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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100375g1.1527.mrna |
| Orig protein id | gnl|cribi|Naga_100375g1.1527 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002475.1 | supercontig | CM002475.1:34758..36527 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7871 ID=rna7871|Name=rna7871|organism=Nannochloropsis gaditana|type=mRNA|length=945bp
TCCCTCAGGTGATGGACGACCTGGACAGGCATGCCTGGGTCATGGGCGGG
GCCTCGGAGCGCTTCCGACGTGAGAGCCGAGAGCGACGGGTGGTTTTGCA
CGCCCGCGCATCCTGTGTCATCAAAATCGATCCTCTCGCCCCTTACAAGC
CCTCTCACGTGGAATTTGTCGGCCCGGAGGCCGTCATCGGTGCATGGACT
CGACGCCTGTACGCTGGCATCGGGGACTGGGATACGGCGAGAATGCCTCG
ACAGAACTTGGAAGCCATCCTCGGATTCCCCTTCCCTGCCCCTCCCACCC
ACTCGGATGGAGGAGGAAAGGGAGAGGGGTGGGAGGCGGCCTATGTCGAG
GAGTGCTGCATTTGCTATGCCTATCGACTGGGAGATGGATCCTCCAAGGA
GAGGGGAGATATCCCCACCGTTACCTGCGAGAACGAGCGCTGCCGCCGGC
TCTACCACTCTGTCTGCCTTCGCCAGTGGCTTCAGACGCTCCCCGACGTG
AAGATGATTCGCGGGGGCTTGACCAGTCGGACTACGTTGCTGGGCTCCTG
CCCTTTCTGCATTGAACCCATCTCCCTCGAGGTGGACGCCGTCGGTTTCG
TCTGAAGGCGGTCAGGAGGGCGGCTGCCACCTGGCCTTGATCGGGGACGT
GTCCTTGCGCGGGGGGGTGTCGCACTCTCCCAGTGCTCGGATTGAGCGAT
GCCTGCCAGCACCGGCTCGGTTCAGGGACGCAAGACGAGGCGGAGGGAAT
GGGCGCGGGCCCGGTGCCCAGACGACGCAAGCATCCAGACAAACGTGGGA
GAGAAGAAATTAACCCCAAAAAAATGACGGAGATATTGCCAGCGAGTTTA
GACTTTGCAGATTTTTGAGTCGACACTTAATTTACCGCTTGCCTTCTTAT
TTCTCTTGGGGCGACACACCTACTCCTTGCTTCCTCCTCATCCCC back to topprotein sequence of rna7871 >rna7871-protein ID=rna7871-protein|Name=rna7871|organism=Nannochloropsis gaditana|type=polypeptide|length=222bp
MIFPIVLPASNVTFPVAVPPRLLEEHLVSRADSLHALGSQSLQSLRPGQL
LLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLT
LSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEA
LTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSK
KIVCVVERRILRQSPKTEAFLL back to topmRNA from alignment at CM002475.1:34758..36527+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7871 ID=rna7871|Name=rna7871|organism=Nannochloropsis gaditana|type=mRNA|length=1770bp|location=Sequence derived from alignment at CM002475.1:34758..36527+ (Nannochloropsis gaditana)
ATGATCTTCcccatcgtcctccctgcctccaacgTCACCTTTCCTGTGGC
CGTCCCGCCTCGGCTCCTGGAAGAGCACTTGGTCTCACGAGCAGAcaggt
agagggagggacggcgggaggggagagagggagggagggaggaagggggg
cttCGGAAAACGCAGGGCGTGCAGGCGGGCGTGAGCATCCGtgatccctt
ccctcttggccgtcattctccctcctgacACGAgcgttccctctctccca
caccctcccccctttttaCAGTTTGCACGCCCTCGGCTCCCAGTCCTTGc
agtccctccgcccaggtcagctcctcctccactctctCGCAcgacccctc
tccccggcgCAGGTgcgagggggatgggaaggagggaaggagggagggaa
ggagggagggaaggagggagggaaggagggaaaggagaagattgGCAGGG
GTACAGGGGAGGAATTCTTGTCCTGTCGTGCGCAGGCACGCGGCGACCGT
GTCGTCCGTTCACGAGAGGGATGTCGCCCGTTTATGAGACGTTGTCGAAA
GCATTGGGCGCCCAGTGGCGGCATTGTTTGTGGGGTTGGTTGCTTCGACT
GCTCACGCCTCACGggctcctgcctcctgctcacTCCTGTCTTTCcaccg
cgccctccctcccctttctccctctgcaGAGCATgcagctttcctccttg
ggcCGTCTTACCCACGAGCGCCATTTCAATACCCGGAAGTTCAAGCGCGA
CGAGATGTACATCccaggtaggggaggagggaggaggaatgatgagagag
cgagggagggaagagtggCGAGGAGCCTGCGggtggcaaggaagggagat
acCTTGCAAGGAAGGTGATGACGAGCAGCGAGGGTGCCGGAAAAAATGGC
TGGATATGTCCGGCGGGCACGCCTTCCGCCGTCGCGCGGCTGTCGCAATC
AAATTCGTGCATCGTCTCGCGGCATTGTTCCTCATGCTAGGACCCTtcgg
ccccctccttgccctccacaGGCGGTCTGGTGCTGGGCTTGACGCTCTCA
GCCTCAGCCCGAGACCTGCACGAGGTCCTGCACGAGGAGGTGATCGAATG
CGCCTTCATCAACCACCTGCACCCCTGgggtgagagagagggggggagga
caacGAGAGGAAAGAGCCTGGGGGGGAGTTGTGTGCCATGCCTTCGGTCA
CTGCTTGGAGGCGACGGTCCTTGGCCGACTAGTCAATGAACTGATCTCAG
CGGGTGATTCGTGGCTCGGAGCGCAGCAGACGAGGAGATCGATGACTGAC
CACGGAGTCCTAACGTCTTGGAGGGTCCTCTGtaccccccctttttccca
ttCTTCCCCCCTACTCGCTTTCCCTCTGCGTTCTTTGCGCTCCAGACATc
gtgtcttccttctcctacATCAAGGAGATGGATGAGAACATCACAGGCGA
TTTGGAAGGTGAGCCACGTGCTCCCCTTGCACTCGTGCTCTGTCATGACC
TCATCACTCTACTGCACCCTGTCTCGTTTTcatccctgcccctttctAGC
GCTGACGCTCCGCACGATTGGCGTCAAGAATGTAGACGTGCACCTGGATC
TGCTCGACCaggcctttcccctcgcccttttcaCTACCCCGTCCCTGCGG
ACGAAGCACATGGAGGCCCTCTGCAAGGCGCACATCCCAGAGCTGAGCAA
GAAGATTGTGTGCGTGGTGGAAAGACGGATACTGCGACAAAGCCCCAAGA
CCGAGGCGTTCTTGTTgtag back to topCoding sequence (CDS) from alignment at CM002475.1:34758..36527+ >rna7871 ID=rna7871|Name=rna7871|organism=Nannochloropsis gaditana|type=CDS|length=4014bp|location=Sequence derived from alignment at CM002475.1:34758..36527+ (Nannochloropsis gaditana)
ATGATCTTCcccatcgtcctccctgcctccaacgTCACCTTTCCTGTGGC
CGTCCCGCCTCGGCTCCTGGAAGAGCACTTGGTCTCACGAGCAGAcagTT
TGCACGCCCTCGGCTCCCAGTCCTTGcagtccctccgcccaggtcagctc
ctcctccactctctCGCAcgacccctctccccggcgCAGAGCATgcagct
ttcctccttgggcCGTCTTACCCACGAGCGCCATTTCAATACCCGGAAGT
TCAAGCGCGACGAGATGTACATCccagGCGGTCTGGTGCTGGGCTTGACG
CTCTCAGCCTCAGCCCGAGACCTGCACGAGGTCCTGCACGAGGAGGTGAT
CGAATGCGCCTTCATCAACCACCTGCACCCCTGggACATcgtgtcttcct
tctcctacATCAAGGAGATGGATGAGAACATCACAGGCGATTTGGAAGCG
CTGACGCTCCGCACGATTGGCGTCAAGAATGTAGACGTGCACCTGGATCT
GCTCGACCaggcctttcccctcgcccttttcaCTACCCCGTCCCTGCGGA
CGAAGCACATGGAGGCCCTCTGCAAGGCGCACATCCCAGAGCTGAGCAAG
AAGATTGTGTGCGTGGTGGAAAGACGGATACTGCGACAAAGCCCCAAGAC
CGAGGCGTTCTTGTTgtagATGATCTTCcccatcgtcctccctgcctcca
acgTCACCTTTCCTGTGGCCGTCCCGCCTCGGCTCCTGGAAGAGCACTTG
GTCTCACGAGCAGAcagTTTGCACGCCCTCGGCTCCCAGTCCTTGcagtc
cctccgcccaggtcagctcctcctccactctctCGCAcgacccctctccc
cggcgCAGAGCATgcagctttcctccttgggcCGTCTTACCCACGAGCGC
CATTTCAATACCCGGAAGTTCAAGCGCGACGAGATGTACATCccagGCGG
TCTGGTGCTGGGCTTGACGCTCTCAGCCTCAGCCCGAGACCTGCACGAGG
TCCTGCACGAGGAGGTGATCGAATGCGCCTTCATCAACCACCTGCACCCC
TGggACATcgtgtcttccttctcctacATCAAGGAGATGGATGAGAACAT
CACAGGCGATTTGGAAGCGCTGACGCTCCGCACGATTGGCGTCAAGAATG
TAGACGTGCACCTGGATCTGCTCGACCaggcctttcccctcgcccttttc
aCTACCCCGTCCCTGCGGACGAAGCACATGGAGGCCCTCTGCAAGGCGCA
CATCCCAGAGCTGAGCAAGAAGATTGTGTGCGTGGTGGAAAGACGGATAC
TGCGACAAAGCCCCAAGACCGAGGCGTTCTTGTTgtagATGATCTTCccc
atcgtcctccctgcctccaacgTCACCTTTCCTGTGGCCGTCCCGCCTCG
GCTCCTGGAAGAGCACTTGGTCTCACGAGCAGAcagTTTGCACGCCCTCG
GCTCCCAGTCCTTGcagtccctccgcccaggtcagctcctcctccactct
ctCGCAcgacccctctccccggcgCAGAGCATgcagctttcctccttggg
cCGTCTTACCCACGAGCGCCATTTCAATACCCGGAAGTTCAAGCGCGACG
AGATGTACATCccagGCGGTCTGGTGCTGGGCTTGACGCTCTCAGCCTCA
GCCCGAGACCTGCACGAGGTCCTGCACGAGGAGGTGATCGAATGCGCCTT
CATCAACCACCTGCACCCCTGggACATcgtgtcttccttctcctacATCA
AGGAGATGGATGAGAACATCACAGGCGATTTGGAAGCGCTGACGCTCCGC
ACGATTGGCGTCAAGAATGTAGACGTGCACCTGGATCTGCTCGACCaggc
ctttcccctcgcccttttcaCTACCCCGTCCCTGCGGACGAAGCACATGG
AGGCCCTCTGCAAGGCGCACATCCCAGAGCTGAGCAAGAAGATTGTGTGC
GTGGTGGAAAGACGGATACTGCGACAAAGCCCCAAGACCGAGGCGTTCTT
GTTgtagATGATCTTCcccatcgtcctccctgcctccaacgTCACCTTTC
CTGTGGCCGTCCCGCCTCGGCTCCTGGAAGAGCACTTGGTCTCACGAGCA
GAcagTTTGCACGCCCTCGGCTCCCAGTCCTTGcagtccctccgcccagg
tcagctcctcctccactctctCGCAcgacccctctccccggcgCAGAGCA
TgcagctttcctccttgggcCGTCTTACCCACGAGCGCCATTTCAATACC
CGGAAGTTCAAGCGCGACGAGATGTACATCccagGCGGTCTGGTGCTGGG
CTTGACGCTCTCAGCCTCAGCCCGAGACCTGCACGAGGTCCTGCACGAGG
AGGTGATCGAATGCGCCTTCATCAACCACCTGCACCCCTGggACATcgtg
tcttccttctcctacATCAAGGAGATGGATGAGAACATCACAGGCGATTT
GGAAGCGCTGACGCTCCGCACGATTGGCGTCAAGAATGTAGACGTGCACC
TGGATCTGCTCGACCaggcctttcccctcgcccttttcaCTACCCCGTCC
CTGCGGACGAAGCACATGGAGGCCCTCTGCAAGGCGCACATCCCAGAGCT
GAGCAAGAAGATTGTGTGCGTGGTGGAAAGACGGATACTGCGACAAAGCC
CCAAGACCGAGGCGTTCTTGTTgtagATGATCTTCcccatcgtcctccct
gcctccaacgTCACCTTTCCTGTGGCCGTCCCGCCTCGGCTCCTGGAAGA
GCACTTGGTCTCACGAGCAGAcagTTTGCACGCCCTCGGCTCCCAGTCCT
TGcagtccctccgcccaggtcagctcctcctccactctctCGCAcgaccc
ctctccccggcgCAGAGCATgcagctttcctccttgggcCGTCTTACCCA
CGAGCGCCATTTCAATACCCGGAAGTTCAAGCGCGACGAGATGTACATCc
cagGCGGTCTGGTGCTGGGCTTGACGCTCTCAGCCTCAGCCCGAGACCTG
CACGAGGTCCTGCACGAGGAGGTGATCGAATGCGCCTTCATCAACCACCT
GCACCCCTGggACATcgtgtcttccttctcctacATCAAGGAGATGGATG
AGAACATCACAGGCGATTTGGAAGCGCTGACGCTCCGCACGATTGGCGTC
AAGAATGTAGACGTGCACCTGGATCTGCTCGACCaggcctttcccctcgc
ccttttcaCTACCCCGTCCCTGCGGACGAAGCACATGGAGGCCCTCTGCA
AGGCGCACATCCCAGAGCTGAGCAAGAAGATTGTGTGCGTGGTGGAAAGA
CGGATACTGCGACAAAGCCCCAAGACCGAGGCGTTCTTGTTgtagATGAT
CTTCcccatcgtcctccctgcctccaacgTCACCTTTCCTGTGGCCGTCC
CGCCTCGGCTCCTGGAAGAGCACTTGGTCTCACGAGCAGAcagTTTGCAC
GCCCTCGGCTCCCAGTCCTTGcagtccctccgcccaggtcagctcctcct
ccactctctCGCAcgacccctctccccggcgCAGAGCATgcagctttcct
ccttgggcCGTCTTACCCACGAGCGCCATTTCAATACCCGGAAGTTCAAG
CGCGACGAGATGTACATCccagGCGGTCTGGTGCTGGGCTTGACGCTCTC
AGCCTCAGCCCGAGACCTGCACGAGGTCCTGCACGAGGAGGTGATCGAAT
GCGCCTTCATCAACCACCTGCACCCCTGggACATcgtgtcttccttctcc
tacATCAAGGAGATGGATGAGAACATCACAGGCGATTTGGAAGCGCTGAC
GCTCCGCACGATTGGCGTCAAGAATGTAGACGTGCACCTGGATCTGCTCG
ACCaggcctttcccctcgcccttttcaCTACCCCGTCCCTGCGGACGAAG
CACATGGAGGCCCTCTGCAAGGCGCACATCCCAGAGCTGAGCAAGAAGAT
TGTGTGCGTGGTGGAAAGACGGATACTGCGACAAAGCCCCAAGACCGAGG
CGTTCTTGTTgtag back to top
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