Naga_100007g111, gene1420 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g111
Unique Namegene1420
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:715471..717556 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g111
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:715471..717556 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02770NO01G02770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1470rna1470-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1471rna1471-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1472rna1472-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1470rna1470Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1471rna1471Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1472rna1472Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1470

>rna1470-protein ID=rna1470-protein|Name=rna1470|organism=Nannochloropsis gaditana|type=polypeptide|length=255bp
MRKSISLKVKHPYRKEFLSSIVLLSQLNSFWEANYHESRCSLFWRFLVAN
DGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLC
LGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRL
LFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERL
QKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKM
CPSLE
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protein sequence of rna1471

>rna1471-protein ID=rna1471-protein|Name=rna1471|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MERQRDILECQYNQEKFRERGQQADQQSALVDATQSIDVVPSYVGGRQPL
PEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVI
RAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFED
GSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHP
ESFPPRQLKVRIF
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protein sequence of rna1472

>rna1472-protein ID=rna1472-protein|Name=rna1472|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MERQRDILECQYNQEKFRERGQQADQQSALVDATQSIDVVPSYVGGRQPL
PEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVI
RAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFED
GSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHP
ESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYI
IGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE
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Synonyms
Publications