Naga_100084g19, gene3965 (gene) Nannochloropsis gaditana

Overview
NameNaga_100084g19
Unique Namegene3965
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:909528..911135 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100084g19
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:909528..911135 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00800NO08G00800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4120rna4120-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4120rna4120Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4120

>rna4120-protein ID=rna4120-protein|Name=rna4120|organism=Nannochloropsis gaditana|type=polypeptide|length=418bp
MLRKMIGDGKLLNVALLKQLDMRVHEEEDKLMFKTLSFAGRKEKKYKRLS
QCFQCCQEFVLYDQLCSFFLLIKRKNHSSTQIFDAGTERAGRKAINLRLG
AVSWMVKKAKLRHDKPEKGGGDEEIHGPGNVEGINNNMPITTERPSSSSL
AGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLE
KMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAG
ALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRM
EMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGR
ETRKDLRVLRRFRQVAPLRDGGERGVAAREGAEGLTGEGLESGGKKRRRG
EGMDKELLKAVFQEARPK
back to top
Synonyms
Publications