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Properties
| Property Name | Value |
|---|
| Product | zinc finger protein |
| Orig transcript id | gnl|cribi|Naga_100491g1.7064.mrna |
| Orig protein id | gnl|cribi|Naga_100491g1.7064 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002475.1 | supercontig | CM002475.1:32819..34282 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7870 ID=rna7870|Name=rna7870|organism=Nannochloropsis gaditana|type=mRNA|length=1521bp
TGATGTTATCATCTCTTCCTTAGTTTTGGCCCTGCTAATATCATGCCCGT
CCCCTTCTCACCCGCCGCCCCAATCGCAGGAAGCCAGAGCACCGCACGCT
CTAGCCCACCTTTATTTATTGCCATGGCCTACCGTCGTTCTGGGCCTTCG
GGGACTACGCCTGTACAGGCAGAGAATAAAAAGAGGCTTGAGGATCTCCT
AAAGCGGCCTGAGAACCAAATCTGCGCGGATTGTCCTGAACGAGGTATGT
TCACGTATCTCTTTTGCTCCTGTCTAGGCCCTTATTTCAAGTGCGTTTCC
TGCGGAAGATGGCCTCTTTGATAAGCCTGTTATGCGAAGCTTTCACAAAA
AATATCTTTTGCTCACGGTGTGCGATGGAGCTCGTCCAGCGCCCTGACAA
GCTGCATTTCTTGTTTTCGCTCCAAAGTTGTTGCCCACCCCAAGCTTATT
TCCTTCTCCTTACTTGATTCCACGAACTCAGGCCCGCGCTGGGCCTCCGC
CACCCTCGGTACCTTCATTTGTATTAAATGCAGTGGCATTCACCGGAATC
TGGGCGTGCATATCTCTTTCGTCCGCTCCGTTAATCTGGACGAATGGAAG
ACCGAGCACGTCGAGCAAATGGAAAAGTGGGGCAATGGCCGCGCCCGTGC
ATATTTTGAGGCCCAGGTGCCCCCGGGATACGCCCGGCCCTCGGACTGGT
CGAACGTGCATCAGATGACCAAATGGATCAAGGACAAGTACGAGTACAAG
CGCTTCCTGCCTAAGGACGGGTCCGTGCCAGGGCGAGAGCCTGCCCCTTC
CCGCAGTGGGAAGCCCAAGCTCACTACTGACCAGCTTCTCTCCATGTTCA
TGTCGCCGGCGGCCTCTCAGCCGCAGCACAAGCCGGGCCCCTACGGGCAG
CCCCTCGCCCAGCCTGTGAATCCGACCCTCGCGCAACAACCTTCAGCCTA
CGGTACCGTCCCATCCCACCCTCAGCACCATCTTCACCACTACCAGCAGC
ACCACCATCCTCACCACTACCACCAGCAGCACCAGCAGCAGCAGCAGGTC
ATGCAACCACAATATCAACAGCAGAGGCCACAGCATTACCAACAGCAATC
GCAACAACAGTATCAGCAGCATCAGCATCAGCAACACTACCAACAGGAGC
GCCCGTCGCACCCGTTCGGGCATACAGGGTCTGCCGGCGCCCCTACCCCC
AACCCCCAACCTCATCCGCAGCCAGGACGATGGGGCCTGGAAACCATGAG
TACCCCTGTGACTGCGATACAGAACTCCCAGCCTCAGCACGGTCAAGGTG
GGTTTGGAGGCACGGCCTCGGGGATGCCCGGCTCCATGCTCCCTCCTTCG
CGGCCTGCCTCCCTCCCTCCGACGGGCCCGGGTCACGCCCTCCCTTCCTT
CCCGCCGAGCTTCCCCCAGCAGCAGCCGCCCTGGCCCGCACCCTCATCGC
AACAGCAGCAGCCGGTCTGGCCGCCACAGCCGCAGCAAGGAGGAACAGGC
GCCAATGGCTTTGCGTTTTAA back to topprotein sequence of rna7870 >rna7870-protein ID=rna7870-protein|Name=rna7870|organism=Nannochloropsis gaditana|type=polypeptide|length=197bp
MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHV
EFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDG
GGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHS
VCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEVDAVGFV back to topmRNA from alignment at CM002475.1:32819..34282- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7870 ID=rna7870|Name=rna7870|organism=Nannochloropsis gaditana|type=mRNA|length=1464bp|location=Sequence derived from alignment at CM002475.1:32819..34282- (Nannochloropsis gaditana)
TCCCTCAGGTGATGGACGACCTGGACAGGCATGCCTGGGTCATGGGCGGG
GCCTCGGAGCGCTTCCGACGTGAGAGCCGAGAGCGACGGGTGGTTTTGCA
CGCCCGCGCATCCTGTGTCATCAAAATCGATCCTCTCGCCCCTTACAAGG
TAGGGCACTGCGCCTTTCCTTTCCTCCTCCCTTCCCTCCTTCCTCCCCTT
CCCCCTCCCACTCGTCCTCCTCCCCCCCTCCCCTAACTCTCTCTCCATCC
CCCTCCCTGTTTCCCTCCCTCCATCCATCCTCCCCTCCCCTCAGCCCTCT
CACGTGGAATTTGTCGGCCCGGAGGCCGTCATCGGTGCATGGACTCGACG
CCTGTACGCTGGCATCGGGGACTGGTGAGCCTCACTCGCTTCCCCTCCTC
CCTTGCTTGGCTCCTGCTTTTCTGTCTCGCCGCCTCTCTCTCTCTGTGAG
TGAGCTGACGCTTTTCCATGTCTCCTCCTCGCTTTTTCTCCCCCTCCTTG
GGCCCCGCCCTGTCGCGCAGGGATACGGCGAGAATGCCTCGACAGAACTT
GGAAGCCATCCTCGGATTCCCCTTCCCTGCCCCTCCCACCCACTCGGATG
GAGGAGGAAAGGGAGAGGGGTGGGAGGCGGCCTATGTCGAGGAGTGCTGC
ATTTGCTATGCCTATCGACTGGGAGATGGATCCTCCAAGGAGAGGGGAGG
TACGACGTGGGAGAGGAAGGGTGCGAAGAGAAAGCAAGGGGAGGAGGTCG
AGGGCAGGGTGGTACCCTCAAGTCTTCCTCGCCCTCTCCCTCTCCCCCGT
CCCCATTTTTTCTCTTAGATATCCCCACCGTTACCTGCGAGAACGAGCGC
TGCCGCCGGCTCTACCACTCTGTCTGCCTTCGCCAGTGGCTTCAGACGCT
CCCCGACGTGAAGATGATTCGTAAGCACCGAGGAGAGAGCGATCCACCAG
GCGCTTGAAACCTTCTCTTAACTCTCACCCAATCAACCTCCCCCTTCCCC
CCACCTTGTCCTCCCTCCATCCCTCCCAGGCGGGGGCTTGACCAGTCGGA
CTACGTTGCTGGGCTCCTGCCCTTTCTGCATTGAACCCATCTCCCTCGAG
GTGGACGCCGTCGGTTTCGTCTGAAGGCGGTCAGGAGGGCGGCTGCCACC
TGGCCTTGATCGGGGACGTGTCCTTGCGCGGGGGGGTGTCGCACTCTCCC
AGTGCTCGGATTGAGCGATGCCTGCCAGCACCGGCTCGGTTCAGGGACGC
AAGACGAGGCGGAGGGAATGGGCGCGGGCCCGGTGCCCAGACGACGCAAG
CATCCAGACAAACGTGGGAGAGAAGAAATTAACCCCAAAAAAATGACGGA
GATATTGCCAGCGAGTTTAGACTTTGCAGATTTTTGAGTCGACACTTAAT
TTACCGCTTGCCTTCTTATTTCTCTTGGGGCGACACACCTACTCCTTGCT
TCCTCCTCATCCCC back to topCoding sequence (CDS) from alignment at CM002475.1:32819..34282- >rna7870 ID=rna7870|Name=rna7870|organism=Nannochloropsis gaditana|type=CDS|length=2970bp|location=Sequence derived from alignment at CM002475.1:32819..34282- (Nannochloropsis gaditana)
GCGGGGGCTTGACCAGTCGGACTACGTTGCTGGGCTCCTGCCCTTTCTGC
ATTGAACCCATCTCCCTCGAGGTGGACGCCGTCGGTTTCGTCTGAATATC
CCCACCGTTACCTGCGAGAACGAGCGCTGCCGCCGGCTCTACCACTCTGT
CTGCCTTCGCCAGTGGCTTCAGACGCTCCCCGACGTGAAGATGATTCGGA
TACGGCGAGAATGCCTCGACAGAACTTGGAAGCCATCCTCGGATTCCCCT
TCCCTGCCCCTCCCACCCACTCGGATGGAGGAGGAAAGGGAGAGGGGTGG
GAGGCGGCCTATGTCGAGGAGTGCTGCATTTGCTATGCCTATCGACTGGG
AGATGGATCCTCCAAGGAGAGGGGAGCCCTCTCACGTGGAATTTGTCGGC
CCGGAGGCCGTCATCGGTGCATGGACTCGACGCCTGTACGCTGGCATCGG
GGACTGATGGACGACCTGGACAGGCATGCCTGGGTCATGGGCGGGGCCTC
GGAGCGCTTCCGACGTGAGAGCCGAGAGCGACGGGTGGTTTTGCACGCCC
GCGCATCCTGTGTCATCAAAATCGATCCTCTCGCCCCTTACAAGGCGGGG
GCTTGACCAGTCGGACTACGTTGCTGGGCTCCTGCCCTTTCTGCATTGAA
CCCATCTCCCTCGAGGTGGACGCCGTCGGTTTCGTCTGAATATCCCCACC
GTTACCTGCGAGAACGAGCGCTGCCGCCGGCTCTACCACTCTGTCTGCCT
TCGCCAGTGGCTTCAGACGCTCCCCGACGTGAAGATGATTCGGATACGGC
GAGAATGCCTCGACAGAACTTGGAAGCCATCCTCGGATTCCCCTTCCCTG
CCCCTCCCACCCACTCGGATGGAGGAGGAAAGGGAGAGGGGTGGGAGGCG
GCCTATGTCGAGGAGTGCTGCATTTGCTATGCCTATCGACTGGGAGATGG
ATCCTCCAAGGAGAGGGGAGCCCTCTCACGTGGAATTTGTCGGCCCGGAG
GCCGTCATCGGTGCATGGACTCGACGCCTGTACGCTGGCATCGGGGACTG
ATGGACGACCTGGACAGGCATGCCTGGGTCATGGGCGGGGCCTCGGAGCG
CTTCCGACGTGAGAGCCGAGAGCGACGGGTGGTTTTGCACGCCCGCGCAT
CCTGTGTCATCAAAATCGATCCTCTCGCCCCTTACAAGGCGGGGGCTTGA
CCAGTCGGACTACGTTGCTGGGCTCCTGCCCTTTCTGCATTGAACCCATC
TCCCTCGAGGTGGACGCCGTCGGTTTCGTCTGAATATCCCCACCGTTACC
TGCGAGAACGAGCGCTGCCGCCGGCTCTACCACTCTGTCTGCCTTCGCCA
GTGGCTTCAGACGCTCCCCGACGTGAAGATGATTCGGATACGGCGAGAAT
GCCTCGACAGAACTTGGAAGCCATCCTCGGATTCCCCTTCCCTGCCCCTC
CCACCCACTCGGATGGAGGAGGAAAGGGAGAGGGGTGGGAGGCGGCCTAT
GTCGAGGAGTGCTGCATTTGCTATGCCTATCGACTGGGAGATGGATCCTC
CAAGGAGAGGGGAGCCCTCTCACGTGGAATTTGTCGGCCCGGAGGCCGTC
ATCGGTGCATGGACTCGACGCCTGTACGCTGGCATCGGGGACTGATGGAC
GACCTGGACAGGCATGCCTGGGTCATGGGCGGGGCCTCGGAGCGCTTCCG
ACGTGAGAGCCGAGAGCGACGGGTGGTTTTGCACGCCCGCGCATCCTGTG
TCATCAAAATCGATCCTCTCGCCCCTTACAAGGCGGGGGCTTGACCAGTC
GGACTACGTTGCTGGGCTCCTGCCCTTTCTGCATTGAACCCATCTCCCTC
GAGGTGGACGCCGTCGGTTTCGTCTGAATATCCCCACCGTTACCTGCGAG
AACGAGCGCTGCCGCCGGCTCTACCACTCTGTCTGCCTTCGCCAGTGGCT
TCAGACGCTCCCCGACGTGAAGATGATTCGGATACGGCGAGAATGCCTCG
ACAGAACTTGGAAGCCATCCTCGGATTCCCCTTCCCTGCCCCTCCCACCC
ACTCGGATGGAGGAGGAAAGGGAGAGGGGTGGGAGGCGGCCTATGTCGAG
GAGTGCTGCATTTGCTATGCCTATCGACTGGGAGATGGATCCTCCAAGGA
GAGGGGAGCCCTCTCACGTGGAATTTGTCGGCCCGGAGGCCGTCATCGGT
GCATGGACTCGACGCCTGTACGCTGGCATCGGGGACTGATGGACGACCTG
GACAGGCATGCCTGGGTCATGGGCGGGGCCTCGGAGCGCTTCCGACGTGA
GAGCCGAGAGCGACGGGTGGTTTTGCACGCCCGCGCATCCTGTGTCATCA
AAATCGATCCTCTCGCCCCTTACAAGGCGGGGGCTTGACCAGTCGGACTA
CGTTGCTGGGCTCCTGCCCTTTCTGCATTGAACCCATCTCCCTCGAGGTG
GACGCCGTCGGTTTCGTCTGAATATCCCCACCGTTACCTGCGAGAACGAG
CGCTGCCGCCGGCTCTACCACTCTGTCTGCCTTCGCCAGTGGCTTCAGAC
GCTCCCCGACGTGAAGATGATTCGGATACGGCGAGAATGCCTCGACAGAA
CTTGGAAGCCATCCTCGGATTCCCCTTCCCTGCCCCTCCCACCCACTCGG
ATGGAGGAGGAAAGGGAGAGGGGTGGGAGGCGGCCTATGTCGAGGAGTGC
TGCATTTGCTATGCCTATCGACTGGGAGATGGATCCTCCAAGGAGAGGGG
AGCCCTCTCACGTGGAATTTGTCGGCCCGGAGGCCGTCATCGGTGCATGG
ACTCGACGCCTGTACGCTGGCATCGGGGACTGATGGACGACCTGGACAGG
CATGCCTGGGTCATGGGCGGGGCCTCGGAGCGCTTCCGACGTGAGAGCCG
AGAGCGACGGGTGGTTTTGCACGCCCGCGCATCCTGTGTCATCAAAATCG
ATCCTCTCGCCCCTTACAAG back to top
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