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Properties
| Property Name | Value |
|---|
| Product | Zn(2)-C6 fungal-type DNA-binding domain protein |
| Orig transcript id | gnl|cribi|Naga_101102g3.3609.mrna |
| Orig protein id | gnl|cribi|Naga_101102g3.3609 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:691493..693546 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6874 ID=rna6874|Name=rna6874|organism=Nannochloropsis gaditana|type=mRNA|length=258bp
ATGTCTTCAAAGCACGATAAAAAGAAGTCGAAGCACCAGGCCAGCAGTGG
GACGGGTGTGGATGCTTTATTGGATGCATTCTCCAATTCTAAGAACGCAT
CTATGGCTGCAAAAACGGCTGAGTGGGAGCAAAAAGGCGACGCAGGGGTA
GTTGGGGACGATGACCTGTCTGGCATCCCCGTCATTGTCCGCTACGGAAT
ATTGGGCCTGATTTGCCTCCTCTCCTTCGCCATTCGTCTCTTCGCCGTCG
TTCGGTAG back to topprotein sequence of rna6874 >rna6874-protein ID=rna6874-protein|Name=rna6874|organism=Nannochloropsis gaditana|type=polypeptide|length=452bp
PLPLPTPLPSPPSGTWSGSSVISSLSSSGASSHYSSIPPSSSFHPSPSSS
QSGGSQGSGGGGGGQGGRYLTTQPGRDDGALLCLNADVVKRPISATLREP
PPPFLSSPQASTVVAPGTLPPASLSFATPATLAAARSMLQGFLQGKYPLS
STCTSSTSSVASTGTAASRPIIVRRARRACAYCHTKKISCTCTRPCRRCQ
DLNLVCSDYVPRPRHLGRSKGSRSPPQPRVGRTGAGYGGYARQEGEREGG
REIGERPSPPLVMPAARGAALFPVPATATSSLQSYPTQSPWEVKPRGGHE
EGRRQPDHGRGGFPRGAAGSSLPGFQQAAAPFAPLPAPLFLPYSGYGQSR
VANESVPAPPSNLPTPVALRRQQEEVVKQMMWAEGREVGREVGREVEPAV
PSLAGLPSALQTGNSGEVGEGRNDMAGRDEERGWDAHVLGEYDINRFFED
NE back to topmRNA from alignment at CM002469.1:691493..693546- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6874 ID=rna6874|Name=rna6874|organism=Nannochloropsis gaditana|type=mRNA|length=2054bp|location=Sequence derived from alignment at CM002469.1:691493..693546- (Nannochloropsis gaditana)
CCCTCTCCCGTTACCCACCCCACTCCCATCTCCACCCAGCGGGACCTGGA
GCGGCTCCTCCGTCATCTCCTCCCTCTCGTCGTCGGGCGCCTCCTCCCAC
TACTCCTCCATTCCCCCGTCCTCCTCCTTCCATCCCTCCCCCTCCTCCAG
CCAGAGCGGAGGGTCCCAAGGCAGTGGTGGTGGAGGAGGAGGGCAGGGAG
GAAGGTACCTCACCACCCAGCCGGGCCGCGACGACGGGGCTCTCCTCTGC
TTGAACGCGGACGTGGTGAAGCGGCCCATATCGGCAACTCTGCGTGAGCC
TCCCCCTCCCTTCCTCTCCTCCCCTCAAGCCAGCACTGTCGTGGCTCCAG
GGACGCTCCCGCCTGCCTCCTTGTCCTTCGCCACGCCTGCGACGTTGGCC
GCAGCCCGTTCCATGTTGCAAGGCTTCTTGCAGGGGAAGTACCCGCTGTC
CTCCACCTGCACCTCTTCCACCTCCTCGGTCGCCTCCACCGGCACCGCGG
CGTCCCGCCCCATCATTGTCCGCCGCGCCCGCCGGGCCTGTGCTTACTGC
CACACGAAAAAAATATCCTGCACCTGCACCCGCCCCTGTCGGCGCTGCCA
GGACTTGAACCTGGTATGCTCGGACTACGTTCCCCGACCTCGGCACCTTG
GTCGGTCAAAGGGGAGCCGGAGCCCGCCCCAGCCACGAGTGGGCCGGACA
GGCGCAGGCTATGGAGGATACGCCAGGCAGGAAGGAGAACGGGAGGGAGG
TAGGGAAATAGGGGAGAGGCCCTCACCCCCTCTGGTCATGCCTGCGGCCA
GAGGGGCAGCGCTTTTCCCGGTCCCTGCCACTGCCACGTCCTCTCTACAG
TCCTACCCTACACAATCACCGTGGGAGGTAAAACCACGGGGAGGGCACGA
AGAAGGAAGGAGGCAACCGGACCACGGGCGCGGCGGCTTCCCCCGAGGAG
CAGCAGGCTCGTCGCTGCCTGGCTTCCAGCAGGCGGCAGCTCCATTTGCT
CCACTTCCCGCCCCACTTTTTTTGCCTTATTCGGGCTACGGCCAGTCGAG
GGTGGCGAACGAGAGCGTCCCTGCCCCTCCCAGTAATTTGCCCACCCCGG
TGGCTCTACGGCGGCAGCAAGAGGAGGTCGTAAAGCAGATGATGTGGGCG
GAAGGGCGGGAGGTAGGGAGGGAGGTAGGGAGGGAGGTAGAGCCGGCTGT
TCCTTCCCTTGCTGGTCTCCCGAGTGCCTTACAGACGGGCAACAGCGGGG
AGGTAGGTGAAGGAAGGAATGATATGGCGGGAAGAGATGAGGAGAGAGGG
TGGGATGCGCACGTGCTGGGGGAGTACGACATCAACCGTTTTTTCGAGGA
CAACGAGTAAGAAAAAATGGAAATGGAAAAGGAAAAGGGGAAAATGGAAG
GGAGGCGTTCCTGTTTGAGGATTCCTCAGGCCGGTTCGGGAAAAAGGAGG
GAAAGGGGGACAGCGAGGGCCAAGGCCACAAATGCAAGAAGACGCATGTC
ATTCATGATGACATCTTGAAGCGTCGTGAGAACATGGACCGCTGGGGGAG
GCGCCGCGACGGACGTGGCAGGTTCGAGGAAGGCAGCTTCCATCGATACG
CGGGGAGGATAGCGAGCAAGGCGTAGGAACGCTTCAAATGTCAAGAGAAA
TTACATCCTTTTGTGTACTTTTATTGAGCTATAAAAAACTTGATAGCATC
GAATGTAAAGCACCGGGGGAAATAGGCGCGAAAATTTCAGGTGTCGAGAT
ATATCCGAAGTCTCGGTATTTTTGATGTAAGGAGTATCCATATAGTATAT
TCTTATCAAGCAGATATCAATTAAGAATTTTGGGGTTAAAAATTTCATGA
GGAGTGCAGGAGGTCGCGTTGAAAGCGAAGACAGAAAAGCCTAGGATACT
CTTGAGAGAAGACAAGGAAAATGGGATCATGAGTAAAGAAGAAATCAGCG
AAAGTGAGAAAAATAGCACAAGCGATGACAACCGGATAATGTCAAAGCAA
TTGATATGCTTGATAAGGCGTGATTCTTTTATCTTCTCTAAATCAGAAAG
TACC back to topCoding sequence (CDS) from alignment at CM002469.1:691493..693546- >rna6874 ID=rna6874|Name=rna6874|organism=Nannochloropsis gaditana|type=CDS|length=1359bp|location=Sequence derived from alignment at CM002469.1:691493..693546- (Nannochloropsis gaditana)
CCTCTCCCGTTACCCACCCCACTCCCATCTCCACCCAGCGGGACCTGGAG
CGGCTCCTCCGTCATCTCCTCCCTCTCGTCGTCGGGCGCCTCCTCCCACT
ACTCCTCCATTCCCCCGTCCTCCTCCTTCCATCCCTCCCCCTCCTCCAGC
CAGAGCGGAGGGTCCCAAGGCAGTGGTGGTGGAGGAGGAGGGCAGGGAGG
AAGGTACCTCACCACCCAGCCGGGCCGCGACGACGGGGCTCTCCTCTGCT
TGAACGCGGACGTGGTGAAGCGGCCCATATCGGCAACTCTGCGTGAGCCT
CCCCCTCCCTTCCTCTCCTCCCCTCAAGCCAGCACTGTCGTGGCTCCAGG
GACGCTCCCGCCTGCCTCCTTGTCCTTCGCCACGCCTGCGACGTTGGCCG
CAGCCCGTTCCATGTTGCAAGGCTTCTTGCAGGGGAAGTACCCGCTGTCC
TCCACCTGCACCTCTTCCACCTCCTCGGTCGCCTCCACCGGCACCGCGGC
GTCCCGCCCCATCATTGTCCGCCGCGCCCGCCGGGCCTGTGCTTACTGCC
ACACGAAAAAAATATCCTGCACCTGCACCCGCCCCTGTCGGCGCTGCCAG
GACTTGAACCTGGTATGCTCGGACTACGTTCCCCGACCTCGGCACCTTGG
TCGGTCAAAGGGGAGCCGGAGCCCGCCCCAGCCACGAGTGGGCCGGACAG
GCGCAGGCTATGGAGGATACGCCAGGCAGGAAGGAGAACGGGAGGGAGGT
AGGGAAATAGGGGAGAGGCCCTCACCCCCTCTGGTCATGCCTGCGGCCAG
AGGGGCAGCGCTTTTCCCGGTCCCTGCCACTGCCACGTCCTCTCTACAGT
CCTACCCTACACAATCACCGTGGGAGGTAAAACCACGGGGAGGGCACGAA
GAAGGAAGGAGGCAACCGGACCACGGGCGCGGCGGCTTCCCCCGAGGAGC
AGCAGGCTCGTCGCTGCCTGGCTTCCAGCAGGCGGCAGCTCCATTTGCTC
CACTTCCCGCCCCACTTTTTTTGCCTTATTCGGGCTACGGCCAGTCGAGG
GTGGCGAACGAGAGCGTCCCTGCCCCTCCCAGTAATTTGCCCACCCCGGT
GGCTCTACGGCGGCAGCAAGAGGAGGTCGTAAAGCAGATGATGTGGGCGG
AAGGGCGGGAGGTAGGGAGGGAGGTAGGGAGGGAGGTAGAGCCGGCTGTT
CCTTCCCTTGCTGGTCTCCCGAGTGCCTTACAGACGGGCAACAGCGGGGA
GGTAGGTGAAGGAAGGAATGATATGGCGGGAAGAGATGAGGAGAGAGGGT
GGGATGCGCACGTGCTGGGGGAGTACGACATCAACCGTTTTTTCGAGGAC
AACGAGTAA back to top
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