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Properties
| Property Name | Value |
|---|
| Product | pre-rrna-processing protein esf2 |
| Orig transcript id | gnl|cribi|Naga_100084g19.1558.mrna |
| Orig protein id | gnl|cribi|Naga_100084g19.1558 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:909528..911135 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4120 ID=rna4120|Name=rna4120|organism=Nannochloropsis gaditana|type=mRNA|length=2151bp
ATGGCGCAGCAATTTGCCCACGTTTTTCAGCCTTTAAAGCTCAAGTCTGG
GGCCACACTTCGTAATCGTATTGTCATGGGATCCATGCACGTGGGTCTGG
AAGATGGCGGCGTTATAGGGGGAGGGCTGCACAAACTGGGCGCTTTCTAT
GCTGAACGTGCAAAGCACCAAGTCGGACTGATAGTTACGGGCGGCATTGC
CCCGAACCGTCAAGGAAAGCTCTCTCCTTTCGCAGCCAAGCTGACAAACC
CTTTGGAGGTACGAGCCCACCGGGACGTGACCAGTGCCGTGCATAACGCC
CATCCTGAAGCGAAGATTGCCATGCAAATCTTACACGCCGGCCGCTATGC
TTATCACCCCTTCTTGGTGGGGCCGAGCGCCATTAAAGCGCCGATCGGCA
TGTATTCCCCACGGGCTCTGACCGAGGCGGAGGTCGAGCGGACCATTCAG
GACTACGCGCACTGTGCCAGCCGGGCCCGGGAAGCCGGTTACGACGGCGT
GGAGATCATGGGCTCCGAGGGCTACCTGATCAATCAGTTTTTGGTGGAGC
ACACCAACAAGAGGACAGGTGCCTGGGGAGGCCCCTACGAAAACAGAATG
CGCTTCCCCGTGGAGATTGTCAAGGCCGTCCGAGCGGCCGTGGGAGAAGA
TTTCATCATCATTTTCCGCCTGAGCATGCTGGACCTGATCCCGGCGGGCT
CGGCGTGGGAGGAAGTGGTGACCTTGGCCCAAGCCCTGGAGGCCGCCGGT
GCGACGATCATCAATACAGGGATCGGCTGGCACGAGGCGCGGATCCCCAC
CATTGCCACCTGCGTCCCGCGCGCAGGGTATGCCTGGGTGACGAAGAAAT
TGAAGGAAACGGGGGTGTTGGGGGTTCCTCTCTGCACCACGAACCGGATC
AATATGCCCGCCACGGCCGAGAGGGTACTGGCCGACGGCAACGCCGACCT
GGTCTCCATGGCACGACCCTTTTTGGCGGACCCCGCCATCTTGAGTAAAG
CCGCAGAGGGGCGCGTGGAGGAAATCAACACGTGCATTGCCTGCAACCAG
GCTTGCCTTGACCACACGTTCAAGGGACAGCGTGCCAGCTGTCTGGTCAA
CCCTCGGGCGGGGTACGAGACGGAACTGCACCTACTTCCCGTATCTCCTG
GGAGTAAGATGAGGGTGGCTGTGGTGGGGGCGGGGCCGGCAGGATTGGCC
TGCGCGACGGCGGCGGCGGAGAGGGGCCACGCGGTGACGCTGTTTGAGAA
AGCAGATGAGATCGGCGGGCAGTTCAATATGGCGAAAGTCATCCCCGGCA
AGGAGGAATTTCACGAGACGATACGTTACTTTTCCCATCGACTGAAGCTT
CTTCAAGTCGATGTGCGTCTGAACTCGCCTGCTACCGCGGAGGACTTGGC
GGCCGAGGGGTTCGACCGGGTCGTGATGGCCACGGGGGTCCTCCCCCGCC
CGGTCAAAATACCCGGATGTGAACATCCCAAGGTTCTTTCGTACGTGGAC
GTGTTGAGGGGCAGAAAGGAGGTGGGGAAGCGCGTGGCCATTATAGGCGC
CGGTGGCATTGGGTTTGACGTGGCGGAATATTTGCTGCATGACCCCAGCC
TCCCCCCGGCCAGCGTAAATGTGGGCAAGTTTTTGAAGGAATGGAGAATC
GATGGGGACAACAAGGAAAGGGGCGGGCTGCTTGAAAAGGAGGCCCATGA
CCCGGCCTTTCGAGAGATCTACCTCCTGCAACGGAAGAAAGGCAAAATGG
GGGGGGGGCTGGGGAAAACAACTGGGTGGATCCACCGCGTATCCTTGAAG
AAAGGAGGCGTGCACATGGTCACGGGCGTGGAGTATCTGAAGATAGATGA
TGAGGGCCTCCATCTTAAGCTCAAGAGCTCTGGAGAGACCAAGGTGCTGA
ACGTAGACACCATCGTCACGTGCGCGGGTCAAGAGCCCTTGCGGGAGTTG
CAAGCCCCCCTGACGGCAGCCGGATTGGGGGTGTTTAGAATTGGGGGTGC
AGAGATGGCAGCAGAGCTGGACGCAAAGAGAGCAATAGACCAGGGAACCA
GGCTTGCGGCGTGCCTCGAAAAAGCGAAACCGGGAGAAGTATTCTCGGCA
CCTGTGTCGTGGGAGGCGAAGGTCATGTCCAAATTGGGTTTCATGAAATA
G back to topprotein sequence of rna4120 >rna4120-protein ID=rna4120-protein|Name=rna4120|organism=Nannochloropsis gaditana|type=polypeptide|length=418bp
MLRKMIGDGKLLNVALLKQLDMRVHEEEDKLMFKTLSFAGRKEKKYKRLS
QCFQCCQEFVLYDQLCSFFLLIKRKNHSSTQIFDAGTERAGRKAINLRLG
AVSWMVKKAKLRHDKPEKGGGDEEIHGPGNVEGINNNMPITTERPSSSSL
AGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLE
KMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAG
ALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRM
EMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGR
ETRKDLRVLRRFRQVAPLRDGGERGVAAREGAEGLTGEGLESGGKKRRRG
EGMDKELLKAVFQEARPK back to topmRNA from alignment at CM002462.1:909528..911135+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4120 ID=rna4120|Name=rna4120|organism=Nannochloropsis gaditana|type=mRNA|length=1608bp|location=Sequence derived from alignment at CM002462.1:909528..911135+ (Nannochloropsis gaditana)
ATGTTGAGAAAAATGATTGGGGACGGAAAGCTACTGAATGTAGCTTTGTT
GAAACAACTTGATATGAGAgtgcatgaggaggaagataagCTCATGTTCA
AAACACTGTCATTCGCTGgacggaaagaaaaaaagtacAAACGGCTGTCC
CAATGCTTTCAGTACGTGTTTGCCTGTAGAATTCCAATGTTGATGACGCG
TGGTGTGTTTTGATTGATTGAATGAAGATGGCACGTACTAAATTCGATGG
GAACGTACTCGAAGTACCTCACAGCGCGAAGACTCTTGATAGCCCGAAAC
GATGCTGGCATCCTACAGCCCTCTGGACAAATTGACAGAATTATTTGTTG
AGTACCTGAGCGTGTTTGAGATATAAAGACCAGCATTGACATGTATGACC
TTCATTCGCCAGGTGTTGTCAAGAATTTGTCTTGTACGATCAATTGTGct
cctttttcttgttgGTGAGGCCCGCCAGCCGGGGATCAGAGGAACTGCCA
CAACCAAATAAAAAACCGTGCGAATTTCACGATCTCCTAACCATATTCAT
GTATCGACCAAAAGATCAAGCGAAAAAATCACTCATCCACGCAGATCTTC
GACGCTGGCACGGAAAGAGCAGGTCGTAAAGCTATTAATTTGCGCTTGGG
GGCAGTATCTTGGATGGTAAAGAAGGCGAAGCTCAGGCATGACAAGCCAG
AAAAAGGTGGGGGAGACGAAGAAATCCACGGCCCTGGCAATGTTGAGGGA
ATCAACAACAATATGCCCATCACGACGGAgcggccgtcctcctcttcttt
ggcAGGGCCTGCTGGCCCAAAACATGACAAGACAGAGCGCCTgaagagag
aggcgaggCAGTACCGCGACGAAATAGCACGTAGAGGGGTCGTATATTtg
tcttctcttcctccttacATGAAGCCGGCGAAGGTAAAACATCTTCTGGA
AAAGATGGCTCCAGTCACACGGCTGTACatggtggaagaggatgtCACCA
TACGGAAACGGCGCAtcaagggcggagggaataAGAAGAAAAAATATGTG
GAAGGATGGGTGGAGTTTCAGGATAAAAGGATGGCAAAAGAAGTTGCCGG
GGCATTGAACGGATCCTtggtgggcgggaaaaagcACAATTTCTACCACG
ACGACATGTGGGTGATGAAGTACTTGAGAGGCTTCAAATGGAGCCACTTA
ACGGAAAAATTGGCCTATGAGCGGCGCGTTCGCGAGCAGAAGCTGAGGAT
GGAGATGCTCCaggccaagaaggagaatgCTGCGTTTGTGGGGTtggtgg
agaagaagaaggagctggagggtatggaggagaggagacggaaggaggga
aaggagggacggcgcCGGGACGACGAAGTCGGAGAAgtcggagaagggag
ggaaacaaggAAAGACCTTCGCGTGCTGCGCCGCTTCCGCCAAGTGGCCC
CCTTacgcgatggaggggagcgaggagtGGCCGCtcgggagggagcagaa
ggGCTTacaggggaggggctggaaagcggagggaagaaacgaaggcgtgg
ggagggtaTGGACAAGGAGCTTCTCAAGGCGGTGTTTCAAGAAGCCCGTC
CCAAATGA back to topCoding sequence (CDS) from alignment at CM002462.1:909528..911135+ >rna4120 ID=rna4120|Name=rna4120|organism=Nannochloropsis gaditana|type=CDS|length=3771bp|location=Sequence derived from alignment at CM002462.1:909528..911135+ (Nannochloropsis gaditana)
ATGTTGAGAAAAATGATTGGGGACGGAAAGCTACTGAATGTAGCTTTGTT
GAAACAACTTGATATGAGAgtgcatgaggaggaagataagCTCATGTTCA
AAACACTGTCATTCGCTGgacggaaagaaaaaaagtacAAACGGCTGTCC
CAATGCTTTCAGTGTTGTCAAGAATTTGTCTTGTACGATCAATTGTGctc
ctttttcttgttgATCAAGCGAAAAAATCACTCATCCACGCAGATCTTCG
ACGCTGGCACGGAAAGAGCAGGTCGTAAAGCTATTAATTTGCGCTTGGGG
GCAGTATCTTGGATGGTAAAGAAGGCGAAGCTCAGGCATGACAAGCCAGA
AAAAGGTGGGGGAGACGAAGAAATCCACGGCCCTGGCAATGTTGAGGGAA
TCAACAACAATATGCCCATCACGACGGAgcggccgtcctcctcttctttg
gcAGGGCCTGCTGGCCCAAAACATGACAAGACAGAGCGCCTgaagagaga
ggcgaggCAGTACCGCGACGAAATAGCACGTAGAGGGGTCGTATATTtgt
cttctcttcctccttacATGAAGCCGGCGAAGGTAAAACATCTTCTGGAA
AAGATGGCTCCAGTCACACGGCTGTACatggtggaagaggatgtCACCAT
ACGGAAACGGCGCAtcaagggcggagggaataAGAAGAAAAAATATGTGG
AAGGATGGGTGGAGTTTCAGGATAAAAGGATGGCAAAAGAAGTTGCCGGG
GCATTGAACGGATCCTtggtgggcgggaaaaagcACAATTTCTACCACGA
CGACATGTGGGTGATGAAGTACTTGAGAGGCTTCAAATGGAGCCACTTAA
CGGAAAAATTGGCCTATGAGCGGCGCGTTCGCGAGCAGAAGCTGAGGATG
GAGATGCTCCaggccaagaaggagaatgCTGCGTTTGTGGGGTtggtgga
gaagaagaaggagctggagggtatggaggagaggagacggaaggagggaa
aggagggacggcgcCGGGACGACGAAGTCGGAGAAgtcggagaagggagg
gaaacaaggAAAGACCTTCGCGTGCTGCGCCGCTTCCGCCAAGTGGCCCC
CTTacgcgatggaggggagcgaggagtGGCCGCtcgggagggagcagaag
gGCTTacaggggaggggctggaaagcggagggaagaaacgaaggcgtggg
gagggtaTGGACAAGGAGCTTCTCAAGGCGGTGTTTCAAGAAGCCCGTCC
CAAATGAATGTTGAGAAAAATGATTGGGGACGGAAAGCTACTGAATGTAG
CTTTGTTGAAACAACTTGATATGAGAgtgcatgaggaggaagataagCTC
ATGTTCAAAACACTGTCATTCGCTGgacggaaagaaaaaaagtacAAACG
GCTGTCCCAATGCTTTCAGTGTTGTCAAGAATTTGTCTTGTACGATCAAT
TGTGctcctttttcttgttgATCAAGCGAAAAAATCACTCATCCACGCAG
ATCTTCGACGCTGGCACGGAAAGAGCAGGTCGTAAAGCTATTAATTTGCG
CTTGGGGGCAGTATCTTGGATGGTAAAGAAGGCGAAGCTCAGGCATGACA
AGCCAGAAAAAGGTGGGGGAGACGAAGAAATCCACGGCCCTGGCAATGTT
GAGGGAATCAACAACAATATGCCCATCACGACGGAgcggccgtcctcctc
ttctttggcAGGGCCTGCTGGCCCAAAACATGACAAGACAGAGCGCCTga
agagagaggcgaggCAGTACCGCGACGAAATAGCACGTAGAGGGGTCGTA
TATTtgtcttctcttcctccttacATGAAGCCGGCGAAGGTAAAACATCT
TCTGGAAAAGATGGCTCCAGTCACACGGCTGTACatggtggaagaggatg
tCACCATACGGAAACGGCGCAtcaagggcggagggaataAGAAGAAAAAA
TATGTGGAAGGATGGGTGGAGTTTCAGGATAAAAGGATGGCAAAAGAAGT
TGCCGGGGCATTGAACGGATCCTtggtgggcgggaaaaagcACAATTTCT
ACCACGACGACATGTGGGTGATGAAGTACTTGAGAGGCTTCAAATGGAGC
CACTTAACGGAAAAATTGGCCTATGAGCGGCGCGTTCGCGAGCAGAAGCT
GAGGATGGAGATGCTCCaggccaagaaggagaatgCTGCGTTTGTGGGGT
tggtggagaagaagaaggagctggagggtatggaggagaggagacggaag
gagggaaaggagggacggcgcCGGGACGACGAAGTCGGAGAAgtcggaga
agggagggaaacaaggAAAGACCTTCGCGTGCTGCGCCGCTTCCGCCAAG
TGGCCCCCTTacgcgatggaggggagcgaggagtGGCCGCtcgggaggga
gcagaaggGCTTacaggggaggggctggaaagcggagggaagaaacgaag
gcgtggggagggtaTGGACAAGGAGCTTCTCAAGGCGGTGTTTCAAGAAG
CCCGTCCCAAATGAATGTTGAGAAAAATGATTGGGGACGGAAAGCTACTG
AATGTAGCTTTGTTGAAACAACTTGATATGAGAgtgcatgaggaggaaga
taagCTCATGTTCAAAACACTGTCATTCGCTGgacggaaagaaaaaaagt
acAAACGGCTGTCCCAATGCTTTCAGTGTTGTCAAGAATTTGTCTTGTAC
GATCAATTGTGctcctttttcttgttgATCAAGCGAAAAAATCACTCATC
CACGCAGATCTTCGACGCTGGCACGGAAAGAGCAGGTCGTAAAGCTATTA
ATTTGCGCTTGGGGGCAGTATCTTGGATGGTAAAGAAGGCGAAGCTCAGG
CATGACAAGCCAGAAAAAGGTGGGGGAGACGAAGAAATCCACGGCCCTGG
CAATGTTGAGGGAATCAACAACAATATGCCCATCACGACGGAgcggccgt
cctcctcttctttggcAGGGCCTGCTGGCCCAAAACATGACAAGACAGAG
CGCCTgaagagagaggcgaggCAGTACCGCGACGAAATAGCACGTAGAGG
GGTCGTATATTtgtcttctcttcctccttacATGAAGCCGGCGAAGGTAA
AACATCTTCTGGAAAAGATGGCTCCAGTCACACGGCTGTACatggtggaa
gaggatgtCACCATACGGAAACGGCGCAtcaagggcggagggaataAGAA
GAAAAAATATGTGGAAGGATGGGTGGAGTTTCAGGATAAAAGGATGGCAA
AAGAAGTTGCCGGGGCATTGAACGGATCCTtggtgggcgggaaaaagcAC
AATTTCTACCACGACGACATGTGGGTGATGAAGTACTTGAGAGGCTTCAA
ATGGAGCCACTTAACGGAAAAATTGGCCTATGAGCGGCGCGTTCGCGAGC
AGAAGCTGAGGATGGAGATGCTCCaggccaagaaggagaatgCTGCGTTT
GTGGGGTtggtggagaagaagaaggagctggagggtatggaggagaggag
acggaaggagggaaaggagggacggcgcCGGGACGACGAAGTCGGAGAAg
tcggagaagggagggaaacaaggAAAGACCTTCGCGTGCTGCGCCGCTTC
CGCCAAGTGGCCCCCTTacgcgatggaggggagcgaggagtGGCCGCtcg
ggagggagcagaaggGCTTacaggggaggggctggaaagcggagggaaga
aacgaaggcgtggggagggtaTGGACAAGGAGCTTCTCAAGGCGGTGTTT
CAAGAAGCCCGTCCCAAATGA back to top
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