Naga_100005g40, gene5072 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g40
Unique Namegene5072
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:536650..540358 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g40
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:536650..540358 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02130NO10G02130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5252rna5252-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5252rna5252Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5252

>rna5252-protein ID=rna5252-protein|Name=rna5252|organism=Nannochloropsis gaditana|type=polypeptide|length=976bp
MSAEDKQGRRCGLTCTDLTSPSTPKRSPSSITGQHKLQKAARIVQMWWRR
YRAIGKIAVYLTTQASQLRQANEVLMLKSSTGFEDVLSKIRDKNIIASIA
CLLNAVSIQGPDKKRGSPGMEDSQQFFHRVQEQQARKILTAVMIKLHPGD
VITTDPYTCSKDHGEEMGMAELEAQLVCIAANLVLDSASCLINMLGDLET
GYTPFRRKAGALGLLRLRLNTLNFARTFMNASLTTLQNRQARSISLSFLT
SYVEAYRNFKDAQRVGEEGLIEAARHSLHKVHVGICQVLGRELAEKHCRS
VEEGMDTGRKNVVLMPWGMTVALPPMRMSSLSKAQIPSSSNDLAMVGLKS
TSGNSYDISPGLGPEKRKSSTLPPRSEGGNENISTARRLMATTNSDAKAV
ENPPSAITQPTTAAKFEAETEDGETSIDTQPSSTMLLNEKLAHEIILNPT
FSISEEKASMSAVRGEFGNEDLGHIRDTMEEIFWDRLVEAMTPPLQEGPS
DFTSGSIAQIRFGSGQGSLFACKVEAVNEDETVDIEYLVDGVKERRPIHQ
FRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQM
ALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMS
ASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHG
VEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAH
RNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAV
YSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSC
LMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERI
SAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHG
DVYSKILRDEASILLCEKDHGNSSLM
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Synonyms
Publications