NO01G02770, NO01G02770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02770 vs. NCBI_GenBank
Match: EWM29171.1 (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 410.2 bits (1053), Expect = 5.900e-111 Identity = 190/288 (65.97%), Postives = 231/288 (80.21%), Query Frame = 0 Query: 22 REKKQQLDQVQPATTQTHETPDPTLAIGNSPRFLGDRQPLPDELQLLEDFQLLLDEGQVALPRSFWEANYNESRCSLFWRFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVDDAFFLEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITILHTFEGHLWLEAWMAKLPA 310 RE+ QQ DQ Q A D T +I P ++G RQPLP+ELQL+ +FQ +LD V LPR+FWEANY+ESRCSLFWRFLVAN+GH+ AK QL +D+AWR++I+L +LQ R+++VG++DAFF+ YPC+ LG+ED + NY+PVVYR LTHL TK LA KGVTVEKM+KHELWQYE DC+LLF HPESFP RQLKVIIDI+GMTW QCTKDL+SILSGFSSFSK+HHPERLQKL+IIGAPKPF F+WNTI+S IIP T+NKI ILH+ +G+ WLE WM P+ Sbjct: 18 RERGQQADQ-QSALV------DATQSIDVVPSYVGGRQPLPEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPS 298
BLAST of NO01G02770 vs. NCBI_GenBank
Match: EWM29173.1 (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 368.2 bits (944), Expect = 2.600e-98 Identity = 161/225 (71.56%), Postives = 193/225 (85.78%), Query Frame = 0 Query: 85 SFWEANYNESRCSLFWRFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVDDAFFLEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITILHTFEGHLWLEAWMAKLPA 310 SFWEANY+ESRCSLFWRFLVAN+GH+ AK QL +D+AWR++I+L +LQ R+++VG++DAFF+ YPC+ LG+ED + NY+PVVYR LTHL TK LA KGVTVEKM+KHELWQYE DC+LLF HPESFP RQLKVIIDI+GMTW QCTKDL+SILSGFSSFSK+HHPERLQKL+IIGAPKPF F+WNTI+S IIP T+NKI ILH+ +G+ WLE WM P+ Sbjct: 29 SFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPS 253
BLAST of NO01G02770 vs. NCBI_GenBank
Match: EWM29172.1 (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 266.9 bits (681), Expect = 8.100e-68 Identity = 126/202 (62.38%), Postives = 156/202 (77.23%), Query Frame = 0 Query: 22 REKKQQLDQVQPATTQTHETPDPTLAIGNSPRFLGDRQPLPDELQLLEDFQLLLDEGQVALPRSFWEANYNESRCSLFWRFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVDDAFFLEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVII 224 RE+ QQ DQ Q A D T +I P ++G RQPLP+ELQL+ +FQ +LD V LPR+FWEANY+ESRCSLFWRFLVAN+GH+ AK QL +D+AWR++I+L +LQ R+++VG++DAFF+ YPC+ LG+ED + NY+PVVYR LTHL TK LA KGVTVEKM+KHELWQYE DC+LLF HPESFP RQLKV I Sbjct: 18 RERGQQADQ-QSALV------DATQSIDVVPSYVGGRQPLPEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVRI 212
BLAST of NO01G02770 vs. NCBI_GenBank
Match: GBG33987.1 (Phosphatidylinositol/phosphatidylcholine transfer protein SFH1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 79.0 bits (193), Expect = 3.100e-11 Identity = 51/199 (25.63%), Postives = 92/199 (46.23%), Query Frame = 0 Query: 93 ESRCSLFWRFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVDDAFFLEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITIL 292 E R L RFL A +G ++ A E L D+ WRE + + L + EI+G D A L+++PC G + PV+Y + + A+ + + + + +++W E+ + S +S A ++D+ G Q + ++ + + H P ++ II AP F +W + + P T+ KITI+ Sbjct: 40 EPREKLLGRFLYACDGDVSEAAEVLVHDLRWREQVHMDNLMTLSPGEILGCDPALVLKRFPCKEFGTDRTGR---PVLYYNARGMNADAV-LEATSSKAFILYQVWLRESAVRRA-SVAQSGGAPYYTAVMDLGGSRLAQANGNFYGLIRLLAEVDQKHFPGLFGQMIIINAPIFFTVVWKVVRKFLSP-QTERKITIV 232
BLAST of NO01G02770 vs. NCBI_GenBank
Match: CCI10131.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 77.0 bits (188), Expect = 1.200e-10 Identity = 52/200 (26.00%), Postives = 94/200 (47.00%), Query Frame = 0 Query: 92 NESRCSLFWRFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVDDAFFLEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITIL 292 N++ S RF+ A +G+ KE+ + +AWR++ +L ++ + + YP F G N PV Y + AL G+++E ++ H + Y T+ + PE A + ++D++G+ +++ + SSF+ H+PER +FII P F IW + I PV T++K+ +L Sbjct: 446 NDNPISFSPRFIAAEKGNEEKGKERYLQTVAWRKEHELDQILRKPHHNFDKIKKC-----YPQYFHGRSKAGN---PVYYEKPGKIDLVALKQLGLSIEDLIYH--YMYITEFLWTYIEPED--AARSITVLDVSGIGMSSLGGEVLDFIKRASSFTAAHYPERSAHIFIINIPGWFNMIWRIVKPLIDPV-TRDKVHML 632
BLAST of NO01G02770 vs. NCBI_GenBank
Match: XP_002293196.1 (phosphatidylinositol/phosphatidylcholine transfer protein [Thalassiosira pseudonana CCMP1335] >EED89657.1 phosphatidylinositol/phosphatidylcholine transfer protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 74.7 bits (182), Expect = 5.900e-10 Identity = 53/211 (25.12%), Postives = 99/211 (46.92%), Query Frame = 0 Query: 101 RFLVANEGHLAHAKEQLTKDIAWREDIKLYELQG--RTREEIVGVDDAFFLEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITILHTFEGHLWL-EAWMAKLP 309 R+L A A+ +LT+ + WR + ++ T+ +I+ YP F + N PV Y S + +AL G+++E +++H E + H +R + +ID++GM D+V+ + +SF+ H+PER ++I+ +P F IW I + PV T +K+ ++ +GH + +A M ++P Sbjct: 96 RYLRATNNDAQEAQRRLTETLLWRSQYGMDQILSLPHTQFDII-------KRYYPHAF---HLQGWNNEPVYYESPAKINLEALKQNGLSLENLIRHYALITEFMWSYVSPHQHGPMSRGI-TVIDLDGMRMRDFVGDVVTFVKRAASFTSQHYPERAGTIYILNSPPFFQVIWRMIKPLVDPV-TLDKVRVVQNNQGHFAIRDALMERIP 294
BLAST of NO01G02770 vs. NCBI_GenBank
Match: CCA24767.1 (SEC14 cytosolic factor putative [Albugo laibachii Nc14]) HSP 1 Score: 71.2 bits (173), Expect = 6.500e-9 Identity = 47/191 (24.61%), Postives = 89/191 (46.60%), Query Frame = 0 Query: 101 RFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVDDAFFLEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITIL 292 RF+ A +G+ KE+ + ++WR++ + ++ R + YP F G N PV Y + L G+++E ++ H + Y T+ L+++ E A + ++D++G+ +++ + S+F+ H+PER +FII P F IW + I PV T+ K+ +L Sbjct: 456 RFIAAEKGNEERGKERYLQTLSWRKENDVDQILRRPHRNFENIKKC-----YPQYFHGRSKAGN---PVYYEKPGKIDLLVLKQLGLSIEDLIYH--YMYITE--FLWTYIEPDDAARSITVLDVSGIGMSSLGGEVLDFIKRASTFTAAHYPERSAHIFIINIPGWFNMIWRIVKPLIDPV-TREKVHML 633
BLAST of NO01G02770 vs. NCBI_GenBank
Match: XP_005828227.1 (hypothetical protein GUITHDRAFT_112715 [Guillardia theta CCMP2712] >EKX41247.1 hypothetical protein GUITHDRAFT_112715 [Guillardia theta CCMP2712]) HSP 1 Score: 68.9 bits (167), Expect = 3.200e-8 Identity = 58/210 (27.62%), Postives = 95/210 (45.24%), Query Frame = 0 Query: 101 RFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVD-----DAFFLEQYPCIFLGYEDEANNYAPVVY-RSLTHLQTKALAAKG-VTVEKMVKHELWQYE-TDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITILHTFEGHLWLEA 303 RFLVA + L A + + +D+ WRE K+ E++ RT E++ + E +P FLG PV+Y R + L +T E + ++ +W E K+ F Q V++D+ G GQ T + + F+ + LH+PER K+F+I P F W+ + + V T+ KI + + E W+ A Sbjct: 36 RFLVARKHKLKDAMKMIRQDLEWRETEKVLEIRNRTSREVLNAEINPQGKQLHDELFPHGFLG---TCRMGRPVLYLRFGRDFDAEKLDKNAHLTHEDLARYNIWMMERVAAKMNFE-------GQWVVVVDLEGWHLGQMTIRNMKYVKQFADKNSLHYPERAGKIFLINVPSVFSKCWSLMKPWLDDV-TREKIGLYRSPE--QWIPA 232
BLAST of NO01G02770 vs. NCBI_GenBank
Match: XP_009830010.1 (hypothetical protein H257_06483 [Aphanomyces astaci] >ETV80086.1 hypothetical protein H257_06483 [Aphanomyces astaci]) HSP 1 Score: 67.8 bits (164), Expect = 7.200e-8 Identity = 45/193 (23.32%), Postives = 91/193 (47.15%), Query Frame = 0 Query: 101 RFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVDDAFF---LEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITI 291 RF+ A +G++ + + + WR + ++ + ++ + F + YP F G + + V Y + + KA+ A G+T+E++++H ++ E +L E + + ++D+ G+ + T D++ + F H+PER ++FI+ P+ F +W + I PV TK KI I Sbjct: 482 RFIAAEKGNVDKGRVRYENTLQWRRENRV--------DGMLHIPQPHFHLIKKNYPQYFHGQSIKGH---CVYYEKVGKIDLKAMKAAGLTIEQLLRHYIYLTEYMWTIL----EPSDSGRSVTVLDVEGIGFYDLTGDVMDFVRQAMGFVSAHYPERSAQIFIVNVPRWFDVVWRVVSPMIEPV-TKEKIRI 658
BLAST of NO01G02770 vs. NCBI_GenBank
Match: CCI49934.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 67.4 bits (163), Expect = 9.400e-8 Identity = 48/208 (23.08%), Postives = 95/208 (45.67%), Query Frame = 0 Query: 101 RFLVANEGHLAHAKEQLTKDIAWREDIKLYELQGRTREEIVGVDDAFFLEQYPCIFLGYEDEANNYAPVVYRSLTHLQTKALAAKGVTVEKMVKHELWQYETDCKLLFSHPESFPARQLKVIIDINGMTWGQCTKDLVSILSGFSSFSKLHHPERLQKLFIIGAPKPFLFIWNTIISHIIPVSTKNKITILHTFEGHLWLEAWMAKLP 309 R+++A +G A A E+ + +AWR++ +L + R + + YP Y PV Y + KAL + G+ ++ + L Y + L+ E ++ ++D+ G+ + + + + +S ++ H+PER +FII P F IWN ++ ++ T+ K+TI+ + LEA +++P Sbjct: 617 RYVIAAKGDPARALERYQQTLAWRKEEELDSILLRPWPYL-----EIIKQNYPHF---YHKRGKEGEPVYYEKPGQINLKALKSAGIQLDDL----LHNYLLVTEFLWQVVEKDDMKKCISVVDVQGIGFSDFAGETIEYVRKAASITEKHYPERCAYIFIINVPSWFSMIWN-VVKGMVDEVTQTKVTIVRGKK--QILEALQSRIP 809 The following BLAST results are available for this feature:
BLAST of NO01G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02770 ID=NO01G02770|Name=NO01G02770|organism=Nannochloropsis oceanica|type=gene|length=2046bpback to top protein sequence of NO01G02770.1 >NO01G02770.1-protein ID=NO01G02770.1-protein|Name=NO01G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bpback to top Synonyms
Publications
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