NO01G00260, NO01G00260 (gene) Nannochloropsis oceanica

Overview
NameNO01G00260
Unique NameNO01G00260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2214
Alignment locationchr1:43955..46168 +

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Properties
Property NameValue
DescriptionProtein kinase domain containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:43955..46168 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of NO01G00260 vs. NCBI_GenBank
Match: EWM28941.1 (protein kinase domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 525.0 bits (1351), Expect = 3.700e-145
Identity = 254/291 (87.29%), Postives = 275/291 (94.50%), Query Frame = 0
Query:   65 TTIQDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEVASRLDLVRHKLPKDLPASLPLTPA 356
            TTIQDFHVL+KLGLGAYGSVYQV+RKAD+HTYA+KRVNL+GLDQRDLAMALNEIRLL+SFRHPRIIRCYETF+DGPTHLCIVMEYCGFQDLARKIQRYR RGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLD+EGNAKLGD+NVSK LDDETGE+ +V GTLPYMAPEIWEGKPYGFA+DLYSLGCTLFELT LV PFDGP PL+LRRAVLKRQFQ+ L TD  YS +LR +IL RLLH DPAQRLTADSLM++PEVASRL+LVRHKLP DLPA+LPLTP+
Sbjct:   30 TTIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLKRQFQSDLATDTVYSHDLRHVILSRLLHHDPAQRLTADSLMQLPEVASRLELVRHKLPTDLPAALPLTPS 320          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: XP_005854281.1 (protein kinase domain protein, partial [Nannochloropsis gaditana CCMP526] >EKU22078.1 protein kinase domain protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 426.0 bits (1094), Expect = 2.400e-115
Identity = 202/222 (90.99%), Postives = 215/222 (96.85%), Query Frame = 0
Query:   65 TTIQDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLK 287
            TTIQDFHVL+KLGLGAYGSVYQV+RKAD+HTYA+KRVNL+GLDQRDLAMALNEIRLL+SFRHPRIIRCYETF+DGPTHLCIVMEYCGFQDLARKIQRYR RGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLD+EGNAKLGD+NVSK LDDETGE+ +V GTLPYMAPEIWEGKPYGFA+DLYSLGCTLFELT LV PFDGP PL+LRRAVLK
Sbjct:   26 TTIQDFHVLSKLGLGAYGSVYQVIRKADNHTYAIKRVNLEGLDQRDLAMALNEIRLLSSFRHPRIIRCYETFLDGPTHLCIVMEYCGFQDLARKIQRYRARGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDKEGNAKLGDLNVSKCLDDETGEIHAVWGTLPYMAPEIWEGKPYGFASDLYSLGCTLFELTKLVPPFDGPTPLHLRRAVLK 247          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: XP_005856094.1 (protein kinase 2-like protein [Nannochloropsis gaditana CCMP526] >EKU20269.1 protein kinase 2-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 259.6 bits (662), Expect = 2.900e-65
Identity = 138/279 (49.46%), Postives = 185/279 (66.31%), Query Frame = 0
Query:   67 IQDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEVASRLDLVRHKLPKD 346
            I+ F +L  LG GA+ SV++V R  D  TYA+K+V++  LD ++L  ALNEIRLLASF HPRI+R +ETFMDG  +LCIVMEYCG+ DLA KI+RY  R E +DERV+WVY++Q LE L ALH   VLHRD+KPAN  L E+G+ K+GDMNVSK + D  G  ++ +GT  YM+PEIW  +PY  A D++SLGC ++EL  L  PF G N   L+ AVL   F         YS++L   ++ R+L      R +A   +  PEV +R  LV++ L ++
Sbjct:    3 IEQFEILKSLGEGAFASVHKVTRLVDGKTYALKKVDVSSLDDKELLSALNEIRLLASFGHPRIVRLHETFMDG-NNLCIVMEYCGWGDLAMKIKRYVKRREYIDERVIWVYMIQILEGLKALHERNVLHRDLKPANCFLAEDGSIKIGDMNVSKVMKD--GNAKTQIGTPYYMSPEIWARRPYNHATDIWSLGCLIYELCALRPPFLGNNMSELKTAVLGGNFN---PVPSVYSKDLGS-VIARMLLAAARDRPSAAEALAYPEVNARKCLVKNVLREE 274          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: EWM23138.1 (protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 259.6 bits (662), Expect = 2.900e-65
Identity = 138/279 (49.46%), Postives = 185/279 (66.31%), Query Frame = 0
Query:   67 IQDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEVASRLDLVRHKLPKD 346
            I+ F +L  LG GA+ SV++V R  D  TYA+K+V++  LD ++L  ALNEIRLLASF HPRI+R +ETFMDG  +LCIVMEYCG+ DLA KI+RY  R E +DERV+WVY++Q LE L ALH   VLHRD+KPAN  L E+G+ K+GDMNVSK + D  G  ++ +GT  YM+PEIW  +PY  A D++SLGC ++EL  L  PF G N   L+ AVL   F         YS++L   ++ R+L      R +A   +  PEV +R  LV++ L ++
Sbjct:    3 IEQFEILKSLGEGAFASVHKVTRLVDGKTYALKKVDVSSLDDKELLSALNEIRLLASFGHPRIVRLHETFMDG-NNLCIVMEYCGWGDLAMKIKRYVKRREYIDERVIWVYMIQILEGLKALHERNVLHRDLKPANCFLAEDGSIKIGDMNVSKVMKD--GNAKTQIGTPYYMSPEIWARRPYNHATDIWSLGCLIYELCALRPPFLGNNMSELKTAVLGGNFN---PVPSVYSKDLGS-VIARMLLAAARDRPSAAEALAYPEVNARKCLVKNVLREE 274          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: OMJ90642.1 (hypothetical protein SteCoe_6917 [Stentor coeruleus])

HSP 1 Score: 214.2 bits (544), Expect = 1.400e-51
Identity = 109/266 (40.98%), Postives = 166/266 (62.41%), Query Frame = 0
Query:   66 TIQDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEV 332
            ++ +F +L KLG GAY SVY+V R AD + YA+K+V +  L++++   ALNE+R+LAS  HP II   E F D    LC+VMEY    DL +KI +Y+ RG+ + E+ +W   +Q ++ L  LH L++LHRDIK AN+ L+ +G AKLGDMNVSK   D  G + +  GT  Y +PE+WE KPY   +D++SLGC L+E  TL  PF   +   L   V+K ++         +S++L+  I+ +LL  + ++R   + ++++P V
Sbjct:    2 SLNNFEILTKLGDGAYSSVYKVRRIADGNIYALKKVKMQNLNKKEKKNALNEVRILASINHPNIISYKEAFFDDSGSLCLVMEYADNGDLYQKIVKYQKRGKYLSEKFIWNTFIQIIKGLKTLHELKILHRDIKSANVFLNIDGTAKLGDMNVSKVTKD--GLLYTQTGTPYYASPEVWEDKPYNIKSDIWSLGCVLYEAITLYPPFRADDMQGLYDKVIKGEYSL---IQGHFSKDLK-FIIKKLLQTESSKRPNCEQILKIPVV 261          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: XP_013757378.1 (NEK protein kinase [Thecamonas trahens ATCC 50062] >KNC49897.1 NEK protein kinase [Thecamonas trahens ATCC 50062])

HSP 1 Score: 211.8 bits (538), Expect = 7.000e-51
Identity = 116/270 (42.96%), Postives = 164/270 (60.74%), Query Frame = 0
Query:   76 LGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEVASRLDLVRHKLPKD 346
            +G G+YG VY+V R++D  TYA+K VN+  +  R+   A+NEIRLLAS  H  II  +E+F++    LCIV EYCG  DL   ++RYRTR  R+ E  +W Y +Q   AL  LH  +VLHRDIK  N+ L E G  KLGD+ V+K L       Q  +GT  Y++PEIW+ +PY   +D++SLGC L+E+TTL  PFD  +   L   ++K ++ A +  +  YS +L D I    L  +P  R T D L+ +P V +R+DLV  ++  D
Sbjct:   12 IGKGSYGKVYRVKRRSDGKTYALKEVNIKFMSHREREDAVNEIRLLASVNHHNIIAYFESFLEN-DKLCIVTEYCGNGDLFELLRRYRTRRRRLSEDRIWSYFLQICYALRVLHQNKVLHRDIKSPNVFLGENGTIKLGDLGVAKLLKSAMAHTQ--IGTPYYLSPEIWKSRPYNDKSDVWSLGCLLYEMTTLRHPFDATSQRALAAKIIKGRY-APISRE--YSSDLADTI-SACLQVNPNMRPTIDELLELPAVRARMDLVADEVISD 274          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: OMJ82619.1 (hypothetical protein SteCoe_16670 [Stentor coeruleus])

HSP 1 Score: 211.8 bits (538), Expect = 7.000e-51
Identity = 109/266 (40.98%), Postives = 166/266 (62.41%), Query Frame = 0
Query:   66 TIQDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEV 332
            ++ +F +L KLG GAY SVY+V R AD + YA+K+V +  L++++   ALNE+R+LAS  HP II   E F D    LC+VMEY    DL +KI +Y+ RG+ + E+ +W   +Q  + L ALH L +LHRD+K AN+ L+ +G AKLGDMNVSK   D  G + +  GT  Y +PE+W+ KPY   +D++SLGC L+E + L  PF   +   L   V+K ++         +S++L+  I+ +LL  +P++R   + ++R+P V
Sbjct:    2 SLSNFDILTKLGDGAYSSVYKVRRIADGNIYALKKVKMQNLNKKEKKNALNEVRILASINHPNIISYKEAFFDDSGSLCLVMEYADNGDLYQKIVKYQKRGKYLSEKFIWSTFIQITKGLKALHELNILHRDMKSANVFLNMDGTAKLGDMNVSKVTKD--GLLYTQTGTPYYASPEVWQDKPYNTKSDIWSLGCVLYEASALHPPFRADDMQGLYDKVIKGEYSL---IQGHFSKDLK-FIIKQLLQIEPSKRPGCEQILRIPAV 261          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: GAX80415.1 (hypothetical protein CEUSTIGMA_g7854.t1 [Chlamydomonas eustigma])

HSP 1 Score: 210.7 bits (535), Expect = 1.600e-50
Identity = 115/288 (39.93%), Postives = 179/288 (62.15%), Query Frame = 0
Query:   68 QDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEVASRLDLVRHKLPKDLPASLPLTPA 356
            Q+F V+  LG G+YG+VYQV R +D+ TYA+K +++  ++Q +   A NEIRLLAS +HP II   E F+DG   LCI+MEY    DLA+ I++Y+     + E ++W Y +Q    ++ALH+L++LHRDIKP NI++     AK+GD+ ++K L  +T   ++ +GT  YM PEIW+ +PY F +D +++GC L+E+ TL  PF+  +   L+  VL+ ++ A  +T   YSQ+L  +I    L P+P +R + D ++    V SR+    H LP +  A  P + A
Sbjct:   19 QNFKVVKLLGKGSYGTVYQVQRLSDNQTYALKEMDVRAMNQAEREDATNEIRLLASVQHPNIISYNEAFLDG-NRLCIIMEYAQDGDLAKVIKKYQLLKRSMPEDLIWKYFIQTARGVAALHSLKILHRDIKPGNIMIMANEVAKIGDLGIAKLL-KQTMAAKTQIGTPHYMPPEIWKNRPYSFTSDSWAMGCILYEMATLKVPFEARSVNELKYKVLQGRYPAVPNT---YSQDLIQMI-RDCLDPNPDRRPSMDQILATRAVQSRM----HLLPNESGAKAPPSTA 296          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: XP_001703131.1 (NimA-related protein kinase 2 [Chlamydomonas reinhardtii] >AAQ64683.1 NIMA-related kinase 2 [Chlamydomonas reinhardtii] >PNW75791.1 hypothetical protein CHLRE_12g560350v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 207.6 bits (527), Expect = 1.300e-49
Identity = 107/274 (39.05%), Postives = 170/274 (62.04%), Query Frame = 0
Query:   68 QDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEVASRLDLVRHK 342
            + F VL  LG G+YGSV+ V R AD  TYA+K +++  + Q +   ++NEIRLLAS  HP ++   E F+DG   LCI+MEY    DLA+ I++ +     + E ++W Y +Q +  L ALH++++LHRDIKP NI++ + G AK+GD+ ++K L  +T   ++ +GT  YM PEIW+ +PY + +D +++GC L+EL  L  PF+  +   LR  VL+  +    +T   +S++L+ ++    L P+P +R T D ++    VASR  LV H+
Sbjct:    9 RQFKVLKFLGKGSYGSVFLVQRLADSQTYALKEMDVRSMSQAEREDSINEIRLLASVNHPNVVCYNEAFLDG-NRLCIIMEYAADGDLAKVIKKQQMMKRPLPEDMIWKYFIQVVMGLQALHSMKILHRDIKPGNIMVFDNGVAKIGDLGIAKLL-TKTAAAKTQIGTPHYMGPEIWKNRPYSYTSDTWAIGCLLYELAALAVPFEARSMSELRYKVLRGTYPPIPNT---FSRDLQQMV-RECLDPNPDKRPTMDQILASAAVASRAKLVPHE 276          
BLAST of NO01G00260 vs. NCBI_GenBank
Match: KXZ44006.1 (hypothetical protein GPECTOR_75g730 [Gonium pectorale])

HSP 1 Score: 207.6 bits (527), Expect = 1.300e-49
Identity = 108/275 (39.27%), Postives = 172/275 (62.55%), Query Frame = 0
Query:   68 QDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKRVNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYCGFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKPANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYGFAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYSQELRDLILLRLLHPDPAQRLTADSLMRVPEVASRLDLVRHKL 343
            + F VL  +G G+YGSV+ V R  D  TYA+K +++  + Q +   ++NEIRLLAS  HP +I   E F+DG   LCI+MEY    DLAR I++ +     + E ++W Y +Q +  L ALH +++LHRDIKP NI++ + G  K+GD+ ++K L  +T   ++ +GT  YM PEIW+ +PY + +D +++GC L+EL+TL  PF+  +   LR  VL+  +    +T   +S++L+ L+    L P+P +R T D+++  P VASRL L+  ++
Sbjct:    9 RQFKVLKFVGKGSYGSVFLVQRLVDGQTYALKEMDVRSMSQAEREDSINEIRLLASVNHPNVISYNEAFLDG-NRLCIIMEYAADGDLARVIKKQQQMKRPLPEDLIWRYFIQVVMGLQALHGMKILHRDIKPGNIMVFDTGVVKIGDLGIAKLL-TKTAAAKTQIGTPHYMGPEIWKNRPYSYTSDTWAVGCLLYELSTLSVPFEARSMSELRYKVLRGTYPPIPNT---FSRDLQQLV-RECLDPNPDKRPTMDAILANPAVASRLKLLPQQI 277          
The following BLAST results are available for this feature:
BLAST of NO01G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28941.13.700e-14587.29protein kinase domain containing protein [Nannochl... [more]
XP_005854281.12.400e-11590.99protein kinase domain protein, partial [Nannochlor... [more]
XP_005856094.12.900e-6549.46protein kinase 2-like protein [Nannochloropsis gad... [more]
EWM23138.12.900e-6549.46protein kinase [Nannochloropsis gaditana][more]
OMJ90642.11.400e-5140.98hypothetical protein SteCoe_6917 [Stentor coeruleu... [more]
XP_013757378.17.000e-5142.96NEK protein kinase [Thecamonas trahens ATCC 50062]... [more]
OMJ82619.17.000e-5140.98hypothetical protein SteCoe_16670 [Stentor coerule... [more]
GAX80415.11.600e-5039.93hypothetical protein CEUSTIGMA_g7854.t1 [Chlamydom... [more]
XP_001703131.11.300e-4939.05NimA-related protein kinase 2 [Chlamydomonas reinh... [more]
KXZ44006.11.300e-4939.27hypothetical protein GPECTOR_75g730 [Gonium pector... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL007nonsL007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR042ncniR042Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009788NSK009788Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G00260.1NO01G00260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100943g1gene1667Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G00260.1NO01G00260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G00260 ID=NO01G00260|Name=NO01G00260|organism=Nannochloropsis oceanica|type=gene|length=2214bp
ATGCAGCCCTTACAACGAAATCATCATACCACTTTACCGCTTACCACAGT
AATCTTGACGTGTGTAATCCACCCAAGCTCCTCCGCCCCCAAGGAGGGCC
TCAAGCTCAGTCGTATGGGAGACTCGACATCTGCCCCCTCCTCCTTCTCC
TCCTTGCCTTCCTTCCCCTCCTACCCCCCTTCTTCCTCTTTCACGACCAT
TCAAGACTTCCACGTCTTGGCCAAACTCGGTCTGGGTGCTTATGGAAGCG
TGTACCAAGTTGTGCGCAAGGCCGACCACCACACATACGCTATGAAGCGC
GTCAATCTTGATGGTCTGGATCAACGTGATCTGGCAATGGCTTTGAATGA
AATTCGGCTACTCGCCTCCTTTCGCCACCCGCGCATCATCCGCTGCTACG
AGACTTTCATGGACGGACCTACACACCTGTGCATTGTTATGGAGTACTGC
GGCTTCCAGGACCTGGCCCGCAAGATTCAGCGGTACCGGACGAGGGGGGA
GCGAGTGGACGAACGCGTGGTGTGGGTATACTTGGTGCAGTGCTTGGAGG
CCCTGTCAGCATTGCATGCCTTGCGTGTACTCCATCGTGACATCAAGCCC
GCGAACATTCTGCTGGACGAGGAGGGGAATGCCAAGCTGGGGGACATGAA
CGTGTCCAAGTCCCTGGACGACGAGACAGGCGAGGTGCAATCGGTCATGG
GTACGCTGCCCTACATGGCCCCTGAGATCTGGGAGGGCAAGCCATACGGA
TTCGCCGCCGATCTATACTCCCTCGGTTGCACGCTCTTCGAGCTCACGAC
CCTCGTACAGCCCTTCGATGGGCCCAACCCTCTTTACCTAAGGCGGGCCG
TGCTCAAGCGCCAGTTTCAGGCACGGCTGGACACGGATGACTTCTACTCT
CAGGAATTGCGAGACCTGATCCTCCTCCGCCTCCTACATCCTGATCCTGC
CCAGCGTCTCACCGCCGACAGCCTCATGCGGGTGCCCGAGGTAGCCTCTC
GGTTGGACTTGGTGCGGCACAAGCTCCCCAAGGACTTGCCCGCCTCCCTC
CCCCTCACCCCTGCTGCCTTGCTGATACATCATTTGAACAGCAATGGCGG
TAATAGCAGCAGCAGCGGTAGCAGCAATAGCAAAGAGGAAGAAGGTGTGG
ATACAGGCGCAGAAACACCAAGCAGCAGGAGGATCATTGTCACCGCCACT
AGCACCAACTACACCAGCAGCAGTAACAACAACAACAACGACAACGACAC
CACCGTGAACAGTCTGTCGCTGACGCTGGAAGAACTGCCTTTCCTCCTAC
CCCACCTCCTACCGGGGCCCTCTTACCCTACTCTTTCTCCTCCTCCTTCT
CCTCCTTCTCCCTCTGCCACACCGAACGTCAACAGAAGCAACAGCAGGAG
CAATAACAGCATTGACACTCCAAGCAATGCGACATTCCTCCCTTCTCCTC
TTCCGCCCTCCCTTTCCCTTTCCAGGCCTGAGGTGACGCGGGAAGACTCG
CTGACGGCCTTGCTCCGCTCGCCCTTCGCCACCTCCTCCTCCGGCACCAC
CAGCAGGACTACTATTGAGACAAAGCCGCCGGTGGGGGAGGGAGGAGGAG
ATGTGGTCACGACTCACCAGCGACACTGCAGGGAGGAAGGACAGACACTC
GTGCACTCTTTATCTTCTCCCGTGGCCTCTGCTCCCTGCTCCTCGTCGTC
CCCGGGAGCATCAGTCATGTCACCGCCCTCCGCAGCAGCGACGATGACCA
CCACCACCGACGGGGCAGCAGCGACAGCAGTCGCAGGCAAGCCCAGACAT
GGGGGCAAGCGCCCGAGGAAGAAACGGCCCGACTCCTTGTCTACCGCCAG
TATGACAACCGCGCCCGCCTCCTCCGCCTTGGAGAGCAGTGCCTCCCTCC
TGCATAGCCTCTCCCTCGATCAGACTCCAGACAATGTCTGCGAGGAAAGG
GAGGAAGGCGGGGAGGGAAATTCGAGGGAAAAGCTTAACAGCGAAGGGCA
AGTGCAATGGGAGGCCTTACCTACGCCGAATTCTTTCCCCCTCCCTCTCT
TGTCGCCCTGTCCCGCCAGCCCTCCCTTTGAGCAGCAGCTGATGGTCAGG
AGGGAGGGGGGAAAGGTTGAAGGAGGAGAGGGGGAGGAGGGAGGAGGAAA
TGAGGGGCTTATAAAGGGGGAGGAAAGAGAGGGGCTAGACGGATGTCTCA
CTGATAAAAAATAA
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protein sequence of NO01G00260.1

>NO01G00260.1-protein ID=NO01G00260.1-protein|Name=NO01G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=738bp
MQPLQRNHHTTLPLTTVILTCVIHPSSSAPKEGLKLSRMGDSTSAPSSFS
SLPSFPSYPPSSSFTTIQDFHVLAKLGLGAYGSVYQVVRKADHHTYAMKR
VNLDGLDQRDLAMALNEIRLLASFRHPRIIRCYETFMDGPTHLCIVMEYC
GFQDLARKIQRYRTRGERVDERVVWVYLVQCLEALSALHALRVLHRDIKP
ANILLDEEGNAKLGDMNVSKSLDDETGEVQSVMGTLPYMAPEIWEGKPYG
FAADLYSLGCTLFELTTLVQPFDGPNPLYLRRAVLKRQFQARLDTDDFYS
QELRDLILLRLLHPDPAQRLTADSLMRVPEVASRLDLVRHKLPKDLPASL
PLTPAALLIHHLNSNGGNSSSSGSSNSKEEEGVDTGAETPSSRRIIVTAT
STNYTSSSNNNNNDNDTTVNSLSLTLEELPFLLPHLLPGPSYPTLSPPPS
PPSPSATPNVNRSNSRSNNSIDTPSNATFLPSPLPPSLSLSRPEVTREDS
LTALLRSPFATSSSGTTSRTTIETKPPVGEGGGDVVTTHQRHCREEGQTL
VHSLSSPVASAPCSSSSPGASVMSPPSAAATMTTTTDGAAATAVAGKPRH
GGKRPRKKRPDSLSTASMTTAPASSALESSASLLHSLSLDQTPDNVCEER
EEGGEGNSREKLNSEGQVQWEALPTPNSFPLPLLSPCPASPPFEQQLMVR
REGGKVEGGEGEEGGGNEGLIKGEEREGLDGCLTDKK*
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Synonyms
Publications