EWM22827.1, cds7848 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|585103460|gb|EWM22827.1| (zinc finger protein [Nannochloropsis gaditana]) HSP 1 Score: 405.986 bits (1042), Expect = 2.292e-143 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEVDAVGFV 197 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEVDAVGFV Sbjct: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEVDAVGFV 197
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|857978373|emb|CEO95787.1| (hypothetical protein PBRA_004500, partial [Plasmodiophora brassicae]) HSP 1 Score: 116.701 bits (291), Expect = 9.982e-27 Identity = 65/188 (34.57%), Postives = 98/188 (52.13%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPIS 188 ++D+D H WV+ + R SR RR+ + S ++ I+P +P++ F+G E+V+ RL + WDT+RMPR NLE IL FP P G + + EC ICY+ DG +R CE+ RC R +H+ CL +WLQ++P + S +TL G+CP+C P+S Sbjct: 554 LEDIDAHCWVI--EPDHATRASRSRRIAIGQHCSILVDIEPESPFRVCDCRFLGAESVVNPLRERLNRDLDRWDTSRMPRVNLERILSISFPGKP--------APGAQDEFQLECGICYSVS-RDGVVADR------VCEDARCGRPFHNQCLFEWLQSIPSSRQ------SFSTLFGACPYCSAPLS 718
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|545374931|ref|XP_005651697.1| (hypothetical protein COCSUDRAFT_64092 [Coccomyxa subellipsoidea C-169] >gi|384253679|gb|EIE27153.1| hypothetical protein COCSUDRAFT_64092 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 113.235 bits (282), Expect = 2.074e-26 Identity = 71/196 (36.22%), Postives = 98/196 (50.00%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAP-YKPSHVEFVGPEAVIGAWTRRLYAGIGD-WDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRL------GDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPIS 188 +DDLDR AWV+ E+ RR+ L S ++++DP P +P + F+G EA RL A WD R+PR+NLE +L P T + G+ CCICYAYRL G GS+ G++P +C N RC R +H CLR+WL LP + S T+ G CP+C +PI+ Sbjct: 207 LDDLDREAWVL--EPEKPTPADAHRRIALGGHCSLLLELDPARPRARPPDLRFLGSEAAAAPMRTRLRAADAPPWDPGRLPRENLERLLQMKLPTRSTSAQDDISGD---------CCICYAYRLPPAQPPGAGSAT-LGEVPDQSCGNPRCARPFHGRCLREWLLALPTSR------RSFNTVFGECPYCSQPIT 384
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|831788456|ref|XP_012758752.1| (hypothetical protein SAMD00019534_013310 [Acytostelium subglobosum LB1] >gi|735859384|dbj|GAM18156.1| hypothetical protein SAMD00019534_013310 [Acytostelium subglobosum LB1]) HSP 1 Score: 108.612 bits (270), Expect = 1.250e-24 Identity = 62/193 (32.12%), Postives = 98/193 (50.78%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDW---DTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLE 190 M+++DR WV+ E +R RR+ L S I ++PL+P F+GPE + ++L + + W D + + N +A+L FP K + ++ EC ICY++RLG G IP + C N RC++ +H CL +WL++LP+V S TL GSCP+C +PIS++ Sbjct: 207 MEEIDRMTWVL--EPEHPQRSDTARRIALGNNCSLSIDVNPLSPLTFPDCRFLGPERAVAPLRQKLNSNLSKWRPLDPSLL--GNFQALLEMEFPV---------KQVSNISDFIIECSICYSHRLGGD-----GTIPDIICNNARCQKQFHHSCLFEWLRSLPNVNH------SFDTLFGSCPYCSDPISVK 375
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|260831222|ref|XP_002610558.1| (hypothetical protein BRAFLDRAFT_57071 [Branchiostoma floridae] >gi|229295925|gb|EEN66568.1| hypothetical protein BRAFLDRAFT_57071 [Branchiostoma floridae]) HSP 1 Score: 107.457 bits (267), Expect = 2.081e-24 Identity = 63/193 (32.64%), Postives = 96/193 (49.74%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEVDA 193 M++LD+ WV+ E+ + RR+ L AS I +DP P F+G + VI + L A + WD + NL+ +LG FP+P E + A C ICYAYRLG+ +IP C++ RC R +H+ CL +WL+ LP +M S + G CP+C +PI++++ A Sbjct: 188 MEELDKSTWVL--EPEKPSCKDTVRRIALGNNASVQITVDPAHPRMLPECRFLGADHVINPIKQSLNANLHCWDPRQTLLPNLQNVLGVDFPSP-----ANSSKEDFNMA----CSICYAYRLGE-------EIPDRACDDPRCSRPFHATCLIEWLRALPSTRM------SFNVIFGECPYCSKPITVKMTA 356
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|552846036|ref|XP_005851512.1| (hypothetical protein CHLNCDRAFT_19195, partial [Chlorella variabilis] >gi|307111175|gb|EFN59410.1| hypothetical protein CHLNCDRAFT_19195, partial [Chlorella variabilis]) HSP 1 Score: 102.834 bits (255), Expect = 8.574e-24 Identity = 63/197 (31.98%), Postives = 93/197 (47.21%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYK-PSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSK-----ERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEV 191 +DDLD AWV+ + R RR+ L S + +DP P+ P F+G +A + +RL+ G W R+ R+NLEA+LG P G E A +C ICYAYRL + E G+ P + C+N C + +H CL +WL + + S TL G+CP+C PI+++ Sbjct: 24 LDDLDAQAWVIEPTAAP--RSVVYRRIALGHHVSLALTLDPAQPWALPLDCRFMGSDAAVAPLRQRLHDNRGCWQAGRLLRENLEAVLGVALP-----QRQGADAEDASA----DCAICYAYRLPPAEGQLPAGGEEGESPDINCDNAACGKPFHRRCLVEWLNSDTSTRQ------SFNTLFGACPYCSAPITVKA 203
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|1126226428|ref|XP_019647647.1| (PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Branchiostoma belcheri]) HSP 1 Score: 103.605 bits (257), Expect = 8.041e-23 Identity = 60/191 (31.41%), Postives = 91/191 (47.64%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEV 191 M++LDR WV+ +R RR+ L AS I +DP P F+G + VI + L + WD + NL+ +L FP+P E + A C ICYAYRLG+ +IP C++ RC R +H+ CL +WL+ LP +M S + G CP+C + I++++ Sbjct: 201 MEELDRSTWVLEPEKPSYR--DTVRRIALGNNASVQITVDPAHPRMLPECRFLGADHVINPMKQSLNTNLHYWDPGQTLLANLQNVLEVEFPSP-----ANTSKEDFNLA----CSICYAYRLGE-------EIPDKACDDPRCSRPFHATCLIEWLRALPSTRM------SFNVIFGECPYCSKSITVKM 367
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|961073620|ref|XP_014786459.1| (PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Octopus bimaculoides] >gi|918335768|gb|KOF97770.1| hypothetical protein OCBIM_22028540mg [Octopus bimaculoides]) HSP 1 Score: 103.605 bits (257), Expect = 8.240e-23 Identity = 59/191 (30.89%), Postives = 93/191 (48.69%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEV 191 M+++D+ WV+ E+ + RR+ L +S + DP P F+G E+V+ + L A + WD QNLE +L FP+P K E ++ EC ICY+YRLG ++P CE+ +C + YH CL +WL+TLP + S + G CP C++P+S+ + Sbjct: 197 MEEIDQKTWVL--EPEKPTYSATFRRIALSPNSSLQVIFDPDEPQNFVQCHFIGAESVVDPLKKNLNANLQKWDMGINVLQNLENLLEIDFPSP-----AFTKKE----EFLGECGICYSYRLG-------MELPCKVCESAQCGQPYHQSCLYEWLKTLPSSRY------SYNMVFGECPICLKPLSVTI 363
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|595440432|gb|EXX53335.1| (hypothetical protein RirG_244900 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 102.834 bits (255), Expect = 1.361e-22 Identity = 61/192 (31.77%), Postives = 85/192 (44.27%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTTLLGSCPFCIEPISLEVD 192 +DD+D + WV+ ++ +R RR+ L S IK+D P K G E+ I + +WD RQNLE IL FP+P SD + C ICYAYRL D IP TC N +C + +H VCL +WL+ +P L G CP+C + I L ++ Sbjct: 196 LDDIDANTWVL--EPDKPKRSDMSRRIALGNHCSLFIKLDEFNPKKLCDYTLFGAESFITPLRTNIAKNFNNWDLLLSIRQNLEKILEINFPSPEESSD-----------FNVACGICYAYRLDDV-------IPDQTCSNAKCGQPFHQVCLYEWLRAIPSTTQTFNRLR------GDCPYCNDTILLIIN 361
BLAST of EWM22827.1 vs. NCBI_GenBank
Match: gi|585641755|ref|XP_006881087.1| (PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Elephantulus edwardii]) HSP 1 Score: 103.219 bits (256), Expect = 1.662e-22 Identity = 63/194 (32.47%), Postives = 94/194 (48.45%), Query Frame = 0 Query: 1 MDDLDRHAWVMGGASERFRRESRERRVVLHARASCVIKIDPLAPYKPSHVEFVGPEAVIGAWTRRLYAGIGDWDTARMPRQNLEAILGFPFPAPPTHSDGGGKGEGWEAAYVEECCICYAYRLGDGSSKERGDIPTVTCENERCRRLYHSVCLRQWLQTLPDVKMIRGGLTSRTT---LLGSCPFCIEPISLEV 191 MD++D WV+ E R + RR+ L AS I +DP P P F+G + VI +L I WD P QNL+ +L FPA + ++ + +C ICYA++L G IP C+N +C + +H +CL +WL RG LTSR + + G CP+C +PI+L++ Sbjct: 262 MDEIDEKTWVL--EPENPTRSATARRIALGNNASVNIDVDPRHPTMPPECYFLGADHVIKPLGIKLSKNIHLWDPENTPLQNLKDVLEIDFPA---------RSILEKSDFTMDCGICYAFQLD-------GAIPDQVCDNPQCGQPFHQICLYEWL---------RGLLTSRQSFNIIFGECPYCSKPITLKM 428 The following BLAST results are available for this feature:
BLAST of EWM22827.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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