EWM23936.1, cds6744 (CDS) Nannochloropsis gaditana

Overview
NameEWM23936.1
Unique Namecds6744
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:441084..441101 -
Alignment locationCM002469.1:438999..440648 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23936.1
Producteukaryotic translation initiation factor 3 subunit l
Orig transcript idgnl|cribi|Naga_100082g15.9368.mrna
GeneeIF3l
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:441084..441101 -
CM002469.1supercontigCM002469.1:438999..440648 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR019382eIF3l
Homology
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|585105221|gb|EWM23936.1| (eukaryotic translation initiation factor 3 subunit l [Nannochloropsis gaditana])

HSP 1 Score: 1149.04 bits (2971), Expect = 0.000e+0
Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 0
Query:    1 MSAKFKTFVTRLHGAVRAERPNEERIQEVYQESEEVAKEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPATDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSAQQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLRK 555
            MSAKFKTFVTRLHGAVRAERPNEERIQEVYQESEEVAKEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPATDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSAQQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLRK
Sbjct:    1 MSAKFKTFVTRLHGAVRAERPNEERIQEVYQESEEVAKEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPATDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSAQQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLRK 555          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|1176106579|ref|XP_020624167.1| (eukaryotic translation initiation factor 3 subunit L-like, partial [Orbicella faveolata])

HSP 1 Score: 229.95 bits (585), Expect = 1.774e-65
Identity = 157/523 (30.02%), Postives = 262/523 (50.10%), Query Frame = 0
Query:   38 KEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPAT-DYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSA-----QQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLR 554
            + F   PWP A+ V++LV  D+VFL+LY E+ ++  + NK +K T++ R  S+ NY  LF  ++  +    ++           +  +W +DII EF+YQFQ   QYR+  L+    E E+ T+  +  +W V  V N L+ LV+ SK+   LEV +   G  +   G  G  PL       + +LGYF+L+GL RL  LLGD+  A+ V E V    +S+++            Q++ +Y++G +YLM+++Y +AI++F ++L +Y +  +++ Q +  Q +Q  ++                     D++  +L I   LCP Q I EN+   L  EK  D+L+ +Q GDV      F  + PKFISP   ++DA  ++                       LQ  VF  EV Q   +  +R YL+LY+T+ + KL+AF   +    R +L+ +KHK   L  + G+ A     Q S +  +Y+D DM+H+   + E R      F  +I K + + ++++
Sbjct:   19 RHFEKSPWPDADYVASLVDGDQVFLILYKELYYRHIY-NK-LKPTLDHRFESYFNYCDLFNYILNTDEPVPLS-----------LPNQWLWDIIDEFIYQFQSFSQYRSKLLKKG--EDEVGTLRANTKIWNVHSVLNVLYSLVEKSKINHQLEVYN-QGGDPDSVAGEFGIHPL-------YKMLGYFSLIGLLRLHSLLGDYFQAIKVLENVELNKKSLYSRVP-------ACQITTYYYVGFAYLMMKRYQDAIRSFSNIL-LYIQRTKNMFQTKSYQYEQIMKKN--------------------DQMYTLLAICLTLCP-QRIDENVHSQLR-EKCGDRLQRLQRGDVQTFEEAFSYACPKFISPVPPNFDAPPANFNREP----------------FNLQLKVFMNEVSQQSLIPVIRSYLKLYTTMPIAKLAAFLDMDENQFRTQLLCFKHKQRNLVWTKGTDALEGELQSSSEVDFYIDQDMIHIADTKVERR--YGDFFIRQIHKFDEVTKSIQ 470          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|156375556|ref|XP_001630146.1| (predicted protein [Nematostella vectensis] >gi|224494949|sp|A7SDW5.1|EIF3L_NEMVE RecName: Full=Eukaryotic translation initiation factor 3 subunit L; Short=eIF3l >gi|156217161|gb|EDO38083.1| predicted protein [Nematostella vectensis])

HSP 1 Score: 229.95 bits (585), Expect = 6.443e-65
Identity = 167/557 (29.98%), Postives = 278/557 (49.91%), Query Frame = 0
Query:    6 KTFVTRLHGAVRAERPNEERIQEVYQE--SEEVAKEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPAT-DYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSA-----QQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLR 554
            K F+   H  V  +  N   IQ +Y+   ++   + FN  PWP+AE ++ LV  D+VFL+LY E+ ++  + NK +K T+E R  S+ NY  LF  ++  +    +T           +  +W +DII EF+YQFQ   Q+R S LQ+   E E+  +  +  +W +  V N L+ LV+ S++   LE+ + + G+ +   G  G  PL       + +LGYF+L+GL RL  LLGD+  A+ V   V E +R+       + S     Q++ +Y++G +YLM+R+Y +AI+ F SVL +Y +  +++ Q +  Q ++  ++                     D++  +L I   LCP Q + EN+   L  EK  +K++ +Q GD+      F  S PKF+SP   ++DA  ++                       LQ  VF  EV Q   +  +R YL+LY+T+ + KL+AF   +    R +L+ YKHK   L  + G+       Q S +  +Y+D DM+H+   + + R    + F  +I K + +AR L+
Sbjct:   40 KRFIHFFHQHVLEQ--NLYEIQSIYENGFNKLTDRYFNKTPWPEAEFIAPLVSGDQVFLILYKELYYRHIY-NK-LKPTVEQRFESYYNYCDLFNYILNTDEPVPLT-----------LPNQWLWDIIDEFIYQFQAFSQFR-SKLQNK-PEDEIDVLRANSKIWNIHSVLNVLYSLVEKSRINYQLEMYN-TNGNPDEVSGEFGIHPL-------YKMLGYFSLIGLLRLHSLLGDYFQAIKVLSNV-ELTRNT------MYSRIPACQITTYYYVGFAYLMMRRYQDAIRCFSSVL-LYIQRTKNMLQTKSYQYEEIMKKN--------------------DQMYNLLAIALTLCP-QQLDENVHSQLR-EKCTEKMQKLQKGDLQMFEECFSYSCPKFVSPVPPNFDAPPANYNREP----------------FNLQLKVFMNEVAQQSMIPVIRSYLKLYTTMPIAKLAAFLDMDEATFRNQLLCYKHKQRNLVWTKGTDGLDGEQQSSSEVDFYIDRDMIHIADTKVDRR--YGEFFMRQIYKFDEMARNLQ 523          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|298711716|emb|CBJ32763.1| (Eukaryotic translation initiation factor 3 subunit l eukaryotic translation initiation factor eIF3 s [Ectocarpus siliculosus])

HSP 1 Score: 228.024 bits (580), Expect = 3.184e-64
Identity = 166/558 (29.75%), Postives = 268/558 (48.03%), Query Frame = 0
Query:    6 KTFVTRLHGAVR-AERPNEERIQEVYQESEEVAKE--FNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPV-MEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPATDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSAQQSL---------DFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLA 550
            K FV  LH A+R A+R +E  ++ +Y  + +   +  F    WP+AE ++     D +FL  Y E+  +  F   N++  M D + SW+NY  LF AL+                   +IT +WAFD+++EFVYQFQ  CQ +    +   +E EL+      D W V  V  +LH L+KVS +  +LE           +   A  V +   PS+LH + GYFA+VG++RL+CLLGD+   + V E + + +   + AG       +++A V++H H GL++LM+++Y +A +             E++    RA +  Q Q+ G   + P          K  DK+ A++ I   L PG  I E ++  +  +  +DKL  +  GD      LF  ++PKF+                          G R   +  +Q  +F EEV+Q +   ++R YL+LY+TIGLEK++ F   + E    +LV  KHKL Q++   G S   SL         DF+++++   V +D  +   +Q   K+F  +I K EN+ 
Sbjct:   48 KDFVFDLHDAMRRAKRVDE--LEPLYNTTFKAVTDAYFKGSTWPEAEVIANQCSNDELFLCFYRELRNRHMFATTNVQ--MPDYLRSWENYCRLFDALLD------------CRDTNFVITEEWAFDLVHEFVYQFQSFCQMKGQR-RGGESEEELE------DAWAVQNVIGYLHGLIKVSNIMPILE----------AKKRPAANVAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNELFAG-------NMLAFVTVHQHAGLAFLMLKRYKDAARILS----------EALVHVGRANRSGQLQRSGYQDEVP----------KTADKMMALMAIATSLAPGAKIDEQMQSKMQ-DTHRDKLAKMAKGDDQAFRDLFSWASPKFVCSV-----------------------GSR--EFYEMQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDEEQFSAQLVSMKHKLTQMD--WGMSGDTSLLEGKPSFAMDFNFFVEDKTVVIDEADAREQQGYEKYFMSQIAKCENVT 517          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|291233684|ref|XP_002736781.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit L [Saccoglossus kowalevskii])

HSP 1 Score: 227.639 bits (579), Expect = 8.244e-64
Identity = 161/558 (28.85%), Postives = 264/558 (47.31%), Query Frame = 0
Query:    6 KTFVTRLHGAVRAERPNEERIQEVYQESEEVAKE--FNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISP-ATDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSA-----QQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLRK 555
            K F+   H  +     N   +  +Y+ S     E  F N PWP+AE V+ +V  D +F++LY E+ ++  +       T E R  S+ NY  LF  ++  +               + +  +W +DII EF+YQFQ   QYR+  ++ +  E E+  +     +W V  V N LH LV  S + + LEV + S+G  +   G  G  P       L+ +LGYF+L+GL RL  LLGD+   + V E +    +SV++            Q++ +Y++G +Y+M+R+Y +AI++F ++L     Y++  KQ  + +  Q                      K+ D++  +L I   L P + I E++   L  EK  DK+  +Q GD       F  + PKFISP A +YDA  +++    Q  T              LQ  VF EEV Q + +  +R +L+LY+T+ + KL+ F     ++ R  L+ +KHK+  L  + G+S      Q + +  +Y+D DM+H+   +   R      F  +I K E L   L+K
Sbjct:   63 KNFIHFFHKCINEG--NLFEVNNLYESSFNKLTERFFKNSPWPEAEHVAPVVDRDPLFVILYKELYYRHIYAKVTGGPTQEQRFESYYNYCNLFNYILNADG-----------PVPLELPNQWLWDIIDEFIYQFQSFSQYRSKLIKKS--EDEINVLRQSPKIWNVHSVLNVLHSLVDKSNINQQLEVYA-SEGDPDSVAGEFGRHP-------LYKMLGYFSLIGLLRLHSLLGDYYQGIKVLENIELNKKSVYSRVP-------ACQITTYYYVGFAYMMMRRYQDAIRSFANIL----LYIQRTKQMFQTKSYQYD-----------------MIMKMNDQMYTLLTICLTLHPMR-IDESVHSQLR-EKCGDKMLRMQKGDRQVFEDCFSFACPKFISPVAPNYDAPRNNL--QKQPFT--------------LQLKVFMEEVNQQIMIPTIRSFLKLYTTMPISKLATFLELNDDDFRNHLLCFKHKMKNLVWTKGTSGLEGEFQSASEVDFYIDQDMIHIADTKVARR--YGDFFIRQIHKFEELRHNLKK 549          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|1207938555|ref|XP_021358845.1| (eukaryotic translation initiation factor 3 subunit L-like [Mizuhopecten yessoensis])

HSP 1 Score: 226.868 bits (577), Expect = 1.287e-63
Identity = 168/559 (30.05%), Postives = 261/559 (46.69%), Query Frame = 0
Query:    6 KTFVTRLHGAVRAERPNEERIQEVYQE--SEEVAKEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQ--QQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPAT-DYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSA-----QQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLR 554
            K+F    H +V  +  N   IQ  Y+   ++   K F   PWP AE V+ +V  D +FL+LY E+ ++  +       ++E R  S+ NY  LF  ++  E               + +  +W +DII EF+YQFQ    YR     S  +E E+  +  +  +W V  V N LH LV+ S +   LEV + S G  +   G  G          L+ +LGYF+L+GL RL  LLGD+  AL   E +    +++++            Q++  Y++G +YLM+R+Y +AI+TF ++L     Y++  KQ  Q RAQ   Q                     K+ DK+  +L I   L P + I E++   L  EK  DK+  +Q GD +E    F  + PKF+SP   +YD  A                G        LQ  VF EEVRQ + L  +R YL+LY+T+ L KL+ F     + +R  L+ +KHK+  L  + G+S      Q + +  +Y+D DM+H+   +   R      F  +I K E + + L+
Sbjct:   48 KSFFEYFHKSVHEQ--NIFEIQNAYENGFNKLTDKFFKTSPWPDAEVVAPIVGNDTIFLILYKELYYRHIYARVQNGPSLEQRFESYYNYCNLFNYILNAEGP-----------VPLELPNQWLWDIIDEFIYQFQCFSIYRCKV--SKKSEEEIAYLRANPKIWNVHSVLNVLHSLVEKSSINRQLEVYT-SGGDPDSVAGEFGQ-------HSLYKMLGYFSLIGLLRLHSLLGDYYQALKCLECIDFNKKNMYSRVP-------ACQITTFYYVGFAYLMMRRYQDAIRTFSNIL----LYIQRTKQMFQTRAQLYDQ-------------------ISKMNDKMYTLLSISLVLHPMR-IDESVHSQLR-EKFADKMLRMQKGDQEEFQQNFSFACPKFLSPVPPNYDTIA----------------GINHKEPFSLQLKVFLEEVRQQIVLPTIRSYLKLYTTLPLSKLAIFMDMSEDELRTHLMCFKHKMKNLVWTKGTSGLDGEFQSASEVDFYIDKDMIHIADTKVARR--YGDFFIRQIHKFEEITKNLK 533          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|1005465143|ref|XP_015769580.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Acropora digitifera])

HSP 1 Score: 224.942 bits (572), Expect = 2.617e-63
Identity = 156/541 (28.84%), Postives = 269/541 (49.72%), Query Frame = 0
Query:   22 NEERIQEVYQE--SEEVAKEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPAT-DYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSA-----QQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLR 554
            N   IQ +Y+   ++   + +   PWP+A+ V+++V  D+VFL+LY E+ ++  + NK +K T++ R  S+ NY  LF  ++  +    ++           +  +W +DII EF+YQFQ   QYR+  L+    E E+ T+  +  +W V  V N L+ LV+ S++   LEV + + G  +   G  G  PL       + +LGYF+L+GL RL  LLGD+  A+ V E V    +S+++            Q++ +Y++G +YLM+++Y +AI++F ++L     Y++  K   + +  Q ++                   K  +++  +L I   LCP Q I EN+   L  E+  D+++ +Q GD+      F  + PKFISP   ++DA  ++                       LQ  VF  EV Q   +  +R YL+LY+T+ + KL+AF   +    R EL+ +KHK   L  + G+ A     Q S +  +Y+D DM+H+   + E R      F  +I K E + ++++
Sbjct:   18 NLYEIQSIYETGFNKLTERHYEKSPWPEADYVASIVDGDQVFLILYKELYYRHIY-NK-LKPTLDQRFESYFNYCDLFNYILNTDEPVPLS-----------LPNQWLWDIIDEFIYQFQSFSQYRSKLLKKG--EDEVATLRANTKIWNVHSVLNVLYSLVEKSRINYQLEVYN-TGGDPDTVAGHFGIRPL-------YKMLGYFSLIGLLRLHSLLGDYFQAIKVLENVELNKKSLYSRVP-------ACQITTYYYVGFAYLMMKRYQDAIRSFSNIL----LYIQRTKNMFQTKSYQYEE-----------------ITKKTEQMYILLAICLTLCP-QRIDENVLSQLR-ERCSDRIQRLQRGDLQTFEEGFSYACPKFISPVPPNFDAPPANFSREP----------------FNLQLKVFLNEVSQQSLIPVIRSYLKLYTTMPIAKLAAFLDMDENQFRTELLCFKHKQRNLVWTKGTDALEGELQSSSEVDFYIDQDMIHIADTKVERR--YGDFFIRQIHKFEEVNKSIQ 487          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|221114257|ref|XP_002156786.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Hydra vulgaris])

HSP 1 Score: 224.172 bits (570), Expect = 7.394e-63
Identity = 160/543 (29.47%), Postives = 269/543 (49.54%), Query Frame = 0
Query:   22 NEERIQEVYQESEEVAKE--FNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDH-KDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISP-ATDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSA-----QQSLDFHYYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTLRK 555
            N   IQ++Y E      E  F    WP+AE++S LV  D++FL LY E+ ++  +    +K TME R  S+ NY  LF  ++ + A   +           ++  +W +DII EF+YQFQ  CQ+RA  +     E E+ ++ ++   VW V  V N L+ LV+ S++ E LEV   +    +   G  G +PL       + +LGYF+L+GL RL  LLGD+  A+ V   V    +S+++            QV+ +Y++G +Y+M+R+Y +AI++FVSVL     Y++  KQ  + +  Q +Q                   K  +++  ++ I   LCP Q I E+I  +L  EKM DK+  +Q GD       F  S PKFISP   +YD++ ++  +                    LQ  +F  EV+Q   +  +R YL+LY+T+ L KL++ +  +   ++  L+ +KHK   L  + G+ A     Q S +  +++  DM+H+   + +  +     F  +I K++   +++ K
Sbjct:   36 NVYEIQQIYDEGFNKLTEQYFMKSAWPEAEDISPLVDGDKLFLTLYKELYYRHIYSK--LKPTMEHRYASYYNYCELFNYILDETAPSTL-----------VLPNQWMWDIIDEFIYQFQAFCQFRAKIMNKT--EDEMISLKENVYKVWNVHSVLNVLYCLVETSRINEQLEVFG-NDEDPDTVAGEYGKLPL-------YKMLGYFSLIGLLRLHSLLGDYYQAIKVLGNVDLNKKSLYSRVP-------ACQVTTYYYVGFAYMMMRRYEDAIRSFVSVL----SYVQRAKQVIQTKSYQFEQ-----------------IKKKTEQMYTLVCICLVLCP-QRIDESINQYLR-EKMLDKMLKMQKGDTSVFEECFSYSCPKFISPIPPNYDSSPANSHLDP----------------FNLQLRMFMVEVQQQSIIPVIRSYLKLYTTMSLSKLASLSELDEGTLQTALLCFKHKQRTLVWTKGNDALNGEFQSSPETDFFIGNDMIHI--ADTKVARRYGDFFIRQILKIDEFTKSMWK 507          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|1205898620|gb|OWF47808.1| (Eukaryotic translation initiation factor 3 subunit L [Mizuhopecten yessoensis])

HSP 1 Score: 223.402 bits (568), Expect = 5.033e-62
Identity = 162/529 (30.62%), Postives = 252/529 (47.64%), Query Frame = 0
Query:    6 KTFVTRLHGAVRAERPNEERIQEVYQE--SEEVAKEFNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQ--QQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPAT-DYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSA-----QQSLDFHYYLDGDMVHV 524
            K+F    H +V  +  N   IQ  Y+   ++   K F   PWP AE V+ +V  D +FL+LY E+ ++  +       ++E R  S+ NY  LF  ++  E               + +  +W +DII EF+YQFQ    YR     S  +E E+  +  +  +W V  V N LH LV+ S +   LEV + S G  +   G  G          L+ +LGYF+L+GL RL  LLGD+  AL   E +    +++++            Q++  Y++G +YLM+R+Y +AI+TF ++L     Y++  KQ  Q RAQ   Q                     K+ DK+  +L I   L P + I E++   L  EK  DK+  +Q GD +E    F  + PKF+SP   +YD  A   G+  +                 LQ  VF EEVRQ + L  +R YL+LY+T+ L KL+ F     + +R  L+ +KHK+  L  + G+S      Q + +  +Y+D DM+H+
Sbjct:   48 KSFFEYFHKSVHEQ--NIFEIQNAYENGFNKLTDKFFKTSPWPDAEVVAPIVGNDTIFLILYKELYYRHIYARVQNGPSLEQRFESYYNYCNLFNYILNAEGP-----------VPLELPNQWLWDIIDEFIYQFQCFSIYRCKV--SKKSEEEIAYLRANPKIWNVHSVLNVLHSLVEKSSINRQLEVYT-SGGDPDSVAGEFGQ-------HSLYKMLGYFSLIGLLRLHSLLGDYYQALKCLECIDFNKKNMYSRVP-------ACQITTFYYVGFAYLMMRRYQDAIRTFSNIL----LYIQRTKQMFQTRAQLYDQ-------------------ISKMNDKMYTLLSISLVLHPMR-IDESVHSQLR-EKFADKMLRMQKGDQEEFQQNFSFACPKFLSPVPPNYDTIA---GINHKEPFS-------------LQLKVFLEEVRQQIVLPTIRSYLKLYTTLPLSKLAIFMDMSEDELRTHLMCFKHKMKNLVWTKGTSGLDGEFQSASEVDFYIDKDMIHI 505          
BLAST of EWM23936.1 vs. NCBI_GenBank
Match: gi|957826592|ref|XP_014663117.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Priapulus caudatus])

HSP 1 Score: 223.016 bits (567), Expect = 5.290e-62
Identity = 154/521 (29.56%), Postives = 256/521 (49.14%), Query Frame = 0
Query:   40 FNNDPWPKAEEVSALVQEDRVFLLLYTEMAFQAFFKNKNMKATMEDRVGSWQNYSALFTALIQDEAGDAMTEAARAHGAEVMITGKWAFDIIYEFVYQFQEACQYRASALQSAINESELQTVLDHKDVWTVDKVFNFLHQLVKVSKVREVLEVASLSKGSAEGEGGGAGAVPLVTYPSKLHYLLGYFALVGLNRLECLLGDFQNALSVAEPVMEESRSVHAGAGLLLSSSIIAQVSLHYHIGLSYLMIRKYHEAIKTFVSVLDVYFKYMESVKQQQRAQQQQQQQQQGQPVQPPPKNADDLAAGKLVDKVAAMLLIVHHLCPGQHIPENIRGHLTGEKMKDKLRHVQSGDVDEIVTLFVVSAPKFISPA-TDYDAAASSMGVGGQVGTGRGGSGGRTGTYGGLQRIVFAEEVRQMLELRKLRDYLRLYSTIGLEKLSAFTGQEPENIRRELVQYKHKLLQLEASTGSSAQQSLDFH------YYLDGDMVHVDAGEHENRQEVSKHFQHEIRKLENLARTL 553
            F N+PWP++E ++ +V +D +F++LY E+ ++  +       + E R  S+ NY  LF  ++    G    E          +  +W +DI  EF+YQFQ   QYR  A+ +  ++ E++ +  +  +W V  V N LH LV  S +   LEV +         GG   +V        L+ +LGYF+L+GL RL  LLGD+  A+ V E +    +S+++            Q++ +Y++G +Y+M+R+Y +AI+TF +VL +Y          QR +Q   Q+   Q  Q   +N         + ++ AM L++H +     I E++   L  EK+ DK+  +Q GD+ EI   F  +APKF+SP   +YDAA ++      +                 Q  V  +EV+Q   L  +R YL+LY+T+ + KL+AF     + +R  L+ +KHK+  L    G+S  +  +FH      +Y+D +M+H+   +   R      F  +I K E L R L
Sbjct:  105 FKNEPWPQSEYIAPIVNDDPLFIILYKELYYRHIYAKVKDGPSQEQRFESYYNYCNLFNCILSASEGPIPLE----------LPNQWLWDITDEFIYQFQSFSQYR--AMLTKKSKDEIEILRRNPKIWNVHSVLNVLHSLVDKSNINRQLEVYT--------SGGDPDSVAEEFGRHSLYKMLGYFSLIGLLRLHSLLGDYYQAIKVLENIELNKQSMYSRVP-------ACQITTYYYVGFAYMMMRRYQDAIRTFSNVL-LYI---------QRTKQMNSQRSTAQYDQVSKQNEQ-------MCQLLAMCLVLHPM----RIDESVHSQLR-EKLGDKMLRMQKGDMTEIEQSFSFAAPKFLSPVPPNYDAAPANFHKEPHIQ----------------QLKVLVDEVQQQFLLATIRSYLKLYTTMPIVKLAAFLDMSEDELRTYLLCFKHKMKNLVWIKGTSGLEG-EFHSASEVDFYIDKNMIHIADTKVARR--YGDFFVRQILKFEELNRNL 557          
The following BLAST results are available for this feature:
BLAST of EWM23936.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105221|gb|EWM23936.1|0.000e+0100.00eukaryotic translation initiation factor 3 subunit... [more]
gi|1176106579|ref|XP_020624167.1|1.774e-6530.02eukaryotic translation initiation factor 3 subunit... [more]
gi|156375556|ref|XP_001630146.1|6.443e-6529.98predicted protein [Nematostella vectensis] >gi|224... [more]
gi|298711716|emb|CBJ32763.1|3.184e-6429.75Eukaryotic translation initiation factor 3 subunit... [more]
gi|291233684|ref|XP_002736781.1|8.244e-6428.85PREDICTED: eukaryotic translation initiation facto... [more]
gi|1207938555|ref|XP_021358845.1|1.287e-6330.05eukaryotic translation initiation factor 3 subunit... [more]
gi|1005465143|ref|XP_015769580.1|2.617e-6328.84PREDICTED: eukaryotic translation initiation facto... [more]
gi|221114257|ref|XP_002156786.1|7.394e-6329.47PREDICTED: eukaryotic translation initiation facto... [more]
gi|1205898620|gb|OWF47808.1|5.033e-6230.62Eukaryotic translation initiation factor 3 subunit... [more]
gi|957826592|ref|XP_014663117.1|5.290e-6229.56PREDICTED: eukaryotic translation initiation facto... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6760rna6760Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications