EWM25426.1, cds5239 (CDS) Nannochloropsis gaditana

Overview
NameEWM25426.1
Unique Namecds5239
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:537094..540024 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25426.1
ProductT-complex 11
Orig transcript idgnl|cribi|Naga_100005g40.6720.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:537094..540024 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008862Tcp11
Homology
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|585107187|gb|EWM25426.1| (T-complex 11 [Nannochloropsis gaditana])

HSP 1 Score: 2027.68 bits (5252), Expect = 0.000e+0
Identity = 976/976 (100.00%), Postives = 976/976 (100.00%), Query Frame = 0
Query:    1 MSAEDKQGRRCGLTCTDLTSPSTPKRSPSSITGQHKLQKAARIVQMWWRRYRAIGKIAVYLTTQASQLRQANEVLMLKSSTGFEDVLSKIRDKNIIASIACLLNAVSIQGPDKKRGSPGMEDSQQFFHRVQEQQARKILTAVMIKLHPGDVITTDPYTCSKDHGEEMGMAELEAQLVCIAANLVLDSASCLINMLGDLETGYTPFRRKAGALGLLRLRLNTLNFARTFMNASLTTLQNRQARSISLSFLTSYVEAYRNFKDAQRVGEEGLIEAARHSLHKVHVGICQVLGRELAEKHCRSVEEGMDTGRKNVVLMPWGMTVALPPMRMSSLSKAQIPSSSNDLAMVGLKSTSGNSYDISPGLGPEKRKSSTLPPRSEGGNENISTARRLMATTNSDAKAVENPPSAITQPTTAAKFEAETEDGETSIDTQPSSTMLLNEKLAHEIILNPTFSISEEKASMSAVRGEFGNEDLGHIRDTMEEIFWDRLVEAMTPPLQEGPSDFTSGSIAQIRFGSGQGSLFACKVEAVNEDETVDIEYLVDGVKERRPIHQFRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRDEASILLCEKDHGNSSLM 976
            MSAEDKQGRRCGLTCTDLTSPSTPKRSPSSITGQHKLQKAARIVQMWWRRYRAIGKIAVYLTTQASQLRQANEVLMLKSSTGFEDVLSKIRDKNIIASIACLLNAVSIQGPDKKRGSPGMEDSQQFFHRVQEQQARKILTAVMIKLHPGDVITTDPYTCSKDHGEEMGMAELEAQLVCIAANLVLDSASCLINMLGDLETGYTPFRRKAGALGLLRLRLNTLNFARTFMNASLTTLQNRQARSISLSFLTSYVEAYRNFKDAQRVGEEGLIEAARHSLHKVHVGICQVLGRELAEKHCRSVEEGMDTGRKNVVLMPWGMTVALPPMRMSSLSKAQIPSSSNDLAMVGLKSTSGNSYDISPGLGPEKRKSSTLPPRSEGGNENISTARRLMATTNSDAKAVENPPSAITQPTTAAKFEAETEDGETSIDTQPSSTMLLNEKLAHEIILNPTFSISEEKASMSAVRGEFGNEDLGHIRDTMEEIFWDRLVEAMTPPLQEGPSDFTSGSIAQIRFGSGQGSLFACKVEAVNEDETVDIEYLVDGVKERRPIHQFRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRDEASILLCEKDHGNSSLM
Sbjct:    1 MSAEDKQGRRCGLTCTDLTSPSTPKRSPSSITGQHKLQKAARIVQMWWRRYRAIGKIAVYLTTQASQLRQANEVLMLKSSTGFEDVLSKIRDKNIIASIACLLNAVSIQGPDKKRGSPGMEDSQQFFHRVQEQQARKILTAVMIKLHPGDVITTDPYTCSKDHGEEMGMAELEAQLVCIAANLVLDSASCLINMLGDLETGYTPFRRKAGALGLLRLRLNTLNFARTFMNASLTTLQNRQARSISLSFLTSYVEAYRNFKDAQRVGEEGLIEAARHSLHKVHVGICQVLGRELAEKHCRSVEEGMDTGRKNVVLMPWGMTVALPPMRMSSLSKAQIPSSSNDLAMVGLKSTSGNSYDISPGLGPEKRKSSTLPPRSEGGNENISTARRLMATTNSDAKAVENPPSAITQPTTAAKFEAETEDGETSIDTQPSSTMLLNEKLAHEIILNPTFSISEEKASMSAVRGEFGNEDLGHIRDTMEEIFWDRLVEAMTPPLQEGPSDFTSGSIAQIRFGSGQGSLFACKVEAVNEDETVDIEYLVDGVKERRPIHQFRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRDEASILLCEKDHGNSSLM 976          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|553196590|ref|XP_005856379.1| (t-complex 11 like isoform cra b [Nannochloropsis gaditana CCMP526] >gi|422292680|gb|EKU19982.1| t-complex 11 like isoform cra b [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 2026.14 bits (5248), Expect = 0.000e+0
Identity = 975/976 (99.90%), Postives = 976/976 (100.00%), Query Frame = 0
Query:    1 MSAEDKQGRRCGLTCTDLTSPSTPKRSPSSITGQHKLQKAARIVQMWWRRYRAIGKIAVYLTTQASQLRQANEVLMLKSSTGFEDVLSKIRDKNIIASIACLLNAVSIQGPDKKRGSPGMEDSQQFFHRVQEQQARKILTAVMIKLHPGDVITTDPYTCSKDHGEEMGMAELEAQLVCIAANLVLDSASCLINMLGDLETGYTPFRRKAGALGLLRLRLNTLNFARTFMNASLTTLQNRQARSISLSFLTSYVEAYRNFKDAQRVGEEGLIEAARHSLHKVHVGICQVLGRELAEKHCRSVEEGMDTGRKNVVLMPWGMTVALPPMRMSSLSKAQIPSSSNDLAMVGLKSTSGNSYDISPGLGPEKRKSSTLPPRSEGGNENISTARRLMATTNSDAKAVENPPSAITQPTTAAKFEAETEDGETSIDTQPSSTMLLNEKLAHEIILNPTFSISEEKASMSAVRGEFGNEDLGHIRDTMEEIFWDRLVEAMTPPLQEGPSDFTSGSIAQIRFGSGQGSLFACKVEAVNEDETVDIEYLVDGVKERRPIHQFRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRDEASILLCEKDHGNSSLM 976
            MSAEDKQGRRCGLTCTDLTSPSTPKRSPSSITGQH+LQKAARIVQMWWRRYRAIGKIAVYLTTQASQLRQANEVLMLKSSTGFEDVLSKIRDKNIIASIACLLNAVSIQGPDKKRGSPGMEDSQQFFHRVQEQQARKILTAVMIKLHPGDVITTDPYTCSKDHGEEMGMAELEAQLVCIAANLVLDSASCLINMLGDLETGYTPFRRKAGALGLLRLRLNTLNFARTFMNASLTTLQNRQARSISLSFLTSYVEAYRNFKDAQRVGEEGLIEAARHSLHKVHVGICQVLGRELAEKHCRSVEEGMDTGRKNVVLMPWGMTVALPPMRMSSLSKAQIPSSSNDLAMVGLKSTSGNSYDISPGLGPEKRKSSTLPPRSEGGNENISTARRLMATTNSDAKAVENPPSAITQPTTAAKFEAETEDGETSIDTQPSSTMLLNEKLAHEIILNPTFSISEEKASMSAVRGEFGNEDLGHIRDTMEEIFWDRLVEAMTPPLQEGPSDFTSGSIAQIRFGSGQGSLFACKVEAVNEDETVDIEYLVDGVKERRPIHQFRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRDEASILLCEKDHGNSSLM
Sbjct:    1 MSAEDKQGRRCGLTCTDLTSPSTPKRSPSSITGQHRLQKAARIVQMWWRRYRAIGKIAVYLTTQASQLRQANEVLMLKSSTGFEDVLSKIRDKNIIASIACLLNAVSIQGPDKKRGSPGMEDSQQFFHRVQEQQARKILTAVMIKLHPGDVITTDPYTCSKDHGEEMGMAELEAQLVCIAANLVLDSASCLINMLGDLETGYTPFRRKAGALGLLRLRLNTLNFARTFMNASLTTLQNRQARSISLSFLTSYVEAYRNFKDAQRVGEEGLIEAARHSLHKVHVGICQVLGRELAEKHCRSVEEGMDTGRKNVVLMPWGMTVALPPMRMSSLSKAQIPSSSNDLAMVGLKSTSGNSYDISPGLGPEKRKSSTLPPRSEGGNENISTARRLMATTNSDAKAVENPPSAITQPTTAAKFEAETEDGETSIDTQPSSTMLLNEKLAHEIILNPTFSISEEKASMSAVRGEFGNEDLGHIRDTMEEIFWDRLVEAMTPPLQEGPSDFTSGSIAQIRFGSGQGSLFACKVEAVNEDETVDIEYLVDGVKERRPIHQFRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRDEASILLCEKDHGNSSLM 976          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|299471621|emb|CBN76843.1| (novel protein containing a T-complex protein 11 domain (zgc:73347) [Ectocarpus siliculosus])

HSP 1 Score: 242.662 bits (618), Expect = 1.353e-63
Identity = 188/634 (29.65%), Postives = 285/634 (44.95%), Query Frame = 0
Query:  435 MLLNEKLAHEIILNPTFSI----SEEKASMSAVRGEFGNEDLGH-IRDTMEEIFWDRLVEAMT----------------------------------------------PPLQEGPSDFTSGSIAQIRFGSGQGSLFACKVEAVNEDET------------------VDIEYLVDGVKERR-PIHQFRLKDDPLEYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVL--------------ASPENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRIE--------ICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLS---VQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVLECARQICKKEEAVFSGAQASI----------LQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCF--GLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRDEA 961
            +L NE+LAHEI++N  F I     ++  + +A       E+L    +D M  IFWDR  +++                                               PPL+       +GS    R+GS +GS +A  V AV                       VD+ Y  DG+ ER  P+ + +  DDP ++ P LAL+ EVRE+L SLTP    L  E+RA L ++ L++M     LDA  + +L+ +I   ++ LQAPVR     +W+ GF+  + A++++       P A + LLPRVF  +FA+++E +RD A+AHI+++ PYL +HG  YER KF AR   G   L  T+AWL   +                 E A     +  G    H+ +L  A   LL+  VR++            LPETL  DG R+   RD+ DR+TLVA    L+RQ L+   + CP+            + AL+ +   LL+  G  VLL  ++EE +  +R++         GA  S           L+ +L ++A P + +F +  +R+     L + G       A  C   G+ SF  +L   G  LHRLF HN+ V    Y  I+ + A
Sbjct:  301 LLGNEQLAHEILVNADFQIPAIEEDDPRNSTASSSSSPEEELARRFKDVMRRIFWDRFTQSLLPPPNPIPAAATSASSADAPAGAASHTATAAAEGEDGAEAVVHVTGLPPLR-------AGSKVHARYGSERGSYYAATVVAVGSSSDAACGVGGGQVGGERGGVFVDVRYDEDGMVERGVPVSRLKKLDDPPDFGPLLALLGEVREELVSLTPNNSVLVGEVRAVLSQERLAEMLRDKTLDARQVQRLVGFIAGRILNLQAPVRSDGARAWLKGFDASMEAAIASGD-----PLAIIPLLPRVFEFVFAQMEEIKRDTANAHIRLVAPYLARHGAPYERAKFEARLSRGDVSLERTKAWLSSAVQGFLGGDAGEGGTGDEGERARRAKGLRDGREELHKAVLQEAFTGLLRSTVRLDRPDAAAAAAGGVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLARLRIGCPA----------PAMAALQAKTSGLLKQQG--VLLPQIVEECVATSRRLASSASKEGGGAAESPPGLPPAEEEGLRSLLMSSADPNNEVFRVFFKRVL----LSLKGMVAGGDAADVCVRNGMQSFGEELRPVGARLHRLFAHNVKVFAGHYGPIVTEAA 906          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|299471356|emb|CBN79311.1| (t-complex 11 (mouse) like 2, isoform CRA_a (Partial), partial [Ectocarpus siliculosus])

HSP 1 Score: 110.923 bits (276), Expect = 5.076e-21
Identity = 60/186 (32.26%), Postives = 103/186 (55.38%), Query Frame = 0
Query:  559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGF---EKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSS 741
            +Y P L LV E+R+K+  LTPRR DLA E    +D +LL QM   G  D    ++++ +  + ++ L+AP+R  +T + ++G+   + EV          +  P    A++   F  +F++ DE   DI +AH+Q + P+L QHGVEYER++F  +   G+  L  T  WL + +    +A+ +++
Sbjct:  796 DYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGG-----RRRLEP----AMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGETSLDMTHLWLHRAIRQLRSAAGVAA 972          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|1028573413|gb|OAJ41717.1| (hypothetical protein BDEG_25273 [Batrachochytrium dendrobatidis JEL423])

HSP 1 Score: 107.842 bits (268), Expect = 4.312e-20
Identity = 103/408 (25.25%), Postives = 181/408 (44.36%), Query Frame = 0
Query:  566 LVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSI---AQGDAMAHR-NLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEV-LECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSER---------ISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRD 959
            L+ EVR  L  L P   D+  E+ A++D KL++Q    G+++      L++YI   +    AP+R           ++ V + ++A +   ++         +  R  F  ++  + D A+  +  LRPY+++H  E+E + F  ++ +G   L  T +WL+ V  SP  A+ LS+       D   H+ ++++ A   L+ Q  +      +PETL+ D  RM  F ++   IT++   SSLL  F     P   SH  E         +  L+VLL     T      M  + L+ A    K  E  F+  +  ++  M+     P S L+DL+ +R         ++ VT+  M G+           GLA  ++++   G  + ++   N AV G +Y  +L D
Sbjct:  799 LLAEVRAILIELLPNGQDIKSEIDANIDVKLMAQQIDHGVMNP---LGLIEYISGLMKINCAPIR-----------DQLVDSMVAACKQGDFV---------QTLRICFDVLELMKLDYANHQLTRLRPYVIEHQTEFEWKWFKTQYESGSTTLDTTRSWLETVFKSPLPANTLSATPASTSNDTNLHQTDMINDAFLQLILQASQFSKKQIVPETLKMDTSRMISFYNDWQDITIL---SSLLVIFRQAAGPKCISHMDEA--------KKMLWVLLNDSDTT------MSHISLQVAHTAGKIREKPFTEKETEMVSSMMEKTLAPNSKLYDLIQKRVGENLKKVIVNGVTDKDMMGK----------HGLAQLETEVLDLGIRIRKVMELNRAVFGRLYIALLDD 1156          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|585112212|gb|EWM29640.1| (T-complex 11 [Nannochloropsis gaditana])

HSP 1 Score: 102.064 bits (253), Expect = 2.294e-18
Identity = 76/262 (29.01%), Postives = 125/262 (47.71%), Query Frame = 0
Query:  559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKE------------VHASMSASQHAK-YIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASP---ENASHLSSIAQGD-------------AMAHRNLLSRAMKCLLQ------QPVRIEICSNLPETLRYDGLRM 785
            ++ P L LV E+ ++L S+TP R DL +E+   LD  LL Q+  + LLD+  ++ +L++    ++ L+AP R A T  W+   ++             V  S+  S  +K ++PS     +  +F  +  ++D+   DI ++HI+   P+   HG  +ER +F  R   G   +    +WL+ V+AS    E +  +SS+  GD               A R LL RA   LL       +PV +    +LPETL  D  R+
Sbjct:  515 DFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPS-----ISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGRPVSVFSEDDLPETLAIDAQRL 771          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|1043306610|gb|OBZ91227.1| (T-complex protein 11-like protein 1 [Choanephora cucurbitarum])

HSP 1 Score: 96.2857 bits (238), Expect = 1.272e-16
Identity = 99/404 (24.50%), Postives = 174/404 (43.07%), Query Frame = 0
Query:  565 ALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIA-----------QGDAMAHRNLLSRAMKCLLQQPVRIEICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVLECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKIL 957
            +++ +V+ +L SL      L +++   +D  L+ Q   Q   D   +  ++ Y+ + +  + APVR  E                   Q+AK    A   ++ ++ R I   +D    D+A+  ++ LRP+L+   VEYEREKFA     G  +L+ T+AWL       ++   L  +A           + +  +H  +   A   LL QP  I   S+LPETL  D  RM ++++E    T+VA    L + F SV       HQ +     +  L +RL+ +L+    ++         LE  R    + E      + ++++ M+         ++ L+S RIS+V    +          +T  GL   +++L+     + RL  HN  V+   YS I+
Sbjct:  427 SVIQDVKMRLLSLVRPHTSLHKQIDEAIDLSLIKQQIKQHSFD---MQHMISYVLNTMSGMCAPVRDEEI------------------QNAK----ASTGMIDQM-RSILTILDNMNLDLANFRLRSLRPHLMSIAVEYEREKFATMLNQGTIQLVRTKAWLT------DSTQKLCQVAAQRNPEGVLPEKNNKPSHDAVFEDAFVSLLVQPQPIAHLSDLPETLYLDVKRMGEYQNEVQATTMVAALLMLAKNFGSV-------HQQQ-----LSRLASRLFTMLEDSSTSI-----DNLALEIERSANVRPE------RRTMVKTMVDKTINQTDTVYSLLSRRISSVIKNTIQNNQFVTEAVLTSNGLDPIRAQLQSISLKVLRLANHNRKVYSSWYSDII 775          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|946624418|ref|XP_014425295.1| (PREDICTED: T-complex protein 11 homolog isoform X1 [Pelodiscus sinensis])

HSP 1 Score: 94.7449 bits (234), Expect = 1.434e-16
Identity = 111/444 (25.00%), Postives = 190/444 (42.79%), Query Frame = 0
Query:  540 DGVKERRPIHQFRLKDDPLEYEPFLALVDEVREK-LTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLAS--------PENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRI----EICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILA-------LETRLYVLLQGVGNTVLLSCLMEEVLECARQICKK----EEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRD 959
            D +KE+       L   P EY   + L+ E++E  L  L PR+  L  ++   LD +L+ Q A  G LD P    L  YI D +  L AP+R  E +  + G    V                      ++ R IF  +D  + D+A+  IQ LRP+L  H + YE++KF          L +T  WL K  A         PE+    ++++ G A++  +     M  L Q  + +          PETL  D  R+ + + + +++T++A                L    S C GST+ +       L+     LL+G+  T     L++      R++ +     +   F+  ++S L+G + + A+  + +  ++ +RI +  +L++   AQN+H      GLA  Q +L   G+    +  HN  V+G  Y  IL++
Sbjct:   88 DALKEQ-------LSASPPEYTHVIQLLQEIKESILLLLLPRQSRLRSQIEEALDMELIRQEAEHGALDIP---NLAMYILDTMAMLCAPIR-DEEVQRLQGVTDPV----------------------QLLREIFRVLDLMKMDMANFTIQSLRPHLQDHAIHYEQKKFQELLAKLPNSLDHTTEWLSKAAAEVSASSSSHPEDHGSPTALSLG-AVSRSSATPNPMSVLNQGYMNLLHWEPGTEKYPETLLMDQARLQEIQLQVNQLTIIAAV--------------LLVSSSVC-GSTLFSSPVFVDRLKRVTKALLEGLPCTRFQEALLDISNHVHREVSEALLQLDYPAFTSEKSSSLKGQIRSIAEKDNAVRSIIEQRIHSFLSLHLSSTAQNSHNLPK--GLAPVQEELLEVGHRFSSVIHHNRQVYGPYYLAILKE 480          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|327259869|ref|XP_003214758.1| (PREDICTED: T-complex protein 11-like protein 1 [Anolis carolinensis])

HSP 1 Score: 94.7449 bits (234), Expect = 1.793e-16
Identity = 116/435 (26.67%), Postives = 189/435 (43.45%), Query Frame = 0
Query:  552 RLKDDPLEYEPFLALVDEVREKLTS-LTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRIE------------ICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQ--SECMGSTILALETRLYVLLQGVGNTVLLSCLMEEVL-ECARQICKKEEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVY----SKILRDEASILLC 966
            +LK+DP  Y+  + LV E++E L S L P    L  ++   LD +L+ Q A  G LD   I K++++I   +  L AP R  E         K++H         + +P         +FR IF+ +D  + D+A+  +  +RP+L+Q  VEYER+KF   +      L    AWL+      E A  L S A   A+A  +  + A    +  PV I+            +    PET+  D  R  + + + D++ L     ++L   LS    +L+     S+ +   I  L + L+  L        L+ L E++  E    + +     F+  + ++L+G +   A P + +  L+  RI A    Y+    Q +  A+   GL+S Q +LE       RL  +N  V    Y    +KIL  E S  LC
Sbjct:  116 QLKEDPPSYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEALDLELIKQEAENGALD---ISKMVEFIIGMMGTLCAPARDEEIKKL-----KDIH---------EIVP---------LFRAIFSVLDLMKMDMANFAVSSIRPHLMQQSVEYERKKFQELYEKQPNSLDFVTAWLQ------EAADDLKSRA---ALAVDDGTTSASGTAVLCPVAIQNHAYLKLLKWNHLQKPFPETVLMDQSRFQEMQLDLDQLILTG---AVLLVTLSAAGTALSGLPGFSDKLKMVIRVLLSGLH--LPSFNLNEALAILSEKICAEVNSSLSQHGYTPFTAEKETVLKGQVQALASPDNSVCKLIDSRIQAYLESYLASGHQKSLPAVPG-GLSSVQKELEEIAVKYVRLVNYNKMVFSPYYDVVLNKILNKEESPKLC 509          
BLAST of EWM25426.1 vs. NCBI_GenBank
Match: gi|946624428|ref|XP_014425298.1| (PREDICTED: T-complex protein 11 homolog isoform X4 [Pelodiscus sinensis])

HSP 1 Score: 93.9745 bits (232), Expect = 1.797e-16
Identity = 111/444 (25.00%), Postives = 190/444 (42.79%), Query Frame = 0
Query:  540 DGVKERRPIHQFRLKDDPLEYEPFLALVDEVREK-LTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGFEKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLAS--------PENASHLSSIAQGDAMAHRNLLSRAMKCLLQQPVRI----EICSNLPETLRYDGLRMTKFRDEQDRITLVAVYSSLLRQFLSVQCPSLNSHQSECMGSTILA-------LETRLYVLLQGVGNTVLLSCLMEEVLECARQICKK----EEAVFSGAQASILQGMLHNAAKPKSPLFDLVSERISAVTNLYMCGEAQNAHKAMTCFGLASFQSKLEVTGYGLHRLFMHNLAVHGDVYSKILRD 959
            D +KE+       L   P EY   + L+ E++E  L  L PR+  L  ++   LD +L+ Q A  G LD P    L  YI D +  L AP+R  E +  + G    V                      ++ R IF  +D  + D+A+  IQ LRP+L  H + YE++KF          L +T  WL K  A         PE+    ++++ G A++  +     M  L Q  + +          PETL  D  R+ + + + +++T++A                L    S C GST+ +       L+     LL+G+  T     L++      R++ +     +   F+  ++S L+G + + A+  + +  ++ +RI +  +L++   AQN+H      GLA  Q +L   G+    +  HN  V+G  Y  IL++
Sbjct:   39 DALKEQ-------LSASPPEYTHVIQLLQEIKESILLLLLPRQSRLRSQIEEALDMELIRQEAEHGALDIP---NLAMYILDTMAMLCAPIR-DEEVQRLQGVTDPV----------------------QLLREIFRVLDLMKMDMANFTIQSLRPHLQDHAIHYEQKKFQELLAKLPNSLDHTTEWLSKAAAEVSASSSSHPEDHGSPTALSLG-AVSRSSATPNPMSVLNQGYMNLLHWEPGTEKYPETLLMDQARLQEIQLQVNQLTIIAAV--------------LLVSSSVC-GSTLFSSPVFVDRLKRVTKALLEGLPCTRFQEALLDISNHVHREVSEALLQLDYPAFTSEKSSSLKGQIRSIAEKDNAVRSIIEQRIHSFLSLHLSSTAQNSHNLPK--GLAPVQEELLEVGHRFSSVIHHNRQVYGPYYLAILKE 431          
The following BLAST results are available for this feature:
BLAST of EWM25426.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107187|gb|EWM25426.1|0.000e+0100.00T-complex 11 [Nannochloropsis gaditana][more]
gi|553196590|ref|XP_005856379.1|0.000e+099.90t-complex 11 like isoform cra b [Nannochloropsis g... [more]
gi|299471621|emb|CBN76843.1|1.353e-6329.65novel protein containing a T-complex protein 11 do... [more]
gi|299471356|emb|CBN79311.1|5.076e-2132.26t-complex 11 (mouse) like 2, isoform CRA_a (Partia... [more]
gi|1028573413|gb|OAJ41717.1|4.312e-2025.25hypothetical protein BDEG_25273 [Batrachochytrium ... [more]
gi|585112212|gb|EWM29640.1|2.294e-1829.01T-complex 11 [Nannochloropsis gaditana][more]
gi|1043306610|gb|OBZ91227.1|1.272e-1624.50T-complex protein 11-like protein 1 [Choanephora c... [more]
gi|946624418|ref|XP_014425295.1|1.434e-1625.00PREDICTED: T-complex protein 11 homolog isoform X1... [more]
gi|327259869|ref|XP_003214758.1|1.793e-1626.67PREDICTED: T-complex protein 11-like protein 1 [An... [more]
gi|946624428|ref|XP_014425298.1|1.797e-1625.00PREDICTED: T-complex protein 11 homolog isoform X4... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5252rna5252Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications