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Properties
| Property Name | Value |
|---|
| Product | stromal membrane-associated gtpase-activating protein |
| Orig transcript id | gnl|cribi|Naga_100491g2.7065.mrna |
| Orig protein id | gnl|cribi|Naga_100491g2.7065 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002475.1 | supercontig | CM002475.1:30376..32768 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7869 ID=rna7869|Name=rna7869|organism=Nannochloropsis gaditana|type=mRNA|length=1222bp
AGCGGGGACAGACCGCCGTACACCTGCACAAATCCACTGCTCATTCCATT
CGACTAGGTGACTCGTCCTGAAAACGTAGACGTGGGCCGCAACGTTCGTA
AAGACGCGGTGAGTGACCGACTTTTGCCCGCCCGGGGTCTTCTCTTGCTT
GGCGCCAGAAGCCAGCAAGCGAGAGCAGGCGCACACGTACACTTTACAAG
GGTTCGATAGAGTCCTCATGTACAAAAATGTTATTCCTCCGGGCGGGAGT
GCGAGCACAAGCGGAAGCGTGAGACAAGGCACGATAACAAACAAGATAAA
AGCCATCGTGTATGACCTTGATGGTACATTGCTAGACACCGAAAGCTTGT
CTACTGAGGCCATTCAAGCCGTCGTCGGGGCGTACGGCAAGACTTTCACT
TGGGACATCAAAAAGAAGATTCTTGGCATGCGCGGTGAGGAATGGGGCCG
CGTAGTTGTCGATGATCTAGGTCTTAGTGATCAAATAGAGCCCATGATGC
TCGTAAAGCAATGGGAAAGGGAACTTGAGGTTGTAACCCCGACAGTACAG
TTGTTACCAGGCGCGAGAGAGATAATTCAGTTCTTCGACTCCAAAGGTCT
TCCTCAAGCGATAGCCACGTCCTCCTCCGCCTTACTAGTAGCGCACAAGC
GCACACATCACGAAGATCACGTGTTTGGAAGAATGCGAACCATAGTGACC
GGAGACGACCCCAAGGTTGTCCGCGGTAAGCCTGCCCCAGACATCTACCT
GGAGGCGGCTCAACGGTTGGGAGTGGCCCCGGAGGAGTGCTTAGTCTTCG
AGGATGCGCTGACTGGAGTGTTGTCGGGAAAGGCTGCCGGTATGTTTGTG
GTAGCAATTCCAGATCCGCGCCTTGACGCGGCCTGCTTCCAGGCGCATGC
ACATCAGGTCTTGAAAAGTTTAGATACTTTTGATCCCCGAAGCTGGGGAT
GGGTGGAGGACAATATCACGTTCTCCACGATTCAATAGTAGCGTGAAACA
TTCTGTCAAGAGGCACTGTGATTTCTCTGGAAATTTTTAAATCATGCCAA
GCAGAGACAAACAGGAGGGAAGAATAATAGAGTTGATTTTTTGTCTCTTC
TCATTGCGAATACAAAGCTGAAAGTCGGGACGACGGCAAGCAACTGTCTA
CCAAAGCACAATTAGGAGTATTCTGGTTGCGAGTAACTTTCATTTGGCTG
ATTCTTTTTGCAAAACCTTTCG back to topprotein sequence of rna7869 >rna7869-protein ID=rna7869-protein|Name=rna7869|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MEKWGNGRARAYFEAQVPPGYARPSDWSNVHQMTKWIKDKYEYKRFLPKD
GSVPGREPAPSRSGKPKLTTDQLLSMFMSPAASQPQHKPGPYGQPLAQPV
NPTLAQQPSAYGTVPSHPQHHLHHYQQHHHPHHYHQQHQQQQQVMQPQYQ
QQRPQHYQQQSQQQYQQHQHQQHYQQERPSHPFGHTGSAGAPTPNPQPHP
QPGRWGLETMSTPVTAIQNSQPQHGQGGFGGTASGMPGSMLPPSRPASLP
PTGPGHALPSFPPSFPQQQPPWPAPSSQQQQPVWPPQPQQGGTGANGFAF back to topmRNA from alignment at CM002475.1:30376..32768+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7869 ID=rna7869|Name=rna7869|organism=Nannochloropsis gaditana|type=mRNA|length=2393bp|location=Sequence derived from alignment at CM002475.1:30376..32768+ (Nannochloropsis gaditana)
TGATGTTATCATCTCTTCCTTAGTTTTGGCCCTGCTAATATCATGCCCGT
CCCCTTCTCACCCGCCGCCCCAATCGCAGGAAGCCAGAGCACCGCACGCT
CTAGCCCACCTTTATTTATTGCCATGGCCTACCGTCGTTCTGGGCCTTCG
GGGACTACGCCTGTACAGGCAGAGAATAAAAAGAGGCTTGAGGATCTCCT
AAAGCGGCCTGAGAACCAAATCTGCGCGGATTGTCCTGAACGAGGTATGT
TCACGTATCTCTTTTGCTCCTGTCTAGGCCCTTATTTCAAGTGCGTTTCC
TGCGGAAGATGGCCTCTTTGATAAGCCTGTTATGCGAAGCTTTCACAAAA
AATATCTTTTGCTCACGGTGTGCGATGGAGCTCGTCCAGCGCCCTGACAA
GCTGCATTTCTTGTTTTCGCTCCAAAGTTGTTGCCCACCCCAAGCttatt
tccttctccttacTTGATTCCACGAACTCAGGCCCGCGCtgggcctccgc
caccctcGGTACCTTCATTTGTATTAAATGCAGTGGCATTCACCGGAATC
TGGGCGTGCATATCTCTTTCGTCCGCTCCGTTAATCTGGACGAATGGAAG
ACCGAGCACGTCGAGGTAaggggagcgagaggggccggaggtATCCGCAG
GCGTCAAGCCAGCCTCCACGAAGAGCGTGGGCAGGCCTATCAGGTCCACA
TCCTCATATGTTGTTACATATATTTTTATACGTACAGCAAATGGAAAAGT
GGGGCAATGGCCGCGCCCGTGCATATTTTGAGGCCCAGGTGCCCCCGGGA
TACGCCCGGCCCTCGGACTGGTCGAACGTGCATCAGATGACCAAATGGAT
CAAGGTAGAACGAAGCGGGATGCGGAGGAATGCGGCTTCCATGAGGAAAC
GTGGGGGTATTTTTTCCCGGTACTTCTTGCTACCGAGCTGTGTTGGCACC
TGAtcacgctcccctccctctccctccctctcctccttcattctTTTGGG
ACCCGTTCTGCATGGGCTTTCAGGACAAGTACGAGTACAAGCGCTTCCTG
CCTAAGGACGGGTCCGTGCCAGGGCGAGagcctgccccttcccggtGCGT
ATGCCAGGccgcggggagagggaggcaggtggaATGGGCAGGGGCGGTCC
CCGCGATGGATCGACCTAGTCtcacccttcttcttcccctcaccctcctt
tccctctcttcagcgcctctcccaccagcAACggtccatctcccccttcc
gcgCCCCCCACCCGGGAACGCAAGCCGCGtgcccgtccttccccctcccc
ttcctccctccctgcctccgccccgccctcctcctccccctcccttccca
aaCCTGCCCCAGCCCCTGCGCCTGTAGTCGACCTTCTTGACTTCACAGAC
TCTGCACCAacgccgctccctccctcggtccctgcctcccttcctccgcc
ggcaccatCCCCCGTTGTCCCGGGGCCGCCGGCTCCcgccccttctccgc
cccctcctaCGGTGGAGATGACCAGCAGTGGGAAGCCCAAGCTCACTACT
GACCAGCTTCTCTCCATGTTCATGTCGCCGGCGGCCTCTCAGCCGCAGCA
CAAGCCGGGTAGGGCGGGAGAGTTCGACGCGGGATCGGTGAGGGGACTGC
ACGGCCCCCTCCCGACGCCAGCTTTGAGCTTTGGCTTGGTTTGTTGTGTC
CTtattctctctccttccctctcctttcctccccttccctccctccctcc
ctctgtagGCCCCTACGGGCAGCCCCTCGCCCAGCCTGTGAATCCGACCC
TCGCGCAACAACCTTCAGCCTACGGTACCGTCCCATCCCACCCTCAGCAC
CATCTTCACCACTACCAGCAGCACCACCATCCTCACCACTaccaccagca
gcaccagcagcagcagcaggtcaTGCAACCACAATATCAACAGCAGAGGC
CACAGCATTACCAACAGCAATCGCAACAACAGTATCAGCAGCATCAGCAT
CAGCAACACTACCAACAGGAGCGCCCGTCGCACCCGTTCGGGCATACAGG
GTCTGCCGGCGCCCCTACCCCCAACCCCCAACCTCATCCGCAGCCAGGAC
GATGGGGCCTGGAAACCATGAGTACCCCTGTGACTGCGATACAGAACTCC
CAGCCTCAGCACGGTCAAGGTGGGTTTGGAGGCACGGCCTCGGGGATGCC
CGGctccatgctccctccttcgcggcctgcctccctccctccgacggGCC
CGggtcacgccctcccttccttcccgccgaGCTTCccccagcagcagccg
ccctggcccgcaCCCTCAtcgcaacagcagcagccggTCTGGCCGCCACA
GccgcagcaaggaggaacaggCGCCAATGGCTTTGCGTtttaa back to topCoding sequence (CDS) from alignment at CM002475.1:30376..32768+ >rna7869 ID=rna7869|Name=rna7869|organism=Nannochloropsis gaditana|type=CDS|length=3612bp|location=Sequence derived from alignment at CM002475.1:30376..32768+ (Nannochloropsis gaditana)
ATGGAAAAGTGGGGCAATGGCCGCGCCCGTGCATATTTTGAGGCCCAGGT
GCCCCCGGGATACGCCCGGCCCTCGGACTGGTCGAACGTGCATCAGATGA
CCAAATGGATCAAGGACAAGTACGAGTACAAGCGCTTCCTGCCTAAGGAC
GGGTCCGTGCCAGGGCGAGagcctgccccttcccgCAGTGGGAAGCCCAA
GCTCACTACTGACCAGCTTCTCTCCATGTTCATGTCGCCGGCGGCCTCTC
AGCCGCAGCACAAGCCGGGCCCCTACGGGCAGCCCCTCGCCCAGCCTGTG
AATCCGACCCTCGCGCAACAACCTTCAGCCTACGGTACCGTCCCATCCCA
CCCTCAGCACCATCTTCACCACTACCAGCAGCACCACCATCCTCACCACT
accaccagcagcaccagcagcagcagcaggtcaTGCAACCACAATATCAA
CAGCAGAGGCCACAGCATTACCAACAGCAATCGCAACAACAGTATCAGCA
GCATCAGCATCAGCAACACTACCAACAGGAGCGCCCGTCGCACCCGTTCG
GGCATACAGGGTCTGCCGGCGCCCCTACCCCCAACCCCCAACCTCATCCG
CAGCCAGGACGATGGGGCCTGGAAACCATGAGTACCCCTGTGACTGCGAT
ACAGAACTCCCAGCCTCAGCACGGTCAAGGTGGGTTTGGAGGCACGGCCT
CGGGGATGCCCGGctccatgctccctccttcgcggcctgcctccctccct
ccgacggGCCCGggtcacgccctcccttccttcccgccgaGCTTCcccca
gcagcagccgccctggcccgcaCCCTCAtcgcaacagcagcagccggTCT
GGCCGCCACAGccgcagcaaggaggaacaggCGCCAATGGCTTTGCGTtt
taaATGGAAAAGTGGGGCAATGGCCGCGCCCGTGCATATTTTGAGGCCCA
GGTGCCCCCGGGATACGCCCGGCCCTCGGACTGGTCGAACGTGCATCAGA
TGACCAAATGGATCAAGGACAAGTACGAGTACAAGCGCTTCCTGCCTAAG
GACGGGTCCGTGCCAGGGCGAGagcctgccccttcccgCAGTGGGAAGCC
CAAGCTCACTACTGACCAGCTTCTCTCCATGTTCATGTCGCCGGCGGCCT
CTCAGCCGCAGCACAAGCCGGGCCCCTACGGGCAGCCCCTCGCCCAGCCT
GTGAATCCGACCCTCGCGCAACAACCTTCAGCCTACGGTACCGTCCCATC
CCACCCTCAGCACCATCTTCACCACTACCAGCAGCACCACCATCCTCACC
ACTaccaccagcagcaccagcagcagcagcaggtcaTGCAACCACAATAT
CAACAGCAGAGGCCACAGCATTACCAACAGCAATCGCAACAACAGTATCA
GCAGCATCAGCATCAGCAACACTACCAACAGGAGCGCCCGTCGCACCCGT
TCGGGCATACAGGGTCTGCCGGCGCCCCTACCCCCAACCCCCAACCTCAT
CCGCAGCCAGGACGATGGGGCCTGGAAACCATGAGTACCCCTGTGACTGC
GATACAGAACTCCCAGCCTCAGCACGGTCAAGGTGGGTTTGGAGGCACGG
CCTCGGGGATGCCCGGctccatgctccctccttcgcggcctgcctccctc
cctccgacggGCCCGggtcacgccctcccttccttcccgccgaGCTTCcc
ccagcagcagccgccctggcccgcaCCCTCAtcgcaacagcagcagccgg
TCTGGCCGCCACAGccgcagcaaggaggaacaggCGCCAATGGCTTTGCG
TtttaaATGGAAAAGTGGGGCAATGGCCGCGCCCGTGCATATTTTGAGGC
CCAGGTGCCCCCGGGATACGCCCGGCCCTCGGACTGGTCGAACGTGCATC
AGATGACCAAATGGATCAAGGACAAGTACGAGTACAAGCGCTTCCTGCCT
AAGGACGGGTCCGTGCCAGGGCGAGagcctgccccttcccgCAGTGGGAA
GCCCAAGCTCACTACTGACCAGCTTCTCTCCATGTTCATGTCGCCGGCGG
CCTCTCAGCCGCAGCACAAGCCGGGCCCCTACGGGCAGCCCCTCGCCCAG
CCTGTGAATCCGACCCTCGCGCAACAACCTTCAGCCTACGGTACCGTCCC
ATCCCACCCTCAGCACCATCTTCACCACTACCAGCAGCACCACCATCCTC
ACCACTaccaccagcagcaccagcagcagcagcaggtcaTGCAACCACAA
TATCAACAGCAGAGGCCACAGCATTACCAACAGCAATCGCAACAACAGTA
TCAGCAGCATCAGCATCAGCAACACTACCAACAGGAGCGCCCGTCGCACC
CGTTCGGGCATACAGGGTCTGCCGGCGCCCCTACCCCCAACCCCCAACCT
CATCCGCAGCCAGGACGATGGGGCCTGGAAACCATGAGTACCCCTGTGAC
TGCGATACAGAACTCCCAGCCTCAGCACGGTCAAGGTGGGTTTGGAGGCA
CGGCCTCGGGGATGCCCGGctccatgctccctccttcgcggcctgcctcc
ctccctccgacggGCCCGggtcacgccctcccttccttcccgccgaGCTT
CccccagcagcagccgccctggcccgcaCCCTCAtcgcaacagcagcagc
cggTCTGGCCGCCACAGccgcagcaaggaggaacaggCGCCAATGGCTTT
GCGTtttaaATGGAAAAGTGGGGCAATGGCCGCGCCCGTGCATATTTTGA
GGCCCAGGTGCCCCCGGGATACGCCCGGCCCTCGGACTGGTCGAACGTGC
ATCAGATGACCAAATGGATCAAGGACAAGTACGAGTACAAGCGCTTCCTG
CCTAAGGACGGGTCCGTGCCAGGGCGAGagcctgccccttcccgCAGTGG
GAAGCCCAAGCTCACTACTGACCAGCTTCTCTCCATGTTCATGTCGCCGG
CGGCCTCTCAGCCGCAGCACAAGCCGGGCCCCTACGGGCAGCCCCTCGCC
CAGCCTGTGAATCCGACCCTCGCGCAACAACCTTCAGCCTACGGTACCGT
CCCATCCCACCCTCAGCACCATCTTCACCACTACCAGCAGCACCACCATC
CTCACCACTaccaccagcagcaccagcagcagcagcaggtcaTGCAACCA
CAATATCAACAGCAGAGGCCACAGCATTACCAACAGCAATCGCAACAACA
GTATCAGCAGCATCAGCATCAGCAACACTACCAACAGGAGCGCCCGTCGC
ACCCGTTCGGGCATACAGGGTCTGCCGGCGCCCCTACCCCCAACCCCCAA
CCTCATCCGCAGCCAGGACGATGGGGCCTGGAAACCATGAGTACCCCTGT
GACTGCGATACAGAACTCCCAGCCTCAGCACGGTCAAGGTGGGTTTGGAG
GCACGGCCTCGGGGATGCCCGGctccatgctccctccttcgcggcctgcc
tccctccctccgacggGCCCGggtcacgccctcccttccttcccgccgaG
CTTCccccagcagcagccgccctggcccgcaCCCTCAtcgcaacagcagc
agccggTCTGGCCGCCACAGccgcagcaaggaggaacaggCGCCAATGGC
TTTGCGTtttaa back to top
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