Naga_101102g3, gene6646 (gene) Nannochloropsis gaditana

Overview
NameNaga_101102g3
Unique Namegene6646
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:691493..693546 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_101102g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:691493..693546 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL034ngnoL034Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL032ngnoL032Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02940NO16G02940Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6874rna6874-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6874rna6874Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6874

>rna6874-protein ID=rna6874-protein|Name=rna6874|organism=Nannochloropsis gaditana|type=polypeptide|length=452bp
PLPLPTPLPSPPSGTWSGSSVISSLSSSGASSHYSSIPPSSSFHPSPSSS
QSGGSQGSGGGGGGQGGRYLTTQPGRDDGALLCLNADVVKRPISATLREP
PPPFLSSPQASTVVAPGTLPPASLSFATPATLAAARSMLQGFLQGKYPLS
STCTSSTSSVASTGTAASRPIIVRRARRACAYCHTKKISCTCTRPCRRCQ
DLNLVCSDYVPRPRHLGRSKGSRSPPQPRVGRTGAGYGGYARQEGEREGG
REIGERPSPPLVMPAARGAALFPVPATATSSLQSYPTQSPWEVKPRGGHE
EGRRQPDHGRGGFPRGAAGSSLPGFQQAAAPFAPLPAPLFLPYSGYGQSR
VANESVPAPPSNLPTPVALRRQQEEVVKQMMWAEGREVGREVGREVEPAV
PSLAGLPSALQTGNSGEVGEGRNDMAGRDEERGWDAHVLGEYDINRFFED
NE
back to top
Synonyms
Publications