1 MPLIVMCGYPCSGKTRRAEELKGYFEQNTDRK---------------VHIVGDSPLAAEKNAVYADSQKEKQVRAALKADVERKVNKDDIVILDSLNYIKGYRYELFCLIKHAQTPHCLVYCLTSDE-VSSAWNTSRDAEEQYTQDILDALILRFEAPDSRNRWDSPLFNIL-----------------------QDD------ALPFEAITDALFKRKAPPPNQSTQSQPLSSANFLYELDKTTQDVLMAIFNAQKTSVPGDSISVPGATEKIELTRTVNMAELRKFRRQFI 248
BLAST of NO01G05460 vs. NCBI_GenBank
Match: ETK85768.1 (hypothetical protein L915_09516 [Phytophthora parasitica] >ETL39197.1 hypothetical protein L916_09419 [Phytophthora parasitica] >ETL92304.1 hypothetical protein L917_09356 [Phytophthora parasitica] >ETO74442.1 hypothetical protein F444_09789 [Phytophthora parasitica P1976] >ETP15624.1 hypothetical protein F441_09658 [Phytophthora parasitica CJ01A1] >KUF87462.1 KTI12 protein [Phytophthora nicotianae]) HSP 1 Score: 170.2 bits (430), Expect = 1.100e-38 Identity = 108/336 (32.14%), Postives = 160/336 (47.62%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANL--PVRLARHVSLPELKRLRRQFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRVGDAFVEYIN 335 MPLV +CG+PAAGKTT A LV L+++LP Q +++ K +GY D+ +EK TR LK+ V+ +N +T+VVLD++NY KG RY+L+C A+AE+T +CVV+++ + +A N E+ P+L +L RFE P + NRWD PL R P +D + + + A+ GK AGL+T AP E L LD+ T ++ LL Q+ + D L +P + +RL R +S E +R RRQ++K +GD FVEY+N Sbjct: 1 MPLVVVCGIPAAGKTTVATALVGHLKRQLPDQD--------------VLCISPATVNVDKTKGYADSRAEKNTRSALKAAVEKVVNTKTIVVLDALNYTKGERYELFCKAKAESTTYCVVYVD-TPMEIALQRNAASEENLDPKLLQELAARFEVPMDKNRWDSPLFRLTP-----------------------DDFAVDGAGIPLDAITDAIRFGKTVKAGLATKAAPAAETSFLQALDEVTNAVVEALLTHQRDAGVADGLRVPPHTVKNELRLTRPLSTAEARRHRRQYIKITRLRPCAVAD---------------------IGDLFVEYLN 277
BLAST of NO01G05460 vs. NCBI_GenBank
Match: ETM45616.1 (hypothetical protein L914_09384 [Phytophthora parasitica]) HSP 1 Score: 170.2 bits (430), Expect = 1.100e-38 Identity = 108/336 (32.14%), Postives = 160/336 (47.62%), Query Frame = 0 Query: 1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANL--PVRLARHVSLPELKRLRRQFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRVGDAFVEYIN 335 MPLV +CG+PAAGKTT A LV L+++LP Q +++ K +GY D+ +EK TR LK+ V+ +N +T+VVLD++NY KG RY+L+C A+AE+T +CVV+++ + +A N E+ P+L +L RFE P + NRWD PL R P +D + + + A+ GK AGL+T AP E L LD+ T ++ LL Q+ + D L +P + +RL R +S E +R RRQ++K +GD FVEY+N Sbjct: 1 MPLVVVCGIPAAGKTTVATALVGHLKRQLPDQD--------------VLCISPATVNVDKTKGYADSRAEKNTRSALKAAVEKVVNTKTIVVLDALNYTKGERYELFCKAKAESTTYCVVYVD-TPMEIALQRNAASEENLDPKLLQELAARFEVPMDKNRWDSPLFRLTP-----------------------DDFAVDGAGIPLDAITDAIRFGKTVKAGLATKAAPAAETSFLQALDEVTNAVVEALLTNQRDAGVADGLRVPPHTVKNELRLTRPLSTAEARRHRRQYIKITRLRPCAVAD---------------------IGDLFVEYLN 277 The following BLAST results are available for this feature:
BLAST of NO01G05460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05460 ID=NO01G05460|Name=NO01G05460|organism=Nannochloropsis oceanica|type=gene|length=3023bpback to top protein sequence of NO01G05460.1 >NO01G05460.1-protein ID=NO01G05460.1-protein|Name=NO01G05460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=339bpback to top Synonyms
Publications
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