Naga_100023g44, gene7800 (gene) Nannochloropsis gaditana

Overview
NameNaga_100023g44
Unique Namegene7800
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:455701..457718 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100023g44
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:455701..457718 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL062ngnoL062Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01380NO21G01380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8056rna8056-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8056rna8056Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8056

>rna8056-protein ID=rna8056-protein|Name=rna8056|organism=Nannochloropsis gaditana|type=polypeptide|length=544bp
MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMG
PNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECG
DATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTT
HTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKP
SLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCG
IEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGG
SISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAG
FVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDG
VNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEAL
EVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVGDKGVLDS
LAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKPPSGGGGDED
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Synonyms
Publications