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Properties
| Property Name | Value |
|---|
| Product | chaperonin containing tcp1 theta subunit |
| Orig transcript id | gnl|cribi|Naga_100023g44.3992.mrna |
| Orig protein id | gnl|cribi|Naga_100023g44.3992 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:455701..457718 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8056 ID=rna8056|Name=rna8056|organism=Nannochloropsis gaditana|type=mRNA|length=1494bp
GAAAGCTTTTCAGGAAATGATTGAGAGGGTTTCGGGTTCAGGATCTCTGT
CCCGCGGCTTTTCAACACCAATTTTACTAGATCTAGCAGGATAAGACTAA
AAGCAAGCAGAAACTCCTGTCTGAGCTCAGGTTTGCGGGGGACACCGGCA
AACTACGGAGTGTAATTAAAGCCCTCTGCTGGCTGAGGCTCGGAACGGAA
TGCGTTCTCGGCGCCCTGACTTTTCTTAATTAACACGTTTTAAACCCATT
TTAGTCTCTGTAAAGGGAAGCTATTCATCGAAAGAATCCCACAGAAGAAA
GAATGGAAAGAGGTACCCATTGGCAGCGGAGGCAGCGTCCCTTGCGTAAC
CTCTGCCTGTTTGCTTCACTTCGGCGGAGCCGGGCCATGATGGAAACACA
GCATATACCCAGTGGAGCCTTAGAAACTGTCCGCACAGCGCCAAAAGGAC
GGCTGCCAGACTACCAGTCACCGGGCCAGGAGCAAAATGGGTCGCAAATC
CACTGTCGTTTACGCAGAGAAGGATGCCACCGCTATTCGGAATCTCAAGA
GGAATCAAACCGCCCCCTTTTCAGCCACGGAGATAGGGGACAAGGAGAAA
GGGCGGATGGACGAAGCCCCCATCCTCATCTTTGTCCCCCGCCTTCCTCT
TGCCCGGGCACCACCTCCTCGTCCCAGCTCAGTACACATACCCCACTTCA
GCCTGAGACCCAGCTCCCGAGCGCTGAAATCACCCCTACTGGTATGGGTG
ACAACGGTTTGCCCTCCCAATTGCCCATATTTAGCGTCACCTCAGAGGAT
GATACCAATCTCTGCGGATCCGGGAACCGGCTTGTTGAAATCAGGGCCAC
TCCCAGCCATCCTCCCGCCCAGGCACAAGAAGAGGAGGAGGCGGGAGGTG
GAGGTGGAGGGCGTGCCTCAGTAGGTACCTGGAAAGCTTCTGCCTTCCGT
GTACCGACAGCTAACCTATTTCCCGTCCACGGCGAGCTGAGCGCAGTCCG
AGCGCGGCAAAGCGAGCAGCTCGCCACTCTGCGCGCTCGAGGACAAGAGA
GTTCGTACCTATACGTGATGCAGGAGATGGCCCTGCGAGTGTTGGAGCGC
GAGGAACTTGAGTACGTGGTGGTGAAAAATGAGGACAGGAGACGGAAGGG
CCGAGTCTGGTGGGGAAGGAGGAAGTGCAAGAGCGCGGACGGCCCACAAG
AGCTCAACCGCGCGCTGAAGGAGCTACAGCGAGGGCTCCTTGATCCGGTT
GGATTGGGTCCAAATACTCGTTTCTTGGGACTCACCTCGGACGTGCTGGC
TGAGATAAGTCTGTTCGCACAGGGCTACCAAGGGGGGCCCGGGGGGGTGA
AATCCCGGTAGGGGCAGGGGAAACGCTCGGTTCGGACTAGGCTTGTCATT
CGCCGGCGAGCCAGAATGCGTACGAAAGCAACATAAAATAAAAGACAAAG
ACATGTACAAAACAAAACGAGAAAAATCAAATGTCAAGTGGAGC back to topprotein sequence of rna8056 >rna8056-protein ID=rna8056-protein|Name=rna8056|organism=Nannochloropsis gaditana|type=polypeptide|length=544bp
MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMG
PNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECG
DATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTT
HTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKP
SLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCG
IEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGG
SISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAG
FVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDG
VNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEAL
EVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVGDKGVLDS
LAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKPPSGGGGDED back to topmRNA from alignment at KK037247.1:455701..457718+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8056 ID=rna8056|Name=rna8056|organism=Nannochloropsis gaditana|type=mRNA|length=2018bp|location=Sequence derived from alignment at KK037247.1:455701..457718+ (Nannochloropsis gaditana)
CGCACACTGCGGCATAAAAAAAAAGTCTCGCGGGGGGGGGTTCCACTTCA
CATAATTGTTGTCATGGATATTCTCCCAAGCATGTCCCCGAAGGATAGCA
GCAATCTCTGACCGGTACACTGACAAATTCGCCTCCCCGTCAaattccct
cctgcctccctgtcgGACCtacagaaaaagaggaagtcaACATGTCCCGC
AGTCTAAATTACAACCAGGCAGCAGGCCTGCAGGGCatgttgaaggaggg
cagtAAGAGCTTAGAAGGCGTGGACGAAGCAGTGATTCGCAATATTGAGG
CGGCAAAGCAGCTGGCAGGCATTTGTAGTTCCTCCATGGGGCCGAATGGC
TTAAAAAAATTGGTGGTCAATCACCTGGAAAAGATAATTGTTACAAGTGA
TTGTGCAACAATATTGAAGGAGTTGGAAGTGCAGCATCCCGCAGCGAAAA
TGTTGGTGATGGCGGCTATgatgcaggagaaggagtgcGGAGATGCCACG
AATTTCACAGTCTCCTTCGCCGGCGAGCTCTTAAAGAAGGCCGAGGATCT
GCTGCATAAAGGGCTACACACGAGCGAAATTGTGGCAGGATACAGAGTAG
CTTTTGATAAAGCGATGGAAATATTGCCCACTTTAACGACACACACAGTC
CAGGATCCGCGAGACGCACAGCAAGTAATCCGCGTGCTGGAGTCAGTATT
GGGTACCAAATACTTTGGCTATGAGGGCACGCTTGCCCCGTACGTCGCGC
AGGCATGTCAAGCTGTCATGCCACCGGCACCGCGGAAGCCCTCTTTAAAT
GTGGACTCGGTACGGGTCTGTAAGCTGATGGGCGGCACCATAGGGGACAG
CCTGGTCATGAAGGGCGTCGTGGTCTCGCGCAACACGGAGGGCACCATCA
AGCGCGCTCTGAAGGCCAAGGTTGCGGTCTTCGGCTGCGGCATAGAGGCG
TCGTCTACGGAGACGAAAGGCACGGTCCTGATTCGAAATGCGGAGGAGCT
TCTTAACTACAacaagggcgaggagaagctgaTGGAAGACATCATCAAGT
CCATCGCCGACTCGGGGGTGCAGGTGCTGGTCACGGGCGGCTCTATCTCT
GAAATGGCCTTGCACTTCCTGGAACGCTACAAGCTCATGGTGGTGAAGAT
TCAGTCAAAGTGGGAACTGCGACGGCTCTGCGGGGCGGTGAACGCCACGG
CGCTGGTCCGCCTGGGGGCCCCCACGCCCGAGGAGGCCggctttgtggac
cgagccgaggtgcgggaggtggggggcaggaaggtgACGGTcttcgagca
ggaggcggaggagtcgCGCGTGGCCTCCATCATTCTCCGTGCCAGCACGC
AGAACGTGCTCGAGGATCTGGAGCGGGCCGTGGACGACGGCGTGAACACG
GTCAAGGTGCTCTGCCAGGACGGGCGATTCCTCCCCGGGGCCGGAGCGGT
GGAGATCGAGCTGGCCCGGCGCATCGCCAAACTTGCGGATGCCTCGACCG
GCTTGGATCAGTACGCGATGCGGAAATTTGCGGAGGCGTTGGAGGTGGTG
CCAAGGACGCTGGCAGAGAGCTCAGGGCAGGAGGCAACGGACACCGTCAC
AGCCCTCTACGCCGAGCATGAGAAGGGCAAGTTGGGCGTTGGGGTGGACG
CCGAGGGCGCAGGGGTGGGGGACAAAGGGGTGCTGGACTCCCTGGCGGTG
AAAGACTCGGCGCTGCGGCTGGCGGTGGACGCAGCCTTGACAGTCCTGCG
CGTGGACCAGATCATCATGTCCAAACCCGCGGGGGGGCCCAAGCCGCCct
ctgggggagggggggacgaggactAGGTGGGGAACAGGCAGGTACCGCGA
CTccggcgggaggtggaagggtgCAAAAGCGGCGGGAGCGTCGTGGCATG
GGTGACTGTCACCAGAGTCACGGCCATCCCAAGAGAGACGAGCAAGAGTC
AGGGAGATGGATCCCGCATGACGCGCCGGATACttaagaagaaaagggga
caaTGGATTCTCGTTTGG back to topCoding sequence (CDS) from alignment at KK037247.1:455701..457718+ >rna8056 ID=rna8056|Name=rna8056|organism=Nannochloropsis gaditana|type=CDS|length=1635bp|location=Sequence derived from alignment at KK037247.1:455701..457718+ (Nannochloropsis gaditana)
ATGTCCCGCAGTCTAAATTACAACCAGGCAGCAGGCCTGCAGGGCatgtt
gaaggagggcagtAAGAGCTTAGAAGGCGTGGACGAAGCAGTGATTCGCA
ATATTGAGGCGGCAAAGCAGCTGGCAGGCATTTGTAGTTCCTCCATGGGG
CCGAATGGCTTAAAAAAATTGGTGGTCAATCACCTGGAAAAGATAATTGT
TACAAGTGATTGTGCAACAATATTGAAGGAGTTGGAAGTGCAGCATCCCG
CAGCGAAAATGTTGGTGATGGCGGCTATgatgcaggagaaggagtgcGGA
GATGCCACGAATTTCACAGTCTCCTTCGCCGGCGAGCTCTTAAAGAAGGC
CGAGGATCTGCTGCATAAAGGGCTACACACGAGCGAAATTGTGGCAGGAT
ACAGAGTAGCTTTTGATAAAGCGATGGAAATATTGCCCACTTTAACGACA
CACACAGTCCAGGATCCGCGAGACGCACAGCAAGTAATCCGCGTGCTGGA
GTCAGTATTGGGTACCAAATACTTTGGCTATGAGGGCACGCTTGCCCCGT
ACGTCGCGCAGGCATGTCAAGCTGTCATGCCACCGGCACCGCGGAAGCCC
TCTTTAAATGTGGACTCGGTACGGGTCTGTAAGCTGATGGGCGGCACCAT
AGGGGACAGCCTGGTCATGAAGGGCGTCGTGGTCTCGCGCAACACGGAGG
GCACCATCAAGCGCGCTCTGAAGGCCAAGGTTGCGGTCTTCGGCTGCGGC
ATAGAGGCGTCGTCTACGGAGACGAAAGGCACGGTCCTGATTCGAAATGC
GGAGGAGCTTCTTAACTACAacaagggcgaggagaagctgaTGGAAGACA
TCATCAAGTCCATCGCCGACTCGGGGGTGCAGGTGCTGGTCACGGGCGGC
TCTATCTCTGAAATGGCCTTGCACTTCCTGGAACGCTACAAGCTCATGGT
GGTGAAGATTCAGTCAAAGTGGGAACTGCGACGGCTCTGCGGGGCGGTGA
ACGCCACGGCGCTGGTCCGCCTGGGGGCCCCCACGCCCGAGGAGGCCggc
tttgtggaccgagccgaggtgcgggaggtggggggcaggaaggtgACGGT
cttcgagcaggaggcggaggagtcgCGCGTGGCCTCCATCATTCTCCGTG
CCAGCACGCAGAACGTGCTCGAGGATCTGGAGCGGGCCGTGGACGACGGC
GTGAACACGGTCAAGGTGCTCTGCCAGGACGGGCGATTCCTCCCCGGGGC
CGGAGCGGTGGAGATCGAGCTGGCCCGGCGCATCGCCAAACTTGCGGATG
CCTCGACCGGCTTGGATCAGTACGCGATGCGGAAATTTGCGGAGGCGTTG
GAGGTGGTGCCAAGGACGCTGGCAGAGAGCTCAGGGCAGGAGGCAACGGA
CACCGTCACAGCCCTCTACGCCGAGCATGAGAAGGGCAAGTTGGGCGTTG
GGGTGGACGCCGAGGGCGCAGGGGTGGGGGACAAAGGGGTGCTGGACTCC
CTGGCGGTGAAAGACTCGGCGCTGCGGCTGGCGGTGGACGCAGCCTTGAC
AGTCCTGCGCGTGGACCAGATCATCATGTCCAAACCCGCGGGGGGGCCCA
AGCCGCCctctgggggagggggggacgaggactAG back to top
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