EWM22823.1, cds7849 (CDS) Nannochloropsis gaditana

Overview
NameEWM22823.1
Unique Namecds7849
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002475.1:34758..34855 +
Alignment locationCM002475.1:35029..35119 +
Alignment locationCM002475.1:35437..35524 +
Alignment locationCM002475.1:35779..35886 +
Alignment locationCM002475.1:36153..36215 +
Alignment locationCM002475.1:36307..36527 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22823.1
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100375g1.1527.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002475.1supercontigCM002475.1:34758..34855 +
CM002475.1supercontigCM002475.1:35029..35119 +
CM002475.1supercontigCM002475.1:35437..35524 +
CM002475.1supercontigCM002475.1:35779..35886 +
CM002475.1supercontigCM002475.1:36153..36215 +
CM002475.1supercontigCM002475.1:36307..36527 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|585103455|gb|EWM22823.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 449.514 bits (1155), Expect = 9.708e-160
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query:    1 MIFPIVLPASNVTFPVAVPPRLLEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSPKTEAFLL 222
            MIFPIVLPASNVTFPVAVPPRLLEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSPKTEAFLL
Sbjct:    1 MIFPIVLPASNVTFPVAVPPRLLEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSPKTEAFLL 222          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|298706365|emb|CBJ29374.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 193.356 bits (490), Expect = 2.300e-56
Identity = 102/228 (44.74%), Postives = 144/228 (63.16%), Query Frame = 0
Query:    2 IFPIVLPAS---NVTFPVAVPP----RLLEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSPKTEAFLL 222
            +FP   P S   +   P   PP      L +H+V +++ L  LG Q+L+    GQL++H+ ARP+S  QSM+LSSL RLTH RHF+T K   D + IP GL++ L  S SARDLHEVLHEE++   FIN   P D ++S +Y++ ++++  G LE L +RTIG+K++ +  DL     PL LF    LRTK +E +C+   PEL  KIV + ER ++RQ+PKT+ FLL
Sbjct:  177 MFPFFAPPSPRDSTATPEEQPPPKPADRLRDHVVKQSEKLAELGGQTLRRFSAGQLIIHTPARPISRTQSMELSSLARLTHSRHFDTVKHGEDGLAIPAGLIVALATSLSARDLHEVLHEELMYANFINPFRPGDAMTSITYVQRVEQHPNGVLEKLRVRTIGIKDI-LTDDLTGMPLPLELFVDEGLRTKGVEQICRESCPELCGKIVVLAEREVIRQAPKTDVFLL 403          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|260798716|ref|XP_002594346.1| (hypothetical protein BRAFLDRAFT_117692 [Branchiostoma floridae] >gi|229279579|gb|EEN50357.1| hypothetical protein BRAFLDRAFT_117692 [Branchiostoma floridae])

HSP 1 Score: 120.553 bits (301), Expect = 3.297e-29
Identity = 68/196 (34.69%), Postives = 114/196 (58.16%), Query Frame = 0
Query:   23 LEEHLVSRADSLHALGSQSLQSL--RPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITG-DLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSP 215
            L  H+V  A  L     Q ++SL   P QL +H + +   P +SM LS+L R+T+  HFNT+KF  + + +PG  VL  T+   A +  ++L+EEV+E + +N ++  D++ S S+I  + + I   DLE +T+RT+G+KN+DV  +L+++  P+ LF+  ++R    E +C    P L ++I   V  + LR  P
Sbjct:  122 LRSHIVQNAAVLR--DGQMMESLPLMPTQLYVHRVVKSFRPGESMGLSNLIRVTNAHHFNTKKFSSEAIVVPGPFVLAATVHNVADEFGDILYEEVVETSNVNPVNQKDMIGSVSFIHSVQQLIENPDLEEVTVRTLGIKNMDVD-ELMEREVPVRLFSGTNVRGADYEKICMEEFPLLYRRIAAQVLWKFLRLRP 314          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|1200674318|gb|OUX69354.1| (hypothetical protein CBD00_05850 [Rhodospirillaceae bacterium TMED140])

HSP 1 Score: 123.635 bits (309), Expect = 6.372e-29
Identity = 67/198 (33.84%), Postives = 114/198 (57.58%), Query Frame = 0
Query:   16 VAVPPRLLEEHLVSRADSLHALGSQSLQ-SLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILR 212
             A P R L E ++    +       S+   L  GQL+LH   RP+  ++++ LS+L R TH  HF+ +++ R+++ + GG V  +  +A  R+L +++HE+VI+ + I  + P D + + S+I+ +   I+  LE + L+T G++NVDV  +L  +A PLALF     +    E +C+   P+LS +I   +ERRILR
Sbjct:  511 AAAPDRSLRERMIEAVGAGRPANPASIAPDLTAGQLILHPPVRPIGWSENLGLSTLLRNTHPLHFDAQRYGREDIVVCGGFVQAMAHAAGERELRQIVHEQVIQASHIXTVAPEDRIGAISFIRXVTP-ISDRLEEVELKTFGLRNVDVXRELGGRALPLALFEAEGTKPSVYEDICQRDCPDLSGRIALQIERRILR 707          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|1200302405|gb|OUU24063.1| (hypothetical protein CBC13_04145 [Planctomycetia bacterium TMED53])

HSP 1 Score: 116.701 bits (291), Expect = 1.686e-27
Identity = 64/186 (34.41%), Postives = 103/186 (55.38%), Query Frame = 0
Query:   27 LVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILR 212
            L+   D +    S  ++ L+ G+L++H + RPL  ++++ LS+  R TH  H+++  + RD + + GG V  L  +   R++ +VL E +I  + IN + P D + S S I E+ ENI+  LE +TL+T+G+KNVDV  +L     P  L  +  L+   +E  C    PEL+ KI     R ILR
Sbjct:  178 LIDHYDGIKEFPSAQIEPLKAGRLIIHPMVRPLGWSENLALSTTYRNTHPIHWDSTSYGRDGIVVCGGFVQSLVFATGDREIRQVLDETLIHSSHINTVTPEDGIGSISKILEI-ENISDRLERVTLKTLGLKNVDVSKELSSLEIPNKLLNSDPLKPSEIELTCSDQCPELAGKIAMQATRSILR 362          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|1200529003|gb|OUW41824.1| (hypothetical protein CBD41_09945 [bacterium TMED181])

HSP 1 Score: 112.079 bits (279), Expect = 1.005e-25
Identity = 58/165 (35.15%), Postives = 99/165 (60.00%), Query Frame = 0
Query:   48 GQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILR 212
            G  +LH + RPL  ++++ LS+L R TH  H++++ + RD + + GG V  +  +A  R+L +VL E +I  + IN + P D + + S I E+ ENI+  LE +T++T+G+KNVD+  +L +   P  L +  +L+   +E +C  + PEL+ +I     R ILR
Sbjct:  199 GDFILHPMVRPLGWSENLALSTLYRNTHPIHWDSQHYGRDGIVVCGGFVQSMVFAACDRELRQVLDETLISSSHINTVAPEDGIGAISKIVEV-ENISETLERITVKTLGLKNVDIAHELPEVDIPDQLLSAETLKPSEIEKICAGNCPELAGRIAMQATRSILR 362          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|498214246|ref|WP_010528402.1| (hypothetical protein [Thermophagus xiamenensis] >gi|1097580285|emb|SFE20822.1| Acyl dehydratase [Thermophagus xiamenensis])

HSP 1 Score: 111.309 bits (277), Expect = 1.699e-25
Identity = 60/215 (27.91%), Postives = 122/215 (56.74%), Query Frame = 0
Query:    2 IFPIVLPASNVTFPVAVPPR--LLEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAF-INHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQ 213
            +FP + P   ++    +P +  L +E +++RA ++       +  L  G L+LH   RP+  ++++  S+  + TH  H+N +++K  E+ IPGG+V+ +    +AR+  ++L ++ I+ AF +N ++  D + +FS+++ +++ + G  E + +RT G++N+D   +L D AFP +LF T   R   +  +     P L  K+ CV++  +LR+
Sbjct:  153 LFPEINPRKTISSEQKIPYQNNLFKEKILARARNISM--DNVMIRLEAGDLILHPYVRPIGKSENLFWSTYLKNTHPSHYNYQRYKPFEIIIPGGMVIAMVSGIAAREFRQILMQQ-IDVAFHVNPVYAEDRIGAFSFVRGVNQLMPG-FEEVFIRTFGIRNMDTEPELSDVAFPKSLFDTRVERPSQVRQIIDEKCPVLRDKVCCVIDWSVLRK 363          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|1126197675|ref|XP_019632029.1| (PREDICTED: uncharacterized protein LOC109475706 isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 111.309 bits (277), Expect = 2.032e-25
Identity = 60/181 (33.15%), Postives = 107/181 (59.12%), Query Frame = 0
Query:   38 GSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSY---IKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSP 215
            G+ S   L P QL +H + +  +P ++  L++L R T++ H N +KF  +++   G LV   T+   A D  ++L++EV++ + +N  +  D++ S SY   I+++ EN   DLE +T+RT+G+KN+DV  +LL++  P+ LF+   ++T   E +C+   P L ++IV  V  + LR  P
Sbjct:  169 GNASSPPLVPNQLYVHRMVKVFTPTEAKGLATLIRATNQHHLNVKKFNTEDLVAAGPLVEAATVHNVADDFGDILYQEVVKSSNVNRTNQEDMIGSVSYIHSIQQLAEN--PDLEEVTVRTLGIKNLDVE-ELLEREVPVRLFSGTRMKTSDYEEICREDFPLLYRRIVTQVLWKFLRLRP 346          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|1126197677|ref|XP_019632030.1| (PREDICTED: uncharacterized protein LOC109475706 isoform X3 [Branchiostoma belcheri])

HSP 1 Score: 110.538 bits (275), Expect = 3.122e-25
Identity = 60/181 (33.15%), Postives = 107/181 (59.12%), Query Frame = 0
Query:   38 GSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSY---IKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSP 215
            G+ S   L P QL +H + +  +P ++  L++L R T++ H N +KF  +++   G LV   T+   A D  ++L++EV++ + +N  +  D++ S SY   I+++ EN   DLE +T+RT+G+KN+DV  +LL++  P+ LF+   ++T   E +C+   P L ++IV  V  + LR  P
Sbjct:  151 GNASSPPLVPNQLYVHRMVKVFTPTEAKGLATLIRATNQHHLNVKKFNTEDLVAAGPLVEAATVHNVADDFGDILYQEVVKSSNVNRTNQEDMIGSVSYIHSIQQLAEN--PDLEEVTVRTLGIKNLDVE-ELLEREVPVRLFSGTRMKTSDYEEICREDFPLLYRRIVTQVLWKFLRLRP 328          
BLAST of EWM22823.1 vs. NCBI_GenBank
Match: gi|1126208474|ref|XP_019637900.1| (PREDICTED: uncharacterized protein LOC109480178 [Branchiostoma belcheri])

HSP 1 Score: 112.464 bits (280), Expect = 5.048e-25
Identity = 61/181 (33.70%), Postives = 108/181 (59.67%), Query Frame = 0
Query:   38 GSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSY---IKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSP 215
            G+ S  +L P QL +H + +  SP ++  L++L R T++ H N +KF  +++   G LV   T+     D  ++L++EV+E + +N  +  D++ S SY   I+++ EN   +LE +T+RT+G+KN+DV  +LL++  P+ LF+  S++T   E +C+   P L ++IV  V  + LR  P
Sbjct:  526 GNTSSPTLVPNQLYIHRMVKVFSPTEAKGLATLIRATNQHHHNVKKFNTEDLLTAGPLVEAATVHNVTDDFGDILYQEVVESSNVNRTNEEDMIGSVSYIHSIQQLAEN--PNLEEVTVRTLGIKNLDVE-ELLEREVPVRLFSGTSMKTSDYEEICREDFPLLYRRIVTQVLWKFLRIRP 703          
The following BLAST results are available for this feature:
BLAST of EWM22823.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103455|gb|EWM22823.1|9.708e-160100.00conserved unknown protein [Nannochloropsis gaditan... [more]
gi|298706365|emb|CBJ29374.1|2.300e-5644.74conserved unknown protein [Ectocarpus siliculosus][more]
gi|260798716|ref|XP_002594346.1|3.297e-2934.69hypothetical protein BRAFLDRAFT_117692 [Branchiost... [more]
gi|1200674318|gb|OUX69354.1|6.372e-2933.84hypothetical protein CBD00_05850 [Rhodospirillacea... [more]
gi|1200302405|gb|OUU24063.1|1.686e-2734.41hypothetical protein CBC13_04145 [Planctomycetia b... [more]
gi|1200529003|gb|OUW41824.1|1.005e-2535.15hypothetical protein CBD41_09945 [bacterium TMED18... [more]
gi|498214246|ref|WP_010528402.1|1.699e-2527.91hypothetical protein [Thermophagus xiamenensis] >g... [more]
gi|1126197675|ref|XP_019632029.1|2.032e-2533.15PREDICTED: uncharacterized protein LOC109475706 is... [more]
gi|1126197677|ref|XP_019632030.1|3.122e-2533.15PREDICTED: uncharacterized protein LOC109475706 is... [more]
gi|1126208474|ref|XP_019637900.1|5.048e-2533.70PREDICTED: uncharacterized protein LOC109480178 [B... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7871rna7871Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications