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Properties
| Property Name | Value |
|---|
| Product | T-complex 11 |
| Orig transcript id | gnl|cribi|Naga_100005g40.6720.mrna |
| Orig protein id | gnl|cribi|Naga_100005g40.6720 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:536650..540358 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5252 ID=rna5252|Name=rna5252|organism=Nannochloropsis gaditana|type=mRNA|length=615bp
ATGTCAAGTCGAGAAATGACTCAGCTCTCCATACTTCCATCTCCTTCCCA
GCACATTCGGAGAAAAGAGGAAAGCCCGTCCACATTTCACCGTGCTATGT
CGTTGACATGCACAGATGAAAATAAGACACGAGCATGGTTGCATAAAGCT
TCGATTATTTTTTCGAAAACTGGTATTTCTGAACCCCATCTTTTTTTCAA
GAAGCTCGAAAATAGTCTTCTCCTTGATGATCACTTAAACAATTTTAAAG
AGCAGTCTGAAATGAAATTAATGAGCTTGAAAATCGAAGGAACACAGCTC
AAGAGAAACCTTGAAGGAATAGATCGTGGTTCCTTAGGACTCAACATGAT
GAATTCCAAGCTTTTAGATGCACACAAGTCGATGTTAAAAGAGACAGATT
CTAATGCCGCACTGGAGCTTTCTAAACACGACTACCGATTTATCCACGAG
AAAGTGGCAGAAAGCATTATCAAAGGAGACCAGGCAAAAGAAGGTCTCGA
GCATCTAGCAGAGCTTTTAAGAATCATTAAGAGGGAAGAAAAATGGGAAA
TAGAAGACATCTTTGCGCACATTCAGATGAAATTAGAAGAGATAAAGCCT
GAGCAATTAGCATGA back to topprotein sequence of rna5252 >rna5252-protein ID=rna5252-protein|Name=rna5252|organism=Nannochloropsis gaditana|type=polypeptide|length=976bp
MSAEDKQGRRCGLTCTDLTSPSTPKRSPSSITGQHKLQKAARIVQMWWRR
YRAIGKIAVYLTTQASQLRQANEVLMLKSSTGFEDVLSKIRDKNIIASIA
CLLNAVSIQGPDKKRGSPGMEDSQQFFHRVQEQQARKILTAVMIKLHPGD
VITTDPYTCSKDHGEEMGMAELEAQLVCIAANLVLDSASCLINMLGDLET
GYTPFRRKAGALGLLRLRLNTLNFARTFMNASLTTLQNRQARSISLSFLT
SYVEAYRNFKDAQRVGEEGLIEAARHSLHKVHVGICQVLGRELAEKHCRS
VEEGMDTGRKNVVLMPWGMTVALPPMRMSSLSKAQIPSSSNDLAMVGLKS
TSGNSYDISPGLGPEKRKSSTLPPRSEGGNENISTARRLMATTNSDAKAV
ENPPSAITQPTTAAKFEAETEDGETSIDTQPSSTMLLNEKLAHEIILNPT
FSISEEKASMSAVRGEFGNEDLGHIRDTMEEIFWDRLVEAMTPPLQEGPS
DFTSGSIAQIRFGSGQGSLFACKVEAVNEDETVDIEYLVDGVKERRPIHQ
FRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQM
ALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMS
ASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHG
VEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAH
RNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAV
YSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSC
LMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERI
SAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHG
DVYSKILRDEASILLCEKDHGNSSLM back to topmRNA from alignment at CM002465.1:536650..540358- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5252 ID=rna5252|Name=rna5252|organism=Nannochloropsis gaditana|type=mRNA|length=3709bp|location=Sequence derived from alignment at CM002465.1:536650..540358- (Nannochloropsis gaditana)
CGGCACAAGATCTAGGTAAGAGCCGTCTAACAACTTGACAGATAATGGTC
GCGATACGGAGACATAATGTTTGGCACGCAACTCTGCAATTTTTCACAAT
GGATCATAGTATTGTAGTGCTGTACAAAAATGTTTCCTCTTCTTGTTTCC
CGGTGTCATTTAGGCCTTGTATATCGATTTTGGTTCAAAAAAGGGGAGAA
AACTACATGACGTGGGAAGAATGTTATATTTTAAAACCATCTAATCAACT
GCATGGTTTTCTTCTACACAGTCATTTGATATCTTTGTCTTGTCTTTTGA
CGTTCTGTGCACACTCGATTAGGAGGGGCAGAATATGTCCGCTGAAGACA
AGCAAGGACGAAGATGTGGCTTGACGTGCACTGACCTCACGTCGCCATCG
ACACCAAAGCGCTCTCCAAGTTCGATCACTGGGCAGCACAAATTGCAAAA
AGCTGCTAGAATTGTGCAGATGTGGTGGCGAAGATATCGTGCGATCGGTA
AAATAGCTGTTTACCTAACCACGCAAGCCTCTCAATTAAGACAGGCTAAT
GAGGTATTGATGCTGAAATCAAGTACCGGATTTGAGGACGTCCTTAGCAA
GATCAGAGACAAAAATATTATAGCGAGCATCGCATGTCTCTTGAATGCCG
TGTCAATCCAGGGGCCTGACAAAAAGAGGGGCTCCCCTGGGATGGAAGAC
TCACAACAGTTCTTCCATCGGGTTCAGGAGCAGCAGGCGCGCAAAATTTT
GACCGCAGTTATGATCAAATTGCATCCTGGAGATGTCATAACGACAGATC
CATATACGTGCAGCAAAGACCATGGTGAAGAAATGGGTATGGCGGAGTTG
GAAGCCCAACTCGTATGCATTGCCGCAAATCTGGTTTTGGATTCAGCGAG
CTGCCTCATAAACATGCTGGGTGACCTGGAGACAGGTTACACACCATTTC
GACGCAAAGCAGGAGCTTTGGGCCTACTTCGTCTCCGACTCAACACTCTC
AACTTTGCACGTACATTTATGAACGCATCCTTGACCACGCTGCAAAATCG
CCAGGCGCGCAGTATTTCTTTATCTTTTTTGACCTCGTATGTGGAAGCAT
ACCGGAATTTTAAAGATGCACAGCGCGTTGGAGAGGAAGGGCTTATTGAA
GCAGCACGGCATAGCCTACATAAGGTTCATGTGGGCATATGCCAAGTGCT
GGGGCGAGAGCTTGCGGAGAAACACTGCCGAAGCGTAGAAGAGGGCATGG
ACACGGGACGAAAGAATGTTGTGCTGATGCCTTGGGGCATGACTGTAGCA
TTGCCGCCTATGAGAATGTCGAGCCTTTCTAAGGCTCAAATACCCTCCTC
TTCTAATGATTTGGCTATGGTAGGATTGAAAAGTACCAGTGGAAACAGCT
ATGACATTTCTCCAGGCCTGGGCCCGGAAAAAAGAAAAAGTTCTACCTTG
CCTCCGAGATCTGAAGGTGGTAATGAAAATATCAGCACCGCCAGGAGGCT
GATGGCCACCACAAATTCCGACGCGAAGGCTGTGGAAAATCCCCCCAGCG
CTATTACGCAACCTACGACGGCCGCAAAATTTGAGGCTGAAACAGAGGAC
GGAGAAACTTCGATCGACACTCAGCCCTCATCCACAATGCTGCTGAATGA
AAAACTGGCCCATGAAATCATACTTAACCCAACATTTTCAATCAGCGAGG
AGAAAGCGTCAATGTCCGCAGTCAGAGGAGAATTTGGGAATGAAGACCTC
GGACACATACGCGACACTATGGAGGAGATCTTTTGGGATCGCTTGGTAGA
AGCCATGACACCTCCCCTGCAAGAAGGCCCAAGCGATTTTACAAGCGGTT
CGATAGCGCAGATCCGCTTTGGAAGCGGACAGGGCTCACTTTTTGCATGC
AAAGTTGAAGCAGTAAATGAAGATGAAACCGTCGACATAGAGTATTTGGT
TGATGGCGTCAAAGAACGACGGCCGATCCATCAATTTCGTTTGAAAGACG
ATCCATTGGAATACGAGCCATTCCTGGCACTTGTAGATGAAGTGCGGGAG
AAACTGACGAGTTTGACACCTCGACGTATCGACCTGGCGGAGGAGCTGCG
AGCCCACTTAGACAAAAAACTCTTGAGCCAAATGGCTCTTCAAGGTCTCC
TGGATGCACCCGCGATCTACAAGTTGTTAAAGTACATATTTGATCATCTC
ATGGCGCTTCAGGCTCCTGTTAGGGTTGCAGAGACGATGTCTTGGATTTC
GGGCTTTGAGAAGGAAGTACATGCATCCATGTCTGCATCGCAGCATGCCA
AGTATATCCCGTCGGCCTTCGTTGCGTTGCTCCCTCGCGTGTTTCGAGGT
ATTTTTGCACGTATAGATGAGACACAACGGGACATTGCTGACGCTCACAT
ACAAATGCTTCGACCTTATCTGGTTCAACATGGCGTTGAATACGAACGAG
AAAAATTTGCCGCGCGTTTTCTAACCGGTCAATGGAGGCTTTTAAATACT
GAAGCATGGCTCAAAAAGGTATTAGCAAGTCCAGAAAACGCGTCGCACTT
ATCTTCAATCGCTCAAGGCGATGCAATGGCTCATCGCAACTTATTGTCTA
GAGCAATGAAATGTCTCTTGCAACAACCAGTACGCATTGAAATCTGTAGT
AACCTTCCCGAGACGCTACGCTATGACGGATTACGTATGACAAAATTTCG
GGACGAGCAGGATAGAATCACGCTTGTTGCGGTCTATTCTTCTTTATTGC
GTCAGTTTTTAAGTGTACAATGTCCCTCATTGAATTCTCATCAATCCGAA
TGTATGGGATCCACCATTCTTGCACTGGAGACCAGGTTGTACGTTCTTTT
ACAAGGAGTCGGAAATACCGTTCTGCTTTCTTGTTTAATGGAGGAGGTGC
TTGAATGTGCGAGACAGATCTGCAAAAAAGAGGAAGCAGTCTTCAGCGGG
GCTCAAGCCTCCATTTTGCAAGGAATGCTTCACAATGCTGCAAAACCAAA
AAGTCCTTTGTTTGACTTGGTTTCAGAGCGCATATCCGCGGTCACAAATC
TATATATGTGCGGGGAAGCCCAAAATGCTCATAAGGCCATGACTTGTTTT
GGTCTTGCATCATTTCAATCAAAGTTGGAGGTCACAGGTTATGGCTTGCA
TCGTTTATTCATGCATAATCTAGCCGTACACGGTGATGTATATTCTAAAA
TTCTTCGCGACGAAGCTTCAATTTTATTATGCGAAAAAGATCATGGAAAC
TCCAGCCTGATGTGACATTCCTGTATTCCATTGTGCAATCACGATCATTT
CGACGTGAAACTTCAAATGTACATCCCACTTTTCTAGAAATTGTCATGAA
GTTTTCGTATTTAAGAAACATTTTTTCCTCTCCTGTTTTAGGCAGTTTGA
CACGTTTCATACATGAAAGAAACCTCTAGAGCAGATACCTTCGAAAATTC
TGCTCCCGTGCCGGATGTAATCTCGAAGAATCCAATGAAAGCAACGGGAC
GCATTTCTATTTCTTCTCTACTAATAGAACAAATACAACAGGAAGTCAGG
ATTGGGCTTTTAAAGATGTTTAAAGTATTTTCCGGCCTTTTCATGATTGA
ACACCATACCATGGATACATGAGAATAAATTCGGAAGTGCGAAATATACC
TGCCAAAATCATCTACAAAGAGCATTATGTTCGAAATGTGAGAATGTGAA
CGAGTTGTG back to topCoding sequence (CDS) from alignment at CM002465.1:536650..540358- >rna5252 ID=rna5252|Name=rna5252|organism=Nannochloropsis gaditana|type=CDS|length=2931bp|location=Sequence derived from alignment at CM002465.1:536650..540358- (Nannochloropsis gaditana)
ATGTCCGCTGAAGACAAGCAAGGACGAAGATGTGGCTTGACGTGCACTGA
CCTCACGTCGCCATCGACACCAAAGCGCTCTCCAAGTTCGATCACTGGGC
AGCACAAATTGCAAAAAGCTGCTAGAATTGTGCAGATGTGGTGGCGAAGA
TATCGTGCGATCGGTAAAATAGCTGTTTACCTAACCACGCAAGCCTCTCA
ATTAAGACAGGCTAATGAGGTATTGATGCTGAAATCAAGTACCGGATTTG
AGGACGTCCTTAGCAAGATCAGAGACAAAAATATTATAGCGAGCATCGCA
TGTCTCTTGAATGCCGTGTCAATCCAGGGGCCTGACAAAAAGAGGGGCTC
CCCTGGGATGGAAGACTCACAACAGTTCTTCCATCGGGTTCAGGAGCAGC
AGGCGCGCAAAATTTTGACCGCAGTTATGATCAAATTGCATCCTGGAGAT
GTCATAACGACAGATCCATATACGTGCAGCAAAGACCATGGTGAAGAAAT
GGGTATGGCGGAGTTGGAAGCCCAACTCGTATGCATTGCCGCAAATCTGG
TTTTGGATTCAGCGAGCTGCCTCATAAACATGCTGGGTGACCTGGAGACA
GGTTACACACCATTTCGACGCAAAGCAGGAGCTTTGGGCCTACTTCGTCT
CCGACTCAACACTCTCAACTTTGCACGTACATTTATGAACGCATCCTTGA
CCACGCTGCAAAATCGCCAGGCGCGCAGTATTTCTTTATCTTTTTTGACC
TCGTATGTGGAAGCATACCGGAATTTTAAAGATGCACAGCGCGTTGGAGA
GGAAGGGCTTATTGAAGCAGCACGGCATAGCCTACATAAGGTTCATGTGG
GCATATGCCAAGTGCTGGGGCGAGAGCTTGCGGAGAAACACTGCCGAAGC
GTAGAAGAGGGCATGGACACGGGACGAAAGAATGTTGTGCTGATGCCTTG
GGGCATGACTGTAGCATTGCCGCCTATGAGAATGTCGAGCCTTTCTAAGG
CTCAAATACCCTCCTCTTCTAATGATTTGGCTATGGTAGGATTGAAAAGT
ACCAGTGGAAACAGCTATGACATTTCTCCAGGCCTGGGCCCGGAAAAAAG
AAAAAGTTCTACCTTGCCTCCGAGATCTGAAGGTGGTAATGAAAATATCA
GCACCGCCAGGAGGCTGATGGCCACCACAAATTCCGACGCGAAGGCTGTG
GAAAATCCCCCCAGCGCTATTACGCAACCTACGACGGCCGCAAAATTTGA
GGCTGAAACAGAGGACGGAGAAACTTCGATCGACACTCAGCCCTCATCCA
CAATGCTGCTGAATGAAAAACTGGCCCATGAAATCATACTTAACCCAACA
TTTTCAATCAGCGAGGAGAAAGCGTCAATGTCCGCAGTCAGAGGAGAATT
TGGGAATGAAGACCTCGGACACATACGCGACACTATGGAGGAGATCTTTT
GGGATCGCTTGGTAGAAGCCATGACACCTCCCCTGCAAGAAGGCCCAAGC
GATTTTACAAGCGGTTCGATAGCGCAGATCCGCTTTGGAAGCGGACAGGG
CTCACTTTTTGCATGCAAAGTTGAAGCAGTAAATGAAGATGAAACCGTCG
ACATAGAGTATTTGGTTGATGGCGTCAAAGAACGACGGCCGATCCATCAA
TTTCGTTTGAAAGACGATCCATTGGAATACGAGCCATTCCTGGCACTTGT
AGATGAAGTGCGGGAGAAACTGACGAGTTTGACACCTCGACGTATCGACC
TGGCGGAGGAGCTGCGAGCCCACTTAGACAAAAAACTCTTGAGCCAAATG
GCTCTTCAAGGTCTCCTGGATGCACCCGCGATCTACAAGTTGTTAAAGTA
CATATTTGATCATCTCATGGCGCTTCAGGCTCCTGTTAGGGTTGCAGAGA
CGATGTCTTGGATTTCGGGCTTTGAGAAGGAAGTACATGCATCCATGTCT
GCATCGCAGCATGCCAAGTATATCCCGTCGGCCTTCGTTGCGTTGCTCCC
TCGCGTGTTTCGAGGTATTTTTGCACGTATAGATGAGACACAACGGGACA
TTGCTGACGCTCACATACAAATGCTTCGACCTTATCTGGTTCAACATGGC
GTTGAATACGAACGAGAAAAATTTGCCGCGCGTTTTCTAACCGGTCAATG
GAGGCTTTTAAATACTGAAGCATGGCTCAAAAAGGTATTAGCAAGTCCAG
AAAACGCGTCGCACTTATCTTCAATCGCTCAAGGCGATGCAATGGCTCAT
CGCAACTTATTGTCTAGAGCAATGAAATGTCTCTTGCAACAACCAGTACG
CATTGAAATCTGTAGTAACCTTCCCGAGACGCTACGCTATGACGGATTAC
GTATGACAAAATTTCGGGACGAGCAGGATAGAATCACGCTTGTTGCGGTC
TATTCTTCTTTATTGCGTCAGTTTTTAAGTGTACAATGTCCCTCATTGAA
TTCTCATCAATCCGAATGTATGGGATCCACCATTCTTGCACTGGAGACCA
GGTTGTACGTTCTTTTACAAGGAGTCGGAAATACCGTTCTGCTTTCTTGT
TTAATGGAGGAGGTGCTTGAATGTGCGAGACAGATCTGCAAAAAAGAGGA
AGCAGTCTTCAGCGGGGCTCAAGCCTCCATTTTGCAAGGAATGCTTCACA
ATGCTGCAAAACCAAAAAGTCCTTTGTTTGACTTGGTTTCAGAGCGCATA
TCCGCGGTCACAAATCTATATATGTGCGGGGAAGCCCAAAATGCTCATAA
GGCCATGACTTGTTTTGGTCTTGCATCATTTCAATCAAAGTTGGAGGTCA
CAGGTTATGGCTTGCATCGTTTATTCATGCATAATCTAGCCGTACACGGT
GATGTATATTCTAAAATTCTTCGCGACGAAGCTTCAATTTTATTATGCGA
AAAAGATCATGGAAACTCCAGCCTGATGTGA back to top
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