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Properties
| Property Name | Value |
|---|
| Product | eukaryotic translation initiation factor 3 subunit l |
| Orig transcript id | gnl|cribi|Naga_100082g15.9368.mrna |
| Orig protein id | gnl|cribi|Naga_100082g15.9368 |
| Gene | eIF3l |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:438554..441212 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6760 ID=rna6760|Name=rna6760|organism=Nannochloropsis gaditana|type=mRNA|length=2325bp
CGCGTCGCCCTGTCACATGTCGTAGCGTTCCCACATGGAGGCCCTTGAAG
CAAAAGCATGTGTTTTCCTACCCGTGACCATCCTAAGGCAAGGCCAGTGA
TTTGGTGTGTTGCGCCCGTATTCGTGTGTCTACCCACCCTGATTCCAGCT
TTTGTTCATCTCCCGGTATGTTATCCTTTCAGCTGAAAGCGGACGTGTCA
GCGACTGCAACAAAAGGAATCGACTCGATCCATCGCAAATATGAGGGGTT
GGATGCGCATTGGTAGGCGTGATGCGGCGTCTATTTGGACTTTATACGCT
TCAGGCTGCTGCAGGAGGTTGACAAGCTCCCACGGGTCACGATTCATGAG
TTTCACTGAGAAAAAAGGGCCTCAGGGCTGGACCGGGACGGGTACCCTTT
GTAGATGTGAATCGCACCGTAGTCGCCAGCTTCGACATCCTGCTTCCTCG
ATTTTGCTGTCCCACGGTCACTGCATCCTAGCAATCGCAGCAGGACTCGC
CGTGGTTGCGCAAAACGGCGGTGTCAGCAATGAAAGCCGTGGTCGGGACA
CCCTTTGTGAGGCCTCTCTCGAGGCTTCCCCCGAGCAGCAGTCAAGAGAT
GCAGGAGTCAATCAAGGTGACCTCCCGTACGATTTCGTGGTTGCCCTTCG
AGATATTGTGGGTCCAGAATATGTGTCCCAAGATTCAGAGGAACGCGCAC
TCCACGGAAAGCCGTGGAGCTCGTACCACAAGATCACCCAGATTCCCGAC
GTCATAGTGCAGCCTGCGTCCACGGAACAAGTATCACGCATCATGCGTCT
ATGCTGGTTGTATCGCATTCCTGTCGTACCCTACGGAGGCGCTACCTCAC
TTGAAGGCCATACATTGGCGCCTTCCCGGGGTTTGTCTTTGGACATGAAC
CGCATGAACCGCATCCTGCGAGTGTCCATCGAGGATCTTGACGCCACCGT
AGAGGCCGGCCTGGGCTACTTGGATCTAAACGAGGCCCTGCGCGACCAGG
GCGCACACTTTCCCCTAGACCCGGGGCCAGGGGCATCCATCGGCGGCATG
TGTGCATGTCGATGTTCTGGCTCAACCGCTGTCAAGTATGGCACGATGCG
CGACAGCGTGCTGAGCGTGACGGCGGTGCTGGCCGACGGGACAGTCCTGA
AGACGGGCTCGAGGGCGCGCAAGTCTGCGGCAGGTTACGACCTGACGCGC
CTACTGATTGGAAGCGAGGGAACCCTTGGCATCGTCACCGAAGTCACCCT
GCGCTTGCGTCGTAAGCCCAAGCGGTCTGCGGCCATTCGCGTCTGTTTCC
CCTCCGTTCGCGAGGCGGCGGCGGCTGCCAGCGCCACCCTGCAGGCTGGG
GTCGAGGTCGGGCGTTGTGAGCTGATGGACGACCATATGGTGCGGATCAT
GAATGAGATGAATGGCCTGCGTGACACGGAGGCCACCACACTGCTTTACG
AAGTCGTGGGCATCTCCGATGTTGACGTGGAGGGACAGATGTCACTTGTC
GAGCACGTGGCGCGGAAGCACGGAGGGTACGGGATCCTACACTCCAAAGA
TGAGGCAGACGCGGTCGACATGTGGCGGGCGCGCAAGGAGGCACTGTGGG
CGGCGCAGGCTGCCTACCCGGACAGGGAAGTGATGATCACCGACGTGTGC
GTCCCGCTCTCGAAGCTGCCCGACCTGATCGGACAGAGCAAGGACAAAAT
TCGAGCCTCATCCCTGCCCTCGCCCCTGGTGGCGCATGCCGGAGACGGAA
ACTTCCACGCCTTTATCATCTTCCGCCCAGACAGGCCAGAGGAGGTGGAG
GAGGCCAAGGGTCTGAGCGCTTTCATGGTAAAGTCGGCGCTGGCGCTGGA
CGGGACATGCACCGGCGAGCACGGCATTGGGGTGGGAAAGATCAAGTACC
TGGAGAAGGAGTTTGGGACTGGCGCCTTGCAGACGATGGCAGCGATCAAG
CGCGCCTTAGATCCGTACAATTTGCTGAATCCCGGAAAGGTATTGCCTCA
GTCTCTTGTTCCTGCGCAAGAATATTTCCGTTAGTGTACTTGATTTGAGA
AGCACGCTATCTTTTATTACAAGATGAAATAAAGCGAGCAAGTCAGTCGA
ATTTACAAATTCCCTCGTTTCCTTTGGATGCAAATTTCTAATTTTGTTTG
TGCATTTTTTTTCCTTTAGTTTTCAACGAGCCTTCATTCCAGCACTTGCC
TTCGCCGTGACCTTGTCCAGTACAGCCAGACTCCATTACTTCCGCAAGGT
CCTAGCTAAATTTTCAAGCTTACGAATTTCATGTTGGAAATGCTTGCTCA
CCTCCTGGCGATTCTCATGCTCCCC back to topprotein sequence of rna6760 >rna6760-protein ID=rna6760-protein|Name=rna6760|organism=Nannochloropsis gaditana|type=polypeptide|length=555bp
MSAKFKTFVTRLHGAVRAERPNEERIQEVYQESEEVAKEFNNDPWPKAEE
VSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTAL
IQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQ
SAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSA
EGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEP
VMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSV
LDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVA
AMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVS
APKFISPATDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEV
RQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLE
ASTGSSAQQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLA
RTLRK back to topmRNA from alignment at CM002469.1:438554..441212- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6760 ID=rna6760|Name=rna6760|organism=Nannochloropsis gaditana|type=mRNA|length=2659bp|location=Sequence derived from alignment at CM002469.1:438554..441212- (Nannochloropsis gaditana)
CCGCGTCCGCGTCGCTTTCCTGCCCTGTCTACACGCGTACCTCTTTCATA
TGGCATTAAATTCCTTTTCCATTGATACAGCATCATCAGCTTTCCTGCTT
GGCTCGGTCACATGAGTGCGAAATTCAAGGTGAGATCGATGGTGCTCGTA
ACCTATCACGGCACGCGTGCGGTTGTCGGAATTCGGGTGTCTTTTTCTTG
TATATCAGGCATACAGTTATTTTGCAAGACTTCAAAAATGTGCCTTGCAT
TTGCAATACTCGGGGAATATTTTGCACGCTTTTTCAACGTTCATTGGACG
GTGGTAAAATGGGGGTGAAAAATGTTGTGAGAAGATTGATGGGACTGGAT
TAAACGTGAGGGGTCCTTGATATGGGTAAAATCTGCGGACGTGCCATGCA
GCCTTACTTCTGATAAGCAACGTGCATAATGTGTTTGAGCTGCTGTCCAG
GGGGTCGGTGCCAGCAGCCGACAGCGCATGTGGAATAGATTCAGCACGCT
GTTGCTCCTACTCTTCTAGGGATACGTCCTCATACCTCGCACGCACAATT
ATTGAAATTTACAGACATTTGTGACACGCCTGCATGGTGCTGTCCGAGCA
GAGCGTCCGAATGAAGAGCGAATCCAGGAGGTATATCAGGAGTCAGAGGA
GGTGGCGAAGGAGTTTAACAACGATCCTTGGCCCAAGGCGGAGGAAGTGT
CCGCGCTCGTGCAGGAGGATCGAGTCTTCCTGTTGCTCTATACAGAGATG
GCTTTTCAGGCTTTCTTTAAGAACAAAAATATGAAGGCCACAATGGAGGA
CCGGGTAGGTTCCTGGCAGAACTACAGCGCGCTCTTCACGGCCCTCATCC
AGGACGAGGCGGGGGACGCCATGACGGAGGCAGCGCGCGCTCACGGCGCG
GAGGTTATGATCACGGGCAAGTGGGCCTTTGACATCATTTACGAGTTCGT
CTACCAGTTCCAGGAGGCTTGCCAGTATCGGGCCTCGGCCCTCCAGAGCG
CAATAAACGAGTCTGAGCTCCAAACCGTGCTCGATCACAAGGACGTGTGG
ACGGTGGACAAAGTCTTCAACTTCCTCCACCAGCTCGTCAAGGTCTCCAA
GGTGCGGGAGGTACTGGAGGTTGCATCGCTCAGCAAGGGTAGTGCGGAGG
GCGAGGGTGGAGGTGCGGGAGCGGTGCCTTTGGTAACGTATCCGAGCAAG
CTGCATTACCTTCTCGGGTACTTCGCGCTCGTGGGCTTGAATCGCCTGGA
GTGCTTGCTGGGAGACTTCCAGAATGCGCTGTCGGTAGCTGAACCGGTCA
TGGAGGAGAGCCGCTCGGTCCATGCAGGTGCAGGCCTGCTACTTTCCTCT
AGCATCATAGCCCAGGTCTCGCTGCACTATCATATCGGTCTCAGTTATTT
GATGATCCGCAAGTACCACGAGGCCATTAAAACCTTTGTTTCGGTCCTGG
ACGTTTATTTTAAATACATGGAATCGGTCAAGCAGCAGCAACGAGCACAG
CAGCAACAGCAACAGCAACAGCAGGGCCAGCCTGTTCAGCCGCCTCCCAA
GAATGCCGATGACCTTGCGGCAGGCAAGCTGGTGGACAAAGTGGCAGCTA
TGCTCCTGATCGTACATCACCTTTGTCCTGGACAGCACATTCCCGAGAAT
ATTCGAGGACACTTAACGGGCGAGAAGATGAAAGACAAGCTACGTCATGT
GCAGTCGGGCGACGTGGACGAGATCGTCACGCTCTTTGTCGTGTCCGCGC
CGAAGTTCATCAGCCCTGCCACAGATTATGACGCTGCTGCATCCTCCATG
GGAGTGGGAGGACAAGTCGGGACTGGGCGCGGCGGGAGTGGCGGGCGGAC
GGGCACATACGGAGGTTTGCAGCGCATAGTCTTCGCAGAAGAAGTGCGAC
AGATGCTAGAATTGCGGAAGCTGCGTGACTATTTGCGTCTGTATTCCACC
ATCGGCTTAGAGAAGCTATCGGCTTTTACGGGGCAAGAGCCGGAGAATAT
TCGTCGGGAACTTGTCCAGTACAAACATAAATTGCTGCAGTTGGAAGCGA
GCACTGGTAGCTCGGCTCAACAGAGCCTTGATTTCCACTATTATCTGGAT
GGCGACATGGTGCATGTCGACGCCGGGGAGCATGAGAATCGCCAGGAGGT
GAGCAAGCATTTCCAACATGAAATTCGTAAGCTTGAAAATTTAGCTAGGA
CCTTGCGGAAGTAATGGAGTCTGGCTGTACTGGACAAGGTCACGGCGAAG
GCAAGTGCTGGAATGAAGGCTCGTTGAAAACTAAAGGAAAAAAAATGCAC
AAACAAAATTAGAAATTTGCATCCAAAGGAAACGAGGGAATTTGTAAATT
CGACTGACTTGCTCGCTTTATTTCATCTTGTAATAAAAGATAGCGTGCTT
CTCAAATCAAGTACACTAACGGAAATATTCTTGCGCAGGAACAAGAGACT
GAGGCAATACCTTTCCGGGATTCAGCAAATTGTACGGATCTAAGGCGCGC
TTGATCGCTGCCATCGTCTGCAAGGCGCCAGTCCCAAACTCCTTCTCCAG
GTACTTGATCTTTCCCACCCCAATGCCGTGCTCGCCGGTGCATGTCCCGT
CCAGCGCCAGCGCCGACTTTACCATGAAAGCGCTCAGACCCTTGGCCTCC
TCCACCTCC back to topCoding sequence (CDS) from alignment at CM002469.1:438554..441212- >rna6760 ID=rna6760|Name=rna6760|organism=Nannochloropsis gaditana|type=CDS|length=3336bp|location=Sequence derived from alignment at CM002469.1:438554..441212- (Nannochloropsis gaditana)
ACATTTGTGACACGCCTGCATGGTGCTGTCCGAGCAGAGCGTCCGAATGA
AGAGCGAATCCAGGAGGTATATCAGGAGTCAGAGGAGGTGGCGAAGGAGT
TTAACAACGATCCTTGGCCCAAGGCGGAGGAAGTGTCCGCGCTCGTGCAG
GAGGATCGAGTCTTCCTGTTGCTCTATACAGAGATGGCTTTTCAGGCTTT
CTTTAAGAACAAAAATATGAAGGCCACAATGGAGGACCGGGTAGGTTCCT
GGCAGAACTACAGCGCGCTCTTCACGGCCCTCATCCAGGACGAGGCGGGG
GACGCCATGACGGAGGCAGCGCGCGCTCACGGCGCGGAGGTTATGATCAC
GGGCAAGTGGGCCTTTGACATCATTTACGAGTTCGTCTACCAGTTCCAGG
AGGCTTGCCAGTATCGGGCCTCGGCCCTCCAGAGCGCAATAAACGAGTCT
GAGCTCCAAACCGTGCTCGATCACAAGGACGTGTGGACGGTGGACAAAGT
CTTCAACTTCCTCCACCAGCTCGTCAAGGTCTCCAAGGTGCGGGAGGTAC
TGGAGGTTGCATCGCTCAGCAAGGGTAGTGCGGAGGGCGAGGGTGGAGGT
GCGGGAGCGGTGCCTTTGGTAACGTATCCGAGCAAGCTGCATTACCTTCT
CGGGTACTTCGCGCTCGTGGGCTTGAATCGCCTGGAGTGCTTGCTGGGAG
ACTTCCAGAATGCGCTGTCGGTAGCTGAACCGGTCATGGAGGAGAGCCGC
TCGGTCCATGCAGGTGCAGGCCTGCTACTTTCCTCTAGCATCATAGCCCA
GGTCTCGCTGCACTATCATATCGGTCTCAGTTATTTGATGATCCGCAAGT
ACCACGAGGCCATTAAAACCTTTGTTTCGGTCCTGGACGTTTATTTTAAA
TACATGGAATCGGTCAAGCAGCAGCAACGAGCACAGCAGCAACAGCAACA
GCAACAGCAGGGCCAGCCTGTTCAGCCGCCTCCCAAGAATGCCGATGACC
TTGCGGCAGGCAAGCTGGTGGACAAAGTGGCAGCTATGCTCCTGATCGTA
CATCACCTTTGTCCTGGACAGCACATTCCCGAGAATATTCGAGGACACTT
AACGGGCGAGAAGATGAAAGACAAGCTACGTCATGTGCAGTCGGGCGACG
TGGACGAGATCGTCACGCTCTTTGTCGTGTCCGCGCCGAAGTTCATCAGC
CCTGCCACAGATTATGACGCTGCTGCATCCTCCATGGGAGTGGGAGGACA
AGTCGGGACTGGGCGCGGCGGGAGTGGCGGGCGGACGGGCACATACGGAG
GTTTGCAGCGCATAGTCTTCGCAGAAGAAGTGCGACAGATGCTAGAATTG
CGGAAGCTGCGTGACTATTTGCGTCTGTATTCCACCATCGGCTTAGAGAA
GCTATCGGCTTTTACGGGGCAAGAGCCGGAGAATATTCGTCGGGAACTTG
TCCAGTACAAACATAAATTGCTGCAGTTGGAAGCGAGCACTGGTAGCTCG
GCTCAACAGAGCCTTGATTTCCACTATTATCTGGATGGCGACATGGTGCA
TGTCGACGCCGGGGAGCATGAGAATCGCCAGGAGGTGAGCAAGCATTTCC
AACATGAAATTCGTAAGCTTGAAAATTTAGCTAGGACCTTGCGGAAGTAA
ATGAGTGCGAAATTCAAGACATTTGTGACACGCCTGCATGGTGCTGTCCG
AGCAGAGCGTCCGAATGAAGAGCGAATCCAGGAGGTATATCAGGAGTCAG
AGGAGGTGGCGAAGGAGTTTAACAACGATCCTTGGCCCAAGGCGGAGGAA
GTGTCCGCGCTCGTGCAGGAGGATCGAGTCTTCCTGTTGCTCTATACAGA
GATGGCTTTTCAGGCTTTCTTTAAGAACAAAAATATGAAGGCCACAATGG
AGGACCGGGTAGGTTCCTGGCAGAACTACAGCGCGCTCTTCACGGCCCTC
ATCCAGGACGAGGCGGGGGACGCCATGACGGAGGCAGCGCGCGCTCACGG
CGCGGAGGTTATGATCACGGGCAAGTGGGCCTTTGACATCATTTACGAGT
TCGTCTACCAGTTCCAGGAGGCTTGCCAGTATCGGGCCTCGGCCCTCCAG
AGCGCAATAAACGAGTCTGAGCTCCAAACCGTGCTCGATCACAAGGACGT
GTGGACGGTGGACAAAGTCTTCAACTTCCTCCACCAGCTCGTCAAGGTCT
CCAAGGTGCGGGAGGTACTGGAGGTTGCATCGCTCAGCAAGGGTAGTGCG
GAGGGCGAGGGTGGAGGTGCGGGAGCGGTGCCTTTGGTAACGTATCCGAG
CAAGCTGCATTACCTTCTCGGGTACTTCGCGCTCGTGGGCTTGAATCGCC
TGGAGTGCTTGCTGGGAGACTTCCAGAATGCGCTGTCGGTAGCTGAACCG
GTCATGGAGGAGAGCCGCTCGGTCCATGCAGGTGCAGGCCTGCTACTTTC
CTCTAGCATCATAGCCCAGGTCTCGCTGCACTATCATATCGGTCTCAGTT
ATTTGATGATCCGCAAGTACCACGAGGCCATTAAAACCTTTGTTTCGGTC
CTGGACGTTTATTTTAAATACATGGAATCGGTCAAGCAGCAGCAACGAGC
ACAGCAGCAACAGCAACAGCAACAGCAGGGCCAGCCTGTTCAGCCGCCTC
CCAAGAATGCCGATGACCTTGCGGCAGGCAAGCTGGTGGACAAAGTGGCA
GCTATGCTCCTGATCGTACATCACCTTTGTCCTGGACAGCACATTCCCGA
GAATATTCGAGGACACTTAACGGGCGAGAAGATGAAAGACAAGCTACGTC
ATGTGCAGTCGGGCGACGTGGACGAGATCGTCACGCTCTTTGTCGTGTCC
GCGCCGAAGTTCATCAGCCCTGCCACAGATTATGACGCTGCTGCATCCTC
CATGGGAGTGGGAGGACAAGTCGGGACTGGGCGCGGCGGGAGTGGCGGGC
GGACGGGCACATACGGAGGTTTGCAGCGCATAGTCTTCGCAGAAGAAGTG
CGACAGATGCTAGAATTGCGGAAGCTGCGTGACTATTTGCGTCTGTATTC
CACCATCGGCTTAGAGAAGCTATCGGCTTTTACGGGGCAAGAGCCGGAGA
ATATTCGTCGGGAACTTGTCCAGTACAAACATAAATTGCTGCAGTTGGAA
GCGAGCACTGGTAGCTCGGCTCAACAGAGCCTTGATTTCCACTATTATCT
GGATGGCGACATGGTGCATGTCGACGCCGGGGAGCATGAGAATCGCCAGG
AGGTGAGCAAGCATTTCCAACATGAAATTCGTAAGCTTGAAAATTTAGCT
AGGACCTTGCGGAAGTAAATGAGTGCGAAATTCAAG back to top
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