NO16G02350, NO16G02350 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02350 vs. NCBI_GenBank
Match: EWM23936.1 (eukaryotic translation initiation factor 3 subunit l [Nannochloropsis gaditana]) HSP 1 Score: 653.7 bits (1685), Expect = 4.600e-184 Identity = 365/420 (86.90%), Postives = 383/420 (91.19%), Query Frame = 0
Query: 29 MSGKFKAFVTRLHGAVRAERPNEERIHDVYQESEEVAKEFNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFISPATDYEAAVS 449
MS KFK FVTRLHGAVRAERPNEERI +VYQESEEVAKEFN+DPWPKAE V++LVQ DRVFLLLYTEMAFQAFFKNKN+KATM DRVGSW+NYSALFTALIQDE G AMTEAA+AHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSA NE+ELQTVL+HKDVWTVDKVFNFLHQLVKVSKVREVLE A+LSKG +GE G VPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQ+AL+VAEPVMEESRS +AGAGLLLSSSIIAQVSLHYHIGLSYLMIRKY EAIKTFVSVLDVYFK+MES+K XXXXXXXXXXXXXXXXXXXXXXX VDKVAAMLLIVHHLCPGQHIPENIRGHL GEKMKDKLR VQSGDVD IVTLFV+SAPKFISPATDY+AA S
Sbjct: 1 MSAKFKTFVTRLHGAVRAERPNEERIQEVYQESEEVAKEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGE--GGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPATDYDAAAS 416
BLAST of NO16G02350 vs. NCBI_GenBank
Match: CBJ32763.1 (Eukaryotic translation initiation factor 3 subunit l eukaryotic translation initiation factor eIF3 s [Ectocarpus siliculosus]) HSP 1 Score: 172.9 bits (437), Expect = 2.400e-39 Identity = 122/406 (30.05%), Postives = 196/406 (48.28%), Query Frame = 0
Query: 34 KAFVTRLHGAVRAERPNEERIHDVYQESEEVAKE--FNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFI 438
K FV LH A+R + +E + +Y + + + F WP+AE +A+ D +FL Y E+ + F NV+ M D + SWENY LF AL+ D +IT +WAFD+++EFVYQFQ CQ + + +E EL+ D W V V +LH L+KVS + +LE+ A V + PS+LH + GYFA+VG++RL+CLLGD+ + + V E + ++ L + +++A V++H H GL++LM+++Y++A + +L H+ D++ K DK+ A++ I L PG I E ++ M + +DKL ++ GD A LF ++PKF+
Sbjct: 48 KDFVFDLHDAMRRAKRVDE-LEPLYNTTFKAVTDAYFKGSTWPEAEVIANQCSNDELFLCFYRELRNRHMFATTNVQ--MPDYLRSWENYCRLFDALLDCRD------------TNFVITEEWAFDLVHEFVYQFQSFCQMKGQR-RGGESEEELE------DAWAVQNVIGYLHGLIKVSNIMPILEAK------------KRPAANVAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNE------LFAGNMLAFVTVHQHAGLAFLMLKRYKDAAR----ILSEALVHVGRANRSGQLQRSGY----------------QDEVP--KTADKMMALMAIATSLAPGAKIDEQMQSK-MQDTHRDKLAKMAKGDDQAFRDLFSWASPKFV 390
BLAST of NO16G02350 vs. NCBI_GenBank
Match: ORY52201.1 (eukaryotic translation initiation factor 3 subunit 6 interacting protein-like protein [Neocallimastix californiae]) HSP 1 Score: 170.2 bits (430), Expect = 1.500e-38 Identity = 125/419 (29.83%), Postives = 206/419 (49.16%), Query Frame = 0
Query: 28 RMSGKFKAFVTRLHGAVRAERPNEERIHDVYQESEEV-----AKEFNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSK-LHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFISPA 441
++ G+ K F+ H + E HD+ Q E + + + + PWP+A +A LV D +FL+LY E+ ++ + N T+ DR S+ NY LF ++ E ++ + +W +DII EF+YQFQ CQYR+ + NE EL+++ E D+W V V N L+ L++ S + E L ++K G G+ + + G + SK L+ +LGYF+++GL R+ CLLGD+ AL E V +R+ + V+ +Y++G +Y+M+R+Y +AIK F+SVL Y +++ K A K +++ A+L I LCP I E +++ EK ++L ++Q GD+ LF + PKFI+PA
Sbjct: 46 KIPGEVKKFILNFHRIL-----VEHSYHDLGQIYEILFNRLTEQYYKNQPWPEAVVIAPLVNNDDLFLILYKELYYRHIYAKLN--PTINDRFNSYLNYCDLFNYILAPE-----------KPVDLELPNQWLWDIIDEFIYQFQSFCQYRSKV--KSKNEIELKSLRERPDIWNVHNVLNVLYSLIQKSNINEQL---FVNKNG--GDMMEAAG------EFGSKQLYKMLGYFSIIGLLRVHCLLGDYSLALKTMENVELHNRN-------IFIRVSACHVTTYYYVGFAYMMMRRYSDAIKIFISVLQ-YINRIKNFKTLSYQYE-----------------------ATAKKSEQMYALLAICITLCP-TGIDEATHSNMI-EKYGEQLNKMQKGDLKVFEELFTYACPKFINPA 400
BLAST of NO16G02350 vs. NCBI_GenBank
Match: ORX60915.1 (hypothetical protein BCR36DRAFT_578990 [Piromyces finnis]) HSP 1 Score: 168.7 bits (426), Expect = 4.500e-38 Identity = 124/419 (29.59%), Postives = 207/419 (49.40%), Query Frame = 0
Query: 28 RMSGKFKAFVTRLHGAVRAERPNEERIHDV-----YQESEEVAKEFNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSK-LHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFISPA 441
++ + K F+ H + E HD+ Y ++ + + + WP+AE +A LV D +FL+LY E+ ++ + + T+ DR S+ NY LF ++ E E+ + +W +DII EF+YQFQ CQYR+ + NE EL+++ E D+W V V N L+ L++ S + E L ++K G G+ + + G + SK L+ +LGYF+++GL R+ CLLGD+ AL + E + +R+ + L S V+ +Y++G +Y+M+R+Y +AIKTF S+L Y +++ K A K +++ A+L I LCP I E +++ EK + L ++Q GD+ LF + PKFI+PA
Sbjct: 43 KIPNEVKKFILNFHKIL-----VEHTFHDLQNIYEYSYNKLTEQFYKNVQWPEAEVIAPLVNNDAIFLILYKELYYRHIY--AKLTPTINDRFNSYLNYCDLFNYILAPE-----------KPVELELPNQWLWDIIDEFIYQFQSFCQYRSKV--KSKNEIELKSLRERPDIWNVHNVLNVLYSLIQKSNINEQL---LVNKNG--GDMMEAAG------EFGSKQLYKMLGYFSIIGLLRVHCLLGDYSLALKMMENIELHTRN------IFLRVS-ACHVTTYYYLGFAYMMMRRYSDAIKTFTSILH-YINRIKNYKTLSYQYE-----------------------ATNKKSEQMYALLAICITLCP-TGIDEETHSNMV-EKYGEHLSKMQKGDLKVFEELFTYACPKFINPA 397
BLAST of NO16G02350 vs. NCBI_GenBank
Match: XP_020624167.1 (eukaryotic translation initiation factor 3 subunit L-like, partial [Orbicella faveolata]) HSP 1 Score: 167.5 bits (423), Expect = 1.000e-37 Identity = 120/378 (31.75%), Postives = 187/378 (49.47%), Query Frame = 0
Query: 66 KEFNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLV----TYPSKLHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFISP 440
+ F PWP A+ VASLV GD+VFL+LY E+ ++ + +K T+ R S+ NY LF ++ ++ ++ + +W +DII EF+YQFQ QYR+ L+ E E+ T+ + +W V V N L+ LV+ SK+ L E N GG P + +P L+ +LGYF+L+GL RL LLGD+ A+ V E V +S L S Q++ +Y++G +YLM+++YQ+AI++F ++L +Y + +++ K D++ +L I LCP Q I EN+ L EK D+L+++Q GDV F + PKFISP
Sbjct: 19 RHFEKSPWPDADYVASLVDGDQVFLILYKELYYRHIY--NKLKPTLDHRFESYFNYCDLFNYILNTDEPVPLS-----------LPNQWLWDIIDEFIYQFQSFSQYRSKLLKK--GEDEVGTLRANTKIWNVHSVLNVLYSLVEKSKINHQL------------EVYNQGGDPDSVAGEFGIHP--LYKMLGYFSLIGLLRLHSLLGDYFQAIKVLENVELNKKS-------LYSRVPACQITTYYYVGFAYLMMKRYQDAIRSFSNIL-LYIQRTKNMFQTKSYQYEQIM----------------------KKNDQMYTLLAICLTLCP-QRIDENVHSQLR-EKCGDRLQRLQRGDVQTFEEAFSYACPKFISP 335
BLAST of NO16G02350 vs. NCBI_GenBank
Match: ORY63761.1 (hypothetical protein LY90DRAFT_505212 [Neocallimastix californiae]) HSP 1 Score: 167.5 bits (423), Expect = 1.000e-37 Identity = 122/396 (30.81%), Postives = 196/396 (49.49%), Query Frame = 0
Query: 51 EERIHD---VYQESEEVAKE--FNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSK-LHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFISPA 441
E HD +Y+ S E + + PWP+A +A LV D +FL+LY E+ ++ + N T+ DR S+ NY LF ++ E ++ + +W +DII EF+YQFQ CQYR+ + NE EL+++ E D+W V V N L+ L++ S + E L ++K G G+ + + G + SK L+ +LGYF+++GL R+ CLLGD+ AL E V +R+ V+ +Y++G +Y+M+R+Y +AIK F+SVL Y +++ K A K +++ A+L I LCP I E +++ EK ++L ++Q GD+ LF + PKFI+PA
Sbjct: 65 EHTYHDLGQIYEVSYNKLTEQYYKNQPWPEALVIAPLVNNDVLFLVLYKELYYRHIYAKLN--PTINDRFNSYLNYCDLFNYILAPE-----------KPVDLELPNQWLWDIIDEFIYQFQSFCQYRSKV--KSKNEVELKSLRERPDIWNVHNVLNVLYSLIQKSNINEQL---LVNKNG--GDMMEAAG------EFGSKQLYKMLGYFSIIGLLRVHCLLGDYSLALKTMENVELHNRN-------FFIRVSACHVTTYYYVGFAYMMMRRYSDAIKIFISVLQ-YINRIKNYKTLSYQYE-----------------------ATAKKSEQMYALLAICITLCP-TGIDEATHSNMI-EKYSEQLSKMQKGDLKVFEELFTYACPKFINPA 401
BLAST of NO16G02350 vs. NCBI_GenBank
Match: XP_009513941.1 (hypothetical protein PHYSODRAFT_551923 [Phytophthora sojae] >EGZ26666.1 hypothetical protein PHYSODRAFT_551923 [Phytophthora sojae]) HSP 1 Score: 167.2 bits (422), Expect = 1.300e-37 Identity = 121/380 (31.84%), Postives = 177/380 (46.58%), Query Frame = 0
Query: 68 FNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGA---GLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFISPATDYE 445
F WP+ AV SLV D FLLLY ++ F+ F ++ M +V SWE Y A+F ++ DG EA + +W FDI+ EFVYQ+Q CQYRA + EAE+ + E+ +W KV +LH LV+ SK+ E+L+ GA PSK+ LGYF+L+ L R L GD+ +L + EP+ ++S A + S VS+ YH+G + LM+ + AI++F +++ ++ AD KL +K A++ I LCPGQ + + I L+ EK DK ++Q GD+ A+ LF S PKFI PA E
Sbjct: 53 FKQASWPEPSAVESLVDEDPTFLLLYKQIYFRHLF--SRLQPGMDMKVASWETYVAIFDGVL---DGSLELEA---------LPSQWVFDIVGEFVYQYQTYCQYRAKV--ATKGEAEIASYQENLFIWDTSKVLGYLHALVRHSKIVEILK--------------EEEGAQA-----PSKVVKELGYFSLITLARAHVLFGDYYTSLKLLEPIDLANKSARGDAKTTAQIYEKSPGCHVSVFYHMGFAQLMLEDFAAAIRSFSTIILQVNRNRNYYSRF------------------------ADYEQLHKLTEKAMALVAIALFLCPGQRVNDQIHS-LIREKYGDKQSKLQKGDISALSELFGFSCPKFILPAVAVE 372
BLAST of NO16G02350 vs. NCBI_GenBank
Match: OUM65397.1 (hypothetical protein PIROE2DRAFT_53764 [Piromyces sp. E2]) HSP 1 Score: 166.0 bits (419), Expect = 2.900e-37 Identity = 123/419 (29.36%), Postives = 207/419 (49.40%), Query Frame = 0
Query: 28 RMSGKFKAFVTRLHGAVRAERPNEERIHDV-----YQESEEVAKEFNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSK-LHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFISPA 441
++ + K F+ H + E HD+ Y ++ + + + PWP+AE +A LV D +FL+LY E+ ++ + + T+ R S+ NY LF ++ E E+ + +W +DII EF+YQFQ CQYR+ + NE EL+++ E D+W V V N L+ L++ S + E L ++K G G+ + + G + SK L+ +LGYF+++GL R+ CLLGD+ AL + E + +R+ + L S V+ +Y++G +Y+M+R+Y +AIK F S+L Y +++ K A K +++ A+L I LCP I E +++ EK ++L ++Q GD+ LF + PKFI+PA
Sbjct: 48 KIPNEVKKFILNFHKIL-----VEHTYHDLQNIYEYTYNKLTEQFYKNIPWPEAEVIAPLVNNDVLFLILYKELYYRHIY--ARLTPTINHRFNSYLNYCDLFNFILAPE-----------KPVELELPNQWLWDIIDEFIYQFQSFCQYRSKV--KSKNEIELKSLRERPDIWNVHNVLNVLYSLIQKSNINEQL---LVNKNG--GDMMEAAG------EFGSKQLYKMLGYFSIIGLLRVHCLLGDYSLALKMMENIELHNRN------IFLRVS-ACHVTTYYYVGFAYMMMRRYSDAIKVFTSILH-YINRIKNYKTLSYQYE-----------------------ATNKKSEQMYALLAICITLCP-TGIDEETHSNMI-EKYGEQLSKMQKGDLKVFEELFTYACPKFINPA 402
BLAST of NO16G02350 vs. NCBI_GenBank
Match: ETK87591.1 (hypothetical protein L915_07997 [Phytophthora parasitica]) HSP 1 Score: 164.9 bits (416), Expect = 6.500e-37 Identity = 118/380 (31.05%), Postives = 175/380 (46.05%), Query Frame = 0
Query: 68 FNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQDALAVAEPV---MEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFKHMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIVTLFVLSAPKFISPATDYE 445
F WP+ AV SLV D FLLLY ++ F+ F ++ M +V SWE Y A+F ++ DG EA + +W FDI+ EFVYQ+Q CQ+RA + E E+ + E+ +W KV +LH LV+ SK+ E+L+ +K PS++ LGYF+L+ L R L GD+ +L + EP+ + SR + S VS+ YH+G + LM+ + AI++F +++ ++ AD KL +K A+L I LCPGQ + + I L+ EK DK ++Q GD+ A+ LF S PKFI PA E
Sbjct: 53 FKQASWPEPSAVESLVDEDPTFLLLYKQIYFRHLF--SRLQPGMDMKVASWETYVAIFDGIL---DGSLELEA---------LPSQWVFDIVGEFVYQYQSYCQFRAKV--ATKGEQEIASYTENLFIWDTSKVLGYLHALVRHSKIVEILKEEEGAKA-------------------PSEVVKELGYFSLITLARAHVLFGDYYTSLKLLEPIDLFNKSSRGEVKTTAQIHEKSPGCHVSVFYHMGFAQLMLEDFAAAIRSFSTIILQVNRNRNYYSRF------------------------ADYEQLHKLTEKAMALLAIALFLCPGQRVNDQIHS-LIREKYGDKQSKLQKGDISALTELFGFSCPKFILPAVAVE 372
BLAST of NO16G02350 vs. NCBI_GenBank
Match: XP_017236870.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Daucus carota subsp. sativus] >KZN06870.1 hypothetical protein DCAR_007707 [Daucus carota subsp. sativus]) HSP 1 Score: 164.9 bits (416), Expect = 6.500e-37 Identity = 130/422 (30.81%), Postives = 198/422 (46.92%), Query Frame = 0
Query: 34 KAFVTRLHGAVRAERPNEERIHDVYQESEEVAKE--FNSDPWPKAEAVASLVQGDRVFLLLYTEMAFQAFFKNKNVKATMGDRVGSWENYSALFTALIQDEDGQAMTEAAKAHG-AEVMITGKWAFDIIYEFVYQFQEACQYRASALQSATNEAELQTVLEHKDVWTVDKVFNFLHQLVKVSKVREVLESAALSKGGLDGETVNSGGAPVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQDALAVAEPVMEESRSGNAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYQEAIKTFVSVLDVYFK----HMESIKXXXXXXXXXXXXXXXXXXXXXXXXXNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLMGEKMKDKLRQVQSGDVDAIV---TLFVLSAPKFISP-ATDYE 445
K+FV L+ +R + N IH +Y+ S + E F PWP +AVA V D VF LLY EM F+ + + T+ R+ SW+NY +LF ++ HG + + +W +D++ EFVYQFQ CQYRA EAE+ + + W V V NFL LV+ S + ++LE K GL+ T N G T S + +LGYF++VGL R+ CLLGD+ L +P+ + S+ G + + I + ++ YH G + LM+R+Y EAI+ F +L +K H +S + K +++ A+L + LCP + E + EK +K+ ++Q D +A LF + PKFI+P A YE
Sbjct: 28 KSFVVHLYRHIREK--NVYEIHQMYETSFQTLSERLFKDTPWPSVDAVAQYVDNDHVFCLLYREMWFRHLY--ARLSPTLKQRIDSWDNYCSLFQVVL--------------HGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAK--MKNKTEAEIALLKQFDQAWNVYGVLNFLQALVEKSTIIQILEQ---EKEGLEQFTANDGYD----YTGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCIQPI-DISQQG------VFTIVIGSHIATIYHYGFANLMLRRYVEAIREFNKILLYIYKTKQYHQKSPQYEQIL----------------------------KKNEQMYALLAVSLSLCPQLKLVEETVNSQLREKYGEKMLRMQRYDDEAFALYDELFSYACPKFITPSAPTYE 387 The following BLAST results are available for this feature:
BLAST of NO16G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02350 ID=NO16G02350|Name=NO16G02350|organism=Nannochloropsis oceanica|type=gene|length=3774bpback to top protein sequence of NO16G02350.1 >NO16G02350.1-protein ID=NO16G02350.1-protein|Name=NO16G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=549bpback to top protein sequence of NO16G02350.2 >NO16G02350.2-protein ID=NO16G02350.2-protein|Name=NO16G02350.2|organism=Nannochloropsis oceanica|type=polypeptide|length=491bpback to top Synonyms
Publications
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