NO08G00800, NO08G00800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00800 vs. NCBI_GenBank
Match: EWM26550.1 (pre-rrna-processing protein esf2 [Nannochloropsis gaditana]) HSP 1 Score: 256.1 bits (653), Expect = 1.700e-64 Identity = 174/257 (67.70%), Postives = 190/257 (73.93%), Query Frame = 0 Query: 138 KTDHLKKEAQRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELEG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRVVRRFRQVAPLGDGPGSAV-ARE------GXXXXXXXXXXXXXGGMDKELLKAVFQQPR 387 KT+ LK+EA++YRDEIARRGVVYLSSLPP+MKPAKVKHLLEK P+TRLYMVEE YVEGWVEF++K +AK++A LNGSLVGGKK NFYHDDMW MKYL+GF W HLTEKLAYERRVREQKLR+EM+QAKKENAAFVGLVEKK+ELEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX APL DG V ARE G GMDKELLKAVFQ+ R Sbjct: 160 KTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLRDGGERGVAAREGAEGLTGEGLESGGKKRRRGEGMDKELLKAVFQEAR 416
BLAST of NO08G00800 vs. NCBI_GenBank
Match: GAX98457.1 (pre-rRNA-processing protein ESF2 [Pythium insidiosum]) HSP 1 Score: 179.5 bits (454), Expect = 2.000e-41 Identity = 81/158 (51.27%), Postives = 112/158 (70.89%), Query Frame = 0 Query: 144 KEAQRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 K+ + YR+ A+RGVVY+S +PPFMKP K+KHLL ++G I R+Y+V E Y EGW+EF++K +AK +A LN +GG+KR++YHDDMW +KYLKGF W HLTEK+AYE R+REQKLR+E+ QAKKEN A++ VE+ ++ + Sbjct: 33 KKLEEYRERAAKRGVVYISRVPPFMKPEKLKHLLGQYGAINRVYLVPEDKAQQKRRVAAGGNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQ 190
BLAST of NO08G00800 vs. NCBI_GenBank
Match: XP_002907063.1 (pre-rRNA-processing protein ESF2 [Phytophthora infestans T30-4] >EEY63627.1 pre-rRNA-processing protein ESF2 [Phytophthora infestans T30-4]) HSP 1 Score: 177.2 bits (448), Expect = 1.000e-40 Identity = 78/166 (46.99%), Postives = 119/166 (71.69%), Query Frame = 0 Query: 136 KSKTDHLKKEAQRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 K+ D +++ ++++++ RRGVVY++ +PPFMKP K++HLL K+G + R+Y+V E Y EGW+EF+ K +AK++A+ LN + +GG+KR++YHDDMW +KYLKGF W HLTEK+AYE R+R+QKLR+E+ QAKKEN A++ VE+ ++ E Sbjct: 16 KALADLSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFE 181
BLAST of NO08G00800 vs. NCBI_GenBank
Match: ETK93746.1 (hypothetical protein L915_03120 [Phytophthora parasitica] >ETL47124.1 hypothetical protein L916_03091 [Phytophthora parasitica] >ETO82530.1 hypothetical protein F444_03307 [Phytophthora parasitica P1976] >ETP23666.1 hypothetical protein F441_03226 [Phytophthora parasitica CJ01A1] >ETP51681.1 hypothetical protein F442_03221 [Phytophthora parasitica P10297]) HSP 1 Score: 176.4 bits (446), Expect = 1.700e-40 Identity = 76/159 (47.80%), Postives = 118/159 (74.21%), Query Frame = 0 Query: 143 KKEAQRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 +++ ++++++ RRGVVY++ +PPFMKP K+++LL K+G + R+Y+V E Y EGW+EF++K +AK++A+ LN +L+GG+KR++YHDDMW +KYLKGF W HLTEK+AYE R+R+QKLR+E+ QAKKEN A++ VE+ ++ E Sbjct: 23 REKMEQFKEKAERRGVVYIARVPPFMKPEKLRYLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFE 181
BLAST of NO08G00800 vs. NCBI_GenBank
Match: ETM00237.1 (hypothetical protein L917_03020 [Phytophthora parasitica]) HSP 1 Score: 175.6 bits (444), Expect = 2.900e-40 Identity = 76/155 (49.03%), Postives = 115/155 (74.19%), Query Frame = 0 Query: 147 QRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 ++++++ RRGVVY++ +PPFMKP K+++LL K+G + R+Y+V E Y EGW+EF++K +AK++A+ LN +L+GG+KR++YHDDMW +KYLKGF W HLTEK+AYE R+R+QKLR+E+ QAKKEN A++ VE+ ++ E Sbjct: 2 EQFKEKAERRGVVYIARVPPFMKPEKLRYLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFE 156
BLAST of NO08G00800 vs. NCBI_GenBank
Match: XP_008900442.1 (hypothetical protein PPTG_07825 [Phytophthora parasitica INRA-310] >ETN14173.1 hypothetical protein PPTG_07825 [Phytophthora parasitica INRA-310] >KUF76808.1 Pre-rRNA-processing protein ESF2 [Phytophthora nicotianae]) HSP 1 Score: 175.6 bits (444), Expect = 2.900e-40 Identity = 75/159 (47.17%), Postives = 118/159 (74.21%), Query Frame = 0 Query: 143 KKEAQRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 +++ ++++++ RRGVVY++ +PPFMKP K+++L+ K+G + R+Y+V E Y EGW+EF++K +AK++A+ LN +L+GG+KR++YHDDMW +KYLKGF W HLTEK+AYE R+R+QKLR+E+ QAKKEN A++ VE+ ++ E Sbjct: 23 REKMEQFKEKAERRGVVYIARVPPFMKPEKLRYLIGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFE 181
BLAST of NO08G00800 vs. NCBI_GenBank
Match: ETI53895.1 (hypothetical protein F443_03240 [Phytophthora parasitica P1569]) HSP 1 Score: 174.5 bits (441), Expect = 6.500e-40 Identity = 75/159 (47.17%), Postives = 117/159 (73.58%), Query Frame = 0 Query: 143 KKEAQRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 +++ ++++++ RRGVVY++ +PPFMKP K+++LL K+G + R+Y+V E Y EGW+EF++K +AK++A+ LN +L+GG+KR++YHDDMW +KYLKGF W HLTEK+AYE +R+QKLR+E+ QAKKEN A++ VE+ ++ E Sbjct: 23 REKMEQFKEKAERRGVVYIARVPPFMKPEKLRYLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENHIRDQKLRMEIAQAKKENEAYLERVEQSKQFE 181
BLAST of NO08G00800 vs. NCBI_GenBank
Match: ETM53431.1 (hypothetical protein L914_03094 [Phytophthora parasitica]) HSP 1 Score: 174.5 bits (441), Expect = 6.500e-40 Identity = 75/159 (47.17%), Postives = 117/159 (73.58%), Query Frame = 0 Query: 143 KKEAQRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 +++ ++++++ RRGVVY++ +PPFMKP K+++LL K+G + R+Y+V E Y EGW+EF++K +AK++A+ LN +L+GG+KR++YHDDMW +KYLKGF W HLTEK+AYE +R+QKLR+E+ QAKKEN A++ VE+ ++ E Sbjct: 23 REKMEQFKEKAERRGVVYIARVPPFMKPEKLRYLLGKYGELNRIYLVPEDEALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENHIRDQKLRMEIAQAKKENEAYLERVEQSKQFE 181
BLAST of NO08G00800 vs. NCBI_GenBank
Match: OQR82533.1 (pre-rRNA-processing protein ESF2 [Achlya hypogyna]) HSP 1 Score: 171.0 bits (432), Expect = 7.200e-39 Identity = 79/152 (51.97%), Postives = 108/152 (71.05%), Query Frame = 0 Query: 150 RDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 R + +++GVVY+S +PPFMKP KV+HLL ++G I R+Y+VEE + EGW+EF K +AK++A LN +GGKKR FY+DD+W +KYLKGF W HLTEK+AYE RVR+QKLR+E+ QA KENAAF+ VE+ ++L+ Sbjct: 172 RKKESKKGVVYMSRVPPFMKPEKVRHLLSQYGDIERIYLVEEDKTHRKKRLKAGGNKKVNFTEGWIEFSHKSVAKRVAAALNTKPMGGKKRGFYYDDIWNLKYLKGFKWAHLTEKIAYENRVRDQKLRLEIAQAAKENAAFMERVEQSKQLD 323
BLAST of NO08G00800 vs. NCBI_GenBank
Match: XP_009520186.1 (hypothetical protein PHYSODRAFT_284998 [Phytophthora sojae] >EGZ24898.1 hypothetical protein PHYSODRAFT_284998 [Phytophthora sojae]) HSP 1 Score: 170.2 bits (430), Expect = 1.200e-38 Identity = 74/159 (46.54%), Postives = 115/159 (72.33%), Query Frame = 0 Query: 143 KKEAQRYRDEIARRGVVYLSSLPPFMKPAKVKHLLEKFGPITRLYMVEEXXXXXXXXXXXXXXXXXXYVEGWVEFKEKGLAKQIAEHLNGSLVGGKKRNFYHDDMWTMKYLKGFNWGHLTEKLAYERRVREQKLRVEMMQAKKENAAFVGLVEKKRELE 302 +++ ++++++ RRGVVY++ +PPFMKP K++ LL K+G + R+Y+V E Y EGW+EF++K AK++A+ LN + +GG+KR++YHDDMW +KYLKGF W HLTEK+AYE R+R+QKLR+E+ QAKKEN A++ V++ ++ E Sbjct: 24 REKMEQFKEKAERRGVVYIARVPPFMKPEKLRSLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRQKYTEGWIEFEDKKEAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFE 182 The following BLAST results are available for this feature:
BLAST of NO08G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00800 ID=NO08G00800|Name=NO08G00800|organism=Nannochloropsis oceanica|type=gene|length=1737bpback to top protein sequence of NO08G00800.1 >NO08G00800.1-protein ID=NO08G00800.1-protein|Name=NO08G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bpback to top Synonyms
Publications
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