EWM22828.1, cds7847 (CDS) Nannochloropsis gaditana

Overview
NameEWM22828.1
Unique Namecds7847
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002475.1:31116..31229 +
Alignment locationCM002475.1:31399..31469 +
Alignment locationCM002475.1:31901..31983 +
Alignment locationCM002475.1:32134..32768 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22828.1
Productstromal membrane-associated gtpase-activating protein
Orig transcript idgnl|cribi|Naga_100491g2.7065.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002475.1supercontigCM002475.1:31116..31229 +
CM002475.1supercontigCM002475.1:31399..31469 +
CM002475.1supercontigCM002475.1:31901..31983 +
CM002475.1supercontigCM002475.1:32134..32768 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22828.1 vs. NCBI_GenBank
Match: gi|585103461|gb|EWM22828.1| (stromal membrane-associated gtpase-activating protein [Nannochloropsis gaditana])

HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 
Query:    1 MEKWGNGRARAYFEAQVPPGYARPSDWSNVHQMTKWIKDKYEYKRFLPKDGSVPGREPAPSRSGKPKLTTDQLLSMFMSPAASQPQHKPGPYGQPLAQPVNPTLAQQPSAYGTVPSHPQHHLHHYQQHHHPHHYHQQHQQQQQVMQPQYQQQRPQHYQQQSQQQYQQHQHQQHYQQERPSHPFGHTGSAGAPTPNPQPHPQPGRWGLETMSTPVTAIQNSQPQHGQGGFGGTASGMPGSMLPPSRPASLPPTGPGHALPSFPPSFPQQQPPWPAPSSQQQQPVWPPQPQQGGTGANGFAF 300
            MEKWGNGRARAYFEAQVPPGYARPSDWSNVHQMTKWIKDKYEYKRFLPKDGSVPGREPAPSRSGKPKLTTDQLLSMFMSPAASQPQHKPGPYGQPLAQPVNPTLAQQPSAYGTVPSHPQHHLHHYQQHHHPHHYHQQHQQQQQVMQPQYQQQRPQHYQQQSQQQYQQHQHQQHYQQERPSHPFGHTGSAGAPTPNPQPHPQPGRWGLETMSTPVTAIQNSQPQHGQGGFGGTASGMPGSMLPPSRPASLPPTGPGHALPSFPPSFPQQQPPWPAPSSQQQQPVWPPQPQQGGTGANGFAF
Sbjct:    1 MEKWGNGRARAYFEAQVPPGYARPSDWSNVHQMTKWIKDKYEYKRFLPKDGSVPGREPAPSRSGKPKLTTDQLLSMFMSPAASQPQHKPGPYGQPLAQPVNPTLAQQPSAYGTVPSHPQHHLHHYQQHHHPHHYHQQHQQQQQVMQPQYQQQRPQHYQQQSQQQYQQHQHQQHYQQERPSHPFGHTGSAGAPTPNPQPHPQPGRWGLETMSTPVTAIQNSQPQHGQGGFGGTASGMPGSMLPPSRPASLPPTGPGHALPSFPPSFPQQQPPWPAPSSQQQQPVWPPQPQQGGTGANGFAF 300
The following BLAST results are available for this feature:
BLAST of EWM22828.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103461|gb|EWM22828.1|0.000e+0100.00stromal membrane-associated gtpase-activating prot... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7869rna7869Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications