EWM22676.1, cds8034 (CDS) Nannochloropsis gaditana

Overview
NameEWM22676.1
Unique Namecds8034
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:455892..457526 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22676.1
Productchaperonin containing tcp1 theta subunit
Orig transcript idgnl|cribi|Naga_100023g44.3992.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:455892..457526 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0051082unfolded protein binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027409GroEL-like_apical_dom
IPR027413GROEL-like_equatorial
IPR027410TCP-1-like_intermed
IPR012721Chap_CCT_theta
IPR002423Cpn60/TCP-1
IPR017998Chaperone_TCP-1
Homology
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|585103241|gb|EWM22676.1| (chaperonin containing tcp1 theta subunit [Nannochloropsis gaditana])

HSP 1 Score: 1100.5 bits (2845), Expect = 0.000e+0
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVGDKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKPPSGGGGDED 544
            MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVGDKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKPPSGGGGDED
Sbjct:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVGDKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKPPSGGGGDED 544          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|1214706842|gb|OWZ18326.1| (T-complex protein 1, theta subunit [Phytophthora megakarya])

HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0
Identity = 330/542 (60.89%), Postives = 422/542 (77.86%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEG-------AGVGDKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            MS+S+  N A GL  MLK+G K  EGVDEAV +NI+A KQLA I  SS+GPNG+ KLV+NHLE+I VTSD ATI+KELEV HPAA+M+VMAA MQE + GD T   V+ AGELL +A  LL  GLH SEIV GY+ A DK  EIL  L +  V+D RD Q++ + +++ L +K +GYE  LA  VA+AC  VMP AP+KPS+NVD++RV K+MGG + DS V++G+V+ RNTEG +K+ALKAKVAVFGCGIE SSTE K TVLI++A+EL+NYNKGEEK +ED I++I++SG  V+V+GGSISEMALHFLE+Y LM VKIQSKWELRRLC AVNA A+VRLGAPTP+E GF D   V+E+GG+KVT+F+Q+ E++++++I+LRAST NVL D+ERA+DDGVN VK +C+DGRF+ GAG+ EIEL+R+I    +A+ GLDQYA++KF +A+EVVPR LAE+SGQ AT+ +++LYA H  G +  GVD +        +   DKG+ D L  K SA+RL  DAA+TVLRVDQIIM+K AGGPKP
Sbjct:    1 MSKSMGLNVAGGLSSMLKDGHKHFEGVDEAVAKNIDAVKQLAAITRSSLGPNGMNKLVINHLERIFVTSDTATIVKELEVIHPAARMVVMAAKMQENDFGDGTCLVVALAGELLMEAASLLRMGLHASEIVTGYQKAHDKCQEILQKLQSVQVKDTRDQQELQKAIKTSLASKQYGYEDLLAKLVAEACLNVMPAAPKKPSINVDNIRVAKIMGGNLHDSSVIRGMVIQRNTEGNVKKALKAKVAVFGCGIEISSTEAKSTVLIKDADELMNYNKGEEKHLEDAIRAISESGAAVVVSGGSISEMALHFLEKYNLMAVKIQSKWELRRLCRAVNANAMVRLGAPTPDEMGFCDSVTVKEIGGKKVTIFQQDEEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKSFGEATPGLDQYAIKKFGDAIEVVPRILAENSGQMATEVISSLYASHAAGNVSAGVDVDNEQESHVISDALDKGIWDHLQTKMSAIRLGADAAITVLRVDQIIMAKAAGGPKP 542          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|566011528|gb|ETI34439.1| (T-complex protein 1, theta subunit [Phytophthora parasitica P1569] >gi|567949005|gb|ETK74741.1| T-complex protein 1, theta subunit [Phytophthora parasitica] >gi|568037017|gb|ETM34615.1| T-complex protein 1, theta subunit [Phytophthora parasitica])

HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0
Identity = 330/542 (60.89%), Postives = 422/542 (77.86%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVG-------DKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            MS+S+  N A GL  +LK+G K  EGVDEAV +NI+A KQLA I  SS+GPNG+ KLV+NHLE+I VTSD ATI+KELEV HPAA+M+VMAA MQE + GD T   V+ AGELL +A  LL  GLH SEIV GY+ A DK  EIL  L +  V+DPRD +++ + +++ L +K +GYE  LA  VA+AC  VMP AP+KPS+NVD++RV K+MGG + DS V++G+V+ RNTEG +K+ALKAKVAVFGCGIE SSTE K TVLI++AEEL+NYNKGEEK +E+ +++I++SG  V+V+GGSISEMALHFLE+Y LM +KIQSKWELRRLC AVNA ALVRLGAPTP+E GF D   V+E+GG+KVTVF+Q+ E++++++I+LRAST NVL D+ERA+DDGVN VK +C+DGRF+ GAG+ EIEL+R+I    +A+ GLDQYA++KF EA+EVVPR LAE+SGQ AT+ +++LYA H  G +  GVD +            +KGV D L  K SA+RL  DAA+TVLRVDQIIM+K AGGPKP
Sbjct:   20 MSKSMGLNVAGGLSSLLKDGHKHFEGVDEAVAKNIDAVKQLAAITRSSLGPNGMNKLVINHLERIFVTSDTATIVKELEVIHPAARMVVMAAKMQENDYGDGTCLVVALAGELLMEAASLLRMGLHASEIVTGYQKAHDKCQEILQKLQSVQVKDPRDQEELQKAIKTSLASKQYGYEDLLAKLVAEACLNVMPAAPKKPSINVDNIRVAKIMGGNLHDSTVIRGMVIQRNTEGNVKKALKAKVAVFGCGIEISSTEAKSTVLIKDAEELMNYNKGEEKHLEEAVRAISESGATVVVSGGSISEMALHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFQQDEEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKSFGEATPGLDQYAIKKFGEAIEVVPRILAENSGQMATEVISSLYAAHAGGNVNAGVDVDNEQESHVIPDALEKGVWDHLQTKMSAIRLGADAAITVLRVDQIIMAKAAGGPKP 561          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|301119353|ref|XP_002907404.1| (T-complex protein 1 subunit theta [Phytophthora infestans T30-4] >gi|262105916|gb|EEY63968.1| T-complex protein 1 subunit theta [Phytophthora infestans T30-4])

HSP 1 Score: 688.723 bits (1776), Expect = 0.000e+0
Identity = 329/542 (60.70%), Postives = 421/542 (77.68%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVG-------DKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            MS+S+  N A GL  MLK+G K  EGVDEAV +NI+A KQLA I  SS+GPNG+ KLV+NHLE+I VTSD ATI+KELEV HPAA+M+VMAA MQE + GD T   V+ AGELL +A  LL  GLH SEIV GY+ A DK  EIL  L +  ++DPRD  ++ + +++ L +K +GYE  LA  VA+AC  VMP AP+KPS+NVD++RV K+MGG + DS V++G+V+ RNTEG +K+ALKAKVAVFGCG+E SSTE K TVLI++A+EL+NYNKGEEK +E+ +++I++SG  V+V+GGSISEMALHFLE+Y LM +KIQSKWELRRLC AVNA ALVRLGAPTP+E GF D   V+E+GGRKVTVF+Q+ E++++++I+LRAST NVL D+ERA+DDGVN VK +C+DGRF+ GAG+ EIEL+R+I    +A+ GLDQYA++KF EA+EVVPR LAE+SGQ AT+ +++LYA H  G +  GVD +            DKG+ D L  K SA+RL  DAA+TVLRVDQIIM+K AGGPKP
Sbjct:    1 MSKSMGLNVAGGLSSMLKDGHKHFEGVDEAVAKNIDAVKQLAAITRSSLGPNGMNKLVINHLERIFVTSDTATIVKELEVIHPAARMVVMAAKMQENDYGDGTCLVVALAGELLMEAASLLRMGLHASEIVTGYQKAHDKCQEILQKLQSVQIKDPRDQVELQKAIKTSLASKQYGYEDLLAKLVAEACLNVMPAAPKKPSINVDNIRVAKIMGGNLHDSTVIRGMVIQRNTEGNVKKALKAKVAVFGCGLEISSTEAKSTVLIKDADELMNYNKGEEKHLEEAVRAISESGATVVVSGGSISEMALHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVTVKEIGGRKVTVFQQDEEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKSFGEATPGLDQYAIKKFGEAIEVVPRILAENSGQMATEVISSLYAAHAGGNVSAGVDVDNEHESHVIPDALDKGIWDHLQTKMSAIRLGADAAITVLRVDQIIMAKAAGGPKP 542          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|675176161|ref|XP_008896965.1| (T-complex protein 1, theta subunit [Phytophthora parasitica INRA-310] >gi|567977671|gb|ETL28168.1| T-complex protein 1, theta subunit [Phytophthora parasitica] >gi|568007165|gb|ETL81409.1| T-complex protein 1, theta subunit [Phytophthora parasitica] >gi|568102727|gb|ETN17398.1| T-complex protein 1, theta subunit [Phytophthora parasitica INRA-310] >gi|570315282|gb|ETO63230.1| T-complex protein 1, theta subunit [Phytophthora parasitica P1976] >gi|570939013|gb|ETP04270.1| T-complex protein 1, theta subunit [Phytophthora parasitica CJ01A1] >gi|570969296|gb|ETP32415.1| T-complex protein 1, theta subunit [Phytophthora parasitica P10297] >gi|970629957|gb|KUF77054.1| T-complex protein 1 subunit theta [Phytophthora nicotianae] >gi|970657191|gb|KUF95107.1| Tubulin polymerization-promoting protein family member 2 [Phytophthora nicotianae])

HSP 1 Score: 688.723 bits (1776), Expect = 0.000e+0
Identity = 330/542 (60.89%), Postives = 422/542 (77.86%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVG-------DKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            MS+S+  N A GL  +LK+G K  EGVDEAV +NI+A KQLA I  SS+GPNG+ KLV+NHLE+I VTSD ATI+KELEV HPAA+M+VMAA MQE + GD T   V+ AGELL +A  LL  GLH SEIV GY+ A DK  EIL  L +  V+DPRD +++ + +++ L +K +GYE  LA  VA+AC  VMP AP+KPS+NVD++RV K+MGG + DS V++G+V+ RNTEG +K+ALKAKVAVFGCGIE SSTE K TVLI++AEEL+NYNKGEEK +E+ +++I++SG  V+V+GGSISEMALHFLE+Y LM +KIQSKWELRRLC AVNA ALVRLGAPTP+E GF D   V+E+GG+KVTVF+Q+ E++++++I+LRAST NVL D+ERA+DDGVN VK +C+DGRF+ GAG+ EIEL+R+I    +A+ GLDQYA++KF EA+EVVPR LAE+SGQ AT+ +++LYA H  G +  GVD +            +KGV D L  K SA+RL  DAA+TVLRVDQIIM+K AGGPKP
Sbjct:    1 MSKSMGLNVAGGLSSLLKDGHKHFEGVDEAVAKNIDAVKQLAAITRSSLGPNGMNKLVINHLERIFVTSDTATIVKELEVIHPAARMVVMAAKMQENDYGDGTCLVVALAGELLMEAASLLRMGLHASEIVTGYQKAHDKCQEILQKLQSVQVKDPRDQEELQKAIKTSLASKQYGYEDLLAKLVAEACLNVMPAAPKKPSINVDNIRVAKIMGGNLHDSTVIRGMVIQRNTEGNVKKALKAKVAVFGCGIEISSTEAKSTVLIKDAEELMNYNKGEEKHLEEAVRAISESGATVVVSGGSISEMALHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFQQDEEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKSFGEATPGLDQYAIKKFGEAIEVVPRILAENSGQMATEVISSLYAAHAGGNVNAGVDVDNEQESHVIPDALEKGVWDHLQTKMSAIRLGADAAITVLRVDQIIMAKAAGGPKP 542          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|1173948658|gb|OQR96764.1| (T-complex protein 1 subunit theta [Achlya hypogyna])

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 336/546 (61.54%), Postives = 427/546 (78.21%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERA----VDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEG---AGVGDK----GVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            M++S+ +N AAGL G+LK+G K  EGVDEAV +NIEA KQLA I  +S+GPNG++KLV+NHLEKI VTSD ATI++ELEV HPAAKM+VMAA MQ+ E GDATN  VS AGELL +A  LL  GLH SEIV GY+ A++KA+ IL +L  + + DPRD +Q+ +V+  V+G K  GYE  LA  +A+AC  VMP  P+ P +NVD++RVCK+MGG + DS V+KG+VV R+TEGT+K+   AKVAVFGCGIE SSTE K TVLI++A+EL+NYNKGEE  +++ I+SIA+SG +V++ GGSISEMALHFLE+Y+L+ ++IQSKWELRRLC AVNATALVRLGAPTPEE GF D   V+E+GG+K+T+F QE E++++++I+LRAST NVL DLERA    +DDGVNTVK  C++GRF+ G GA EIE+AR+I    + + GLDQYA++KFAEALE+VPRTLAE++GQ+AT  +++LYA H  GK   GVD E    +GV D      VLD LA K SALRL  D A+TVLRVDQIIM+K AGGPKP
Sbjct:    1 MAKSMGFNPAAGLSGLLKDGHKHFEGVDEAVAKNIEAVKQLADISRTSLGPNGMRKLVINHLEKIFVTSDTATIVQELEVVHPAAKMVVMAAKMQQTEHGDATNLVVSIAGELLMQAAHLLRMGLHASEIVTGYKKAYEKALTILDSLEQYRITDPRDQKQLEKVIRPVVGAKQHGYEDLLATLIAEACLNVMPNKPKAPKINVDNIRVCKIMGGNVFDSKVVKGMVVQRDTEGTVKKVEGAKVAVFGCGIEVSSTEAKSTVLIKSADELMNYNKGEEARLDEAIRSIAESGAKVVIAGGSISEMALHFLEKYQLLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDFVGVQEIGGKKITIFRQEEEDAKMSTILLRASTDNVLNDLERAIGSTIDDGVNTVKAACKEGRFVAGGGAAEIEIARQIEAYGNTTPGLDQYAIKKFAEALEIVPRTLAENAGQQATQVISSLYAAHGAGKANAGVDVECESESGVVDNMLAADVLDHLATKKSALRLGADVAITVLRVDQIIMAKAAGGPKP 546          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|1173961268|gb|OQS07315.1| (T-complex protein 1 subunit theta, partial [Thraustotheca clavata])

HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0
Identity = 334/542 (61.62%), Postives = 423/542 (78.04%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEG---AGVGDK----GVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            M++S+ +N AAGL G+LK+G K  EGVDEAV +NIEA KQLA I  +S+GPNG++KLV+NHLEKI VTSD ATI++ELEV HPAAKM+VMAA MQ+ E GD TN  VS AGELL +A  LL  GLH SEIV GY  A++KA+++L TL  H ++D RD +Q+  ++  V+G+K  GYE  LA  +A+AC  V P  P+ P +NVD++RVCK+MGG + +S V+KG+VV R+TEG++K+A  AKVAVFGCGIE SSTE K TVLI++A+EL+NYNKGEE  +++ I++IA+SG +V++ GGSISEMALHFLE+YKL+ ++IQSKWELRRLC AVNATALVRLGAPTPEE GF D   V+EVGG+KVT+F QE E++++++IILRAST NVL DLERA+DDGVN VK  C+DGRF+ G GA EIE+AR+I    + + GLDQYA++KFAEALE+VPRTLAE++GQ AT  +++LYA H  GK   GVD E    +GV D      VLD L  K SALRL  D A+TVLRVDQIIM+K AGGPKP
Sbjct:   15 MAKSMGFNPAAGLSGLLKDGHKHFEGVDEAVAKNIEAVKQLADISRTSLGPNGMRKLVINHLEKIFVTSDTATIVQELEVVHPAAKMVVMAAKMQQTEFGDGTNLVVSIAGELLMQAAHLLRMGLHASEIVTGYTKAYEKALKVLETLQLHQIKDLRDQKQLETIIRPVVGSKQHGYEDVLATLIAEACLNVFPNKPKAPKINVDNIRVCKIMGGNVLESKVVKGMVVQRDTEGSVKKAEAAKVAVFGCGIEVSSTEAKSTVLIKSADELMNYNKGEESRLDEAIRAIAESGAKVVIAGGSISEMALHFLEKYKLLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDHVAVQEVGGKKVTIFSQEEEDAKMSTIILRASTDNVLNDLERAIDDGVNIVKAACKDGRFVAGGGATEIEIARQIEAFGNTTPGLDQYAIKKFAEALEIVPRTLAENAGQMATQVISSLYAAHGAGKANAGVDVECESESGVVDNMLASNVLDHLETKKSALRLGADVAITVLRVDQIIMAKAAGGPKP 556          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|953501746|emb|CEG37195.1| (t-complex protein theta subunit [Plasmopara halstedii])

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 328/542 (60.52%), Postives = 420/542 (77.49%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEG-------AGVGDKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            M++S+  N A GL  +LK+G K  EGV+EAV +NI+A KQLA I  SS+GPNG+ KLV+NHLE+I VTSD ATI+KELEV HPAA+M+VMAA MQE + GD T   V+ AGELL +A  LL  GLH SEIV GY  A DK  EIL  L +  V+DPRD  ++ + +++ L +K +GYE  LA  VA AC  VMP AP++PS+NVD++RV K+MGG + DS V++G+V+ RNTEG IK+ALKAKVAV+GCGIE SSTE K TVLI++A+EL+NYNKGEEK +E+ +++I+DSG  V+V+GGSISEMALHFLE+Y LM +KIQSKWELRRLC AVNA ALVRLGAPTP+E GF D   V+E+GG+KVTVF+Q+ E++++A+I+LRAST NVL D+ERA+DDGVN VK +C+DGRF+ GAG+ EIEL+R+I    +A+ GLDQYA++KF EA+EVVPR LAE+SGQ AT+ +++LYA H  G +  GVD +        +   DKG+ D L  K SA+RL  DAA+TVLRVDQIIM+K AGGPKP
Sbjct:    1 MAKSMGLNVAGGLSSLLKDGHKHFEGVNEAVAKNIDAVKQLAAITRSSLGPNGMNKLVINHLERIFVTSDTATIVKELEVIHPAARMVVMAAKMQENDYGDGTCLVVALAGELLMEAASLLRMGLHASEIVTGYEKAHDKCQEILQALQSVQVRDPRDQNELEKAIKTSLASKQYGYEDLLAKLVADACLNVMPAAPKRPSINVDNIRVAKIMGGNLNDSTVIRGMVILRNTEGNIKKALKAKVAVYGCGIEISSTEAKSTVLIKDADELMNYNKGEEKKLEEAVQAISDSGATVVVSGGSISEMALHFLEKYNLMTIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVLVKEIGGKKVTVFQQDEEDAKIATIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKNFGEATPGLDQYAIKKFGEAIEVVPRILAENSGQMATEVLSSLYAAHAAGNVNAGVDVDNEQKSHVISDALDKGIWDHLQTKMSAIRLGADAAITVLRVDQIIMAKAAGGPKP 542          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|673027488|ref|XP_008867705.1| (T-complex protein 1, theta subunit [Aphanomyces invadans] >gi|574476478|gb|ETW03476.1| T-complex protein 1, theta subunit [Aphanomyces invadans])

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 331/542 (61.07%), Postives = 423/542 (78.04%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEG---AGVGDK----GVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            M++S+ +N AAGL G+LKEG K  EGVDEAV +NI+A KQLA I  +S+GPNG++KLV+NHL+KI VTSD ATI++ELEV HPAAKM+VMAA MQ+ E GDATN  VS AGELL +A  LL  GLH SEIV GY+ A++KA+EIL TL  HT++D R+  ++ +++  V+G K +GYE  LA  +A+AC  V P  P+ P +NVD++RV K+MGG + DS V+KG+VV R+TEG++K+A  AKVAVFGCGIE SSTE K TVLI+ A+EL+NYNKGEE+ +++ I++I++SG  V++ GGSISEMALHFLE+Y LM ++IQSKWELRRLC AVNATALVRLGAPTPEE GF D   V+EVGG+K+TVF Q+ E++++A+IILRAST NVL DLERA+DDGVNTVK  C+DGRF+ G GA EIE+AR+I    + + GLDQYA++KFAEALE+VPR LAE++GQ+ T  +++LYA H  GK   GVD E     GV +      V+D L  K +ALRL  DAA+TVLRVDQIIM+K AGGPKP
Sbjct:    1 MAKSMGFNPAAGLSGLLKEGHKHFEGVDEAVAKNIDAVKQLADISRTSLGPNGMRKLVINHLDKIFVTSDTATIVQELEVVHPAAKMVVMAAKMQQTEYGDATNLVVSIAGELLMQAAGLLRMGLHASEIVTGYKKAYEKALEILNTLELHTIRDLRNQAELEKIIRPVVGAKQYGYEDVLAKLIAEACLNVFPNKPKAPKVNVDNIRVTKIMGGNVFDSRVVKGMVVQRDTEGSVKKAESAKVAVFGCGIEVSSTEAKSTVLIKTADELMNYNKGEEQRLDEAIRAISESGATVVIAGGSISEMALHFLEKYNLMSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDHVAVQEVGGKKITVFRQDEEDAKMATIILRASTDNVLNDLERAIDDGVNTVKAACKDGRFVAGGGATEIEVARQIEAFGNTTPGLDQYAIKKFAEALEIVPRMLAENAGQQGTQVISSLYAAHGAGKPNAGVDVECESETGVVENMLAANVVDHLETKKAALRLGADAAITVLRVDQIIMAKAAGGPKP 542          
BLAST of EWM22676.1 vs. NCBI_GenBank
Match: gi|695383767|ref|XP_009517808.1| (hypothetical protein PHYSODRAFT_553521 [Phytophthora sojae] >gi|348690719|gb|EGZ30533.1| hypothetical protein PHYSODRAFT_553521 [Phytophthora sojae])

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 327/542 (60.33%), Postives = 421/542 (77.68%), Query Frame = 0
Query:    1 MSRSLNYNQAAGLQGMLKEGSKSLEGVDEAVIRNIEAAKQLAGICSSSMGPNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVMAAMMQEKECGDATNFTVSFAGELLKKAEDLLHKGLHTSEIVAGYRVAFDKAMEILPTLTTHTVQDPRDAQQVIRVLESVLGTKYFGYEGTLAPYVAQACQAVMPPAPRKPSLNVDSVRVCKLMGGTIGDSLVMKGVVVSRNTEGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEATDTVTALYAEHEKGKLGVGVDAEGAGVG-------DKGVLDSLAVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKP 535
            MS+S+  N A GL  +LK+G K  EGVDEAV +NI+A KQLA I  SS+GPNG+ KLV+NHLE+I VTSD ATI+KELEV HPAA+M+VMAA MQE + GD T   V+ AGELL +A  LL  GLH SEIV GY+ A DK  EIL  L +  V++PRD + + + +++ L +K +GYE  LA  VA+AC  VMP AP+KPS+NVD++RV K+MGG + DS V++G+V+ RNTEG +K+ALKAKVAVFGCGIE SSTE K TVLI++A+EL+NYNKGEEK +E+ +++I++SG  V+V+GGSISEMA+HFLE+Y LM +KIQSKWELRRLC AVNA ALVRLGAPTP+E GF D   V+E+GG+KVTVF+QE E++++++I+LRAST NVL D+ERA+DDGVN VK +C+DGRF+ GAG+ EIEL+R+I    +A+ GLDQYA++KF +A+EVVPR LAE+SGQ AT+ +++LYA H  G +  GVD +            DKG+ D L  K SA+RL  DAA+TVLRVDQIIM+K AGGPKP
Sbjct:    1 MSKSMGLNVAGGLSSLLKDGHKHFEGVDEAVAKNIDAVKQLAAITRSSLGPNGMNKLVINHLERIFVTSDTATIVKELEVIHPAARMVVMAAKMQENDFGDGTCLVVALAGELLMEAASLLRMGLHASEIVTGYQKAHDKCQEILQKLQSVQVKNPRDQEDLQKAIKTSLASKQYGYEDLLAKLVAEACLNVMPAAPKKPSINVDNIRVAKIMGGNLHDSSVIRGMVIQRNTEGNVKKALKAKVAVFGCGIEISSTEAKSTVLIKDADELMNYNKGEEKHLEEAVRAISESGAMVVVSGGSISEMAMHFLEKYNLMALKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFQQEQEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKSFGEATPGLDQYAIKKFGDAIEVVPRILAENSGQMATEVISSLYAAHAAGNVSAGVDVDNEQESHVIPDALDKGIWDHLQTKMSAIRLGSDAAITVLRVDQIIMAKAAGGPKP 542          
The following BLAST results are available for this feature:
BLAST of EWM22676.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103241|gb|EWM22676.1|0.000e+0100.00chaperonin containing tcp1 theta subunit [Nannochl... [more]
gi|1214706842|gb|OWZ18326.1|0.000e+060.89T-complex protein 1, theta subunit [Phytophthora m... [more]
gi|566011528|gb|ETI34439.1|0.000e+060.89T-complex protein 1, theta subunit [Phytophthora p... [more]
gi|301119353|ref|XP_002907404.1|0.000e+060.70T-complex protein 1 subunit theta [Phytophthora in... [more]
gi|675176161|ref|XP_008896965.1|0.000e+060.89T-complex protein 1, theta subunit [Phytophthora p... [more]
gi|1173948658|gb|OQR96764.1|0.000e+061.54T-complex protein 1 subunit theta [Achlya hypogyna... [more]
gi|1173961268|gb|OQS07315.1|0.000e+061.62T-complex protein 1 subunit theta, partial [Thraus... [more]
gi|953501746|emb|CEG37195.1|0.000e+060.52t-complex protein theta subunit [Plasmopara halste... [more]
gi|673027488|ref|XP_008867705.1|0.000e+061.07T-complex protein 1, theta subunit [Aphanomyces in... [more]
gi|695383767|ref|XP_009517808.1|0.000e+060.33hypothetical protein PHYSODRAFT_553521 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8056rna8056Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications