EWM26550.1, cds4110 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|585108635|gb|EWM26550.1| (pre-rrna-processing protein esf2 [Nannochloropsis gaditana]) HSP 1 Score: 845.114 bits (2182), Expect = 0.000e+0 Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0 Query: 1 MLRKMIGDGKLLNVALLKQLDMRVHEEEDKLMFKTLSFAGRKEKKYKRLSQCFQCCQEFVLYDQLCSFFLLIKRKNHSSTQIFDAGTERAGRKAINLRLGAVSWMVKKAKLRHDKPEKGGGDEEIHGPGNVEGINNNMPITTERPSSSSLAGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGRETRKDLRVLRRFRQVAPLRDGGERGVAAREGAEGLTGEGLESGGKKRRRGEGMDKELLKAVFQEARPK 418 MLRKMIGDGKLLNVALLKQLDMRVHEEEDKLMFKTLSFAGRKEKKYKRLSQCFQCCQEFVLYDQLCSFFLLIKRKNHSSTQIFDAGTERAGRKAINLRLGAVSWMVKKAKLRHDKPEKGGGDEEIHGPGNVEGINNNMPITTERPSSSSLAGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGRETRKDLRVLRRFRQVAPLRDGGERGVAAREGAEGLTGEGLESGGKKRRRGEGMDKELLKAVFQEARPK Sbjct: 1 MLRKMIGDGKLLNVALLKQLDMRVHEEEDKLMFKTLSFAGRKEKKYKRLSQCFQCCQEFVLYDQLCSFFLLIKRKNHSSTQIFDAGTERAGRKAINLRLGAVSWMVKKAKLRHDKPEKGGGDEEIHGPGNVEGINNNMPITTERPSSSSLAGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGRETRKDLRVLRRFRQVAPLRDGGERGVAAREGAEGLTGEGLESGGKKRRRGEGMDKELLKAVFQEARPK 418
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|953486978|emb|CEG49040.1| (pre-rrna-processing protein esf2 [Plasmopara halstedii]) HSP 1 Score: 210.305 bits (534), Expect = 2.636e-62 Identity = 103/222 (46.40%), Postives = 150/222 (67.57%), Query Frame = 0 Query: 147 SSSLAGP-AGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGRETRKDLRVLRRFRQVAP 367 SS +A P AG +K Q++++ RRGVVY++ +PP+MKP K++HLL K + R+Y+V ED + K+R+ GGN++ KY EGW+EF+DK++AK VA LN + +GG+K ++YHDDMW +KYL+GFKW HLTEK+AYE R+R+QKLRME+ QAKKEN ++ VE+ K+LE MEER+ ++ ++ +D + +V R F Q AP Sbjct: 6 SSDVAKPLAGLSREKM-------MQFKEKTERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRMKYTEGWIEFEDKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEVYLERVEQSKQLEKMEERKSEKNRDQNATNDAMQQVR------------RTFHQKAP 208
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|567968619|gb|ETK93746.1| (hypothetical protein L915_03120 [Phytophthora parasitica] >gi|567997032|gb|ETL47124.1| hypothetical protein L916_03091 [Phytophthora parasitica] >gi|570334582|gb|ETO82530.1| hypothetical protein F444_03307 [Phytophthora parasitica P1976] >gi|570958687|gb|ETP23666.1| hypothetical protein F441_03226 [Phytophthora parasitica CJ01A1] >gi|570994591|gb|ETP51681.1| hypothetical protein F442_03221 [Phytophthora parasitica P10297]) HSP 1 Score: 209.149 bits (531), Expect = 7.523e-62 Identity = 93/190 (48.95%), Postives = 139/190 (73.16%), Query Frame = 0 Query: 140 ITTERPSSSSLAGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERR 329 + +P++S+ G +K E Q++++ RRGVVY++ +PP+MKP K+++LL K + R+Y+V ED + K+R+ GGN+++KY EGW+EF+DK++AK VA LN +L+GG+K ++YHDDMW +KYL+GFKW HLTEK+AYE R+R+QKLRME+ QAKKEN A++ VE+ K+ E ME R+ Sbjct: 5 VDAAKPNASTANALVGLSREKME-------QFKEKAERRGVVYIARVPPFMKPEKLRYLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEARK 187
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|675183115|ref|XP_008900442.1| (hypothetical protein PPTG_07825 [Phytophthora parasitica INRA-310] >gi|568099459|gb|ETN14173.1| hypothetical protein PPTG_07825 [Phytophthora parasitica INRA-310] >gi|970629592|gb|KUF76808.1| Pre-rRNA-processing protein ESF2 [Phytophthora nicotianae]) HSP 1 Score: 208.379 bits (529), Expect = 1.648e-61 Identity = 92/190 (48.42%), Postives = 139/190 (73.16%), Query Frame = 0 Query: 140 ITTERPSSSSLAGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERR 329 + +P++S+ G +K E Q++++ RRGVVY++ +PP+MKP K+++L+ K + R+Y+V ED + K+R+ GGN+++KY EGW+EF+DK++AK VA LN +L+GG+K ++YHDDMW +KYL+GFKW HLTEK+AYE R+R+QKLRME+ QAKKEN A++ VE+ K+ E ME R+ Sbjct: 5 VDAAKPNASTANALVGLSREKME-------QFKEKAERRGVVYIARVPPFMKPEKLRYLIGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEARK 187
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|301118671|ref|XP_002907063.1| (pre-rRNA-processing protein ESF2 [Phytophthora infestans T30-4] >gi|262105575|gb|EEY63627.1| pre-rRNA-processing protein ESF2 [Phytophthora infestans T30-4]) HSP 1 Score: 207.994 bits (528), Expect = 2.701e-61 Identity = 98/228 (42.98%), Postives = 151/228 (66.23%), Query Frame = 0 Query: 140 ITTERPSSSSLAGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGRETRKDLRVLRRFRQVAP 367 + +P+++++ A +K E Q++++ RRGVVY++ +PP+MKP K++HLL K + R+Y+V ED + K+R+ GGN+++KY EGW+EF++K++AK VA LN + +GG+K ++YHDDMW +KYL+GFKW HLTEK+AYE R+R+QKLRME+ QAKKEN A++ VE+ K+ E ME R+ + ++G D + + R F Q AP Sbjct: 5 VDAAKPNAATVKALADLSREKME-------QFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEARKADKKQDGHAAKDAMQHIR------------RTFHQKAP 213
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|566030984|gb|ETI53895.1| (hypothetical protein F443_03240 [Phytophthora parasitica P1569]) HSP 1 Score: 207.223 bits (526), Expect = 4.671e-61 Identity = 92/190 (48.42%), Postives = 138/190 (72.63%), Query Frame = 0 Query: 140 ITTERPSSSSLAGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERR 329 + +P++S+ G +K E Q++++ RRGVVY++ +PP+MKP K+++LL K + R+Y+V ED + K+R+ GGN+++KY EGW+EF+DK++AK VA LN +L+GG+K ++YHDDMW +KYL+GFKW HLTEK+AYE +R+QKLRME+ QAKKEN A++ VE+ K+ E ME R+ Sbjct: 5 VDAAKPNASTANALVGLSREKME-------QFKEKAERRGVVYIARVPPFMKPEKLRYLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENHIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEARK 187
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|568056725|gb|ETM53431.1| (hypothetical protein L914_03094 [Phytophthora parasitica]) HSP 1 Score: 207.223 bits (526), Expect = 5.035e-61 Identity = 92/190 (48.42%), Postives = 138/190 (72.63%), Query Frame = 0 Query: 140 ITTERPSSSSLAGPAGPKHDKTERLKREARQYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERR 329 + +P++S+ G +K E Q++++ RRGVVY++ +PP+MKP K+++LL K + R+Y+V ED + K+R+ GGN+++KY EGW+EF+DK++AK VA LN +L+GG+K ++YHDDMW +KYL+GFKW HLTEK+AYE +R+QKLRME+ QAKKEN A++ VE+ K+ E ME R+ Sbjct: 5 VDAAKPNASTANALVGLSREKME-------QFKEKAERRGVVYIARVPPFMKPEKLRYLLGKYGELNRIYLVPEDEALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENHIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEARK 187
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|568026244|gb|ETM00237.1| (hypothetical protein L917_03020 [Phytophthora parasitica]) HSP 1 Score: 205.297 bits (521), Expect = 9.889e-61 Identity = 88/160 (55.00%), Postives = 128/160 (80.00%), Query Frame = 0 Query: 170 QYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERR 329 Q++++ RRGVVY++ +PP+MKP K+++LL K + R+Y+V ED + K+R+ GGN+++KY EGW+EF+DK++AK VA LN +L+GG+K ++YHDDMW +KYL+GFKW HLTEK+AYE R+R+QKLRME+ QAKKEN A++ VE+ K+ E ME R+ Sbjct: 3 QFKEKAERRGVVYIARVPPFMKPEKLRYLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEARK 162
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|695391951|ref|XP_009520186.1| (hypothetical protein PHYSODRAFT_284998 [Phytophthora sojae] >gi|348685083|gb|EGZ24898.1| hypothetical protein PHYSODRAFT_284998 [Phytophthora sojae]) HSP 1 Score: 205.682 bits (522), Expect = 1.690e-60 Identity = 107/257 (41.63%), Postives = 161/257 (62.65%), Query Frame = 0 Query: 147 SSSLAGPAGPKHDKTERLKREAR----QYRDEIARRGVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGRETRKDLRVLRRFRQVAPLRDGGERGVAAREGAEGLTGEGLESGGKKRRR 399 SS+ A PK K + L +R Q++++ RRGVVY++ +PP+MKP K++ LL K + R+Y+V ED + K+R+ GGN+++KY EGW+EF+DK+ AK VA LN + +GG+K ++YHDDMW +KYL+GFKW HLTEK+AYE R+R+QKLRME+ QAKKEN A++ V++ K+ E ME R+ + ++G D + + V R F Q AP + + G GL + ++ K ++R Sbjct: 2 SSTEADAPKPKAVKVKALAGLSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRSLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRQKYTEGWIEFEDKKEAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMEARKADKKQDGDAAHDAMQQ------------VRRTFHQKAPTSSKQNQSL----GENGLLEKVFDASSKNKKR 242
BLAST of EWM26550.1 vs. NCBI_GenBank
Match: gi|1173929272|gb|OQR82533.1| (pre-rRNA-processing protein ESF2 [Achlya hypogyna]) HSP 1 Score: 208.379 bits (529), Expect = 9.149e-60 Identity = 103/190 (54.21%), Postives = 133/190 (70.00%), Query Frame = 0 Query: 179 GVVYLSSLPPYMKPAKVKHLLEKMAPVTRLYMVEEDVTIRKRRIKGGGNKKKKYVEGWVEFQDKRMAKEVAGALNGSLVGGKKHNFYHDDMWVMKYLRGFKWSHLTEKLAYERRVREQKLRMEMLQAKKENAAFVGLVEKKKELEGMEERRRKEGKEGRRRDDEVGEVGEGRETRKDLRVLRR-FRQVAP 367 GVVY+S +PP+MKP KV+HLL + + R+Y+VEED T RK+R+K GGNKK + EGW+EF K +AK VA ALN +GGKK FY+DD+W +KYL+GFKW+HLTEK+AYE RVR+QKLR+E+ QA KENAAF+ VE+ K+L+ MEER++ D V G L +RR FRQ AP Sbjct: 179 GVVYMSRVPPFMKPEKVRHLLSQYGDIERIYLVEEDKTHRKKRLKAGGNKKVNFTEGWIEFSHKSVAKRVAAALNTKPMGGKKRGFYYDDIWNLKYLKGFKWAHLTEKIAYENRVRDQKLRLEIAQAAKENAAFMERVEQSKQLDKMEERKKA---------DNVAVPGA-------LDSIRRTFRQHAP 352 The following BLAST results are available for this feature:
BLAST of EWM26550.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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