eIF3l, gene6535 (gene) Nannochloropsis gaditana

Overview
NameeIF3l
Unique Namegene6535
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:438554..441212 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100082g15
Gene biotypeprotein_coding
GeneeIF3l
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:438554..441212 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL035ngnoL035Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02350NO16G02350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6760rna6760-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6760rna6760Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6760

>rna6760-protein ID=rna6760-protein|Name=rna6760|organism=Nannochloropsis gaditana|type=polypeptide|length=555bp
MSAKFKTFVTRLHGAVRAERPNEERIQEVYQESEEVAKEFNNDPWPKAEE
VSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTAL
IQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQ
SAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSA
EGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEP
VMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSV
LDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVA
AMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVS
APKFISPATDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEV
RQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLE
ASTGSSAQQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLA
RTLRK
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Synonyms
Publications