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Properties
| Property Name | Value |
|---|
| Product | dna topoisomerase |
| Orig transcript id | gnl|cribi|Naga_100444g1.1594.mrna |
| Orig protein id | gnl|cribi|Naga_100444g1.1594 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:921823..923182 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3668 ID=rna3668|Name=rna3668|organism=Nannochloropsis gaditana|type=mRNA|length=1495bp
GCTGCTCCTGATGCCCTGTTAACCGCAACCTTTCGAACCACATACACGCA
CATAACCCCTCAATCAGCGTTAATGTGTCACATATGCCATATTTTATCTG
GCTCATGTATCCGTGTGGGTCTTTCCACTACGCAAAACCACGTTGAGCGG
GCGCGAGACAAAGGAAGGCTTCCATTCCGATCTCTACGTCTCCCCTGGCA
AGCACGCAGACCAGCTCTGTCATAACATACATGTCTAGTACATCGATTTT
CTACAACCGTTAATCGCGGGAGTACCACCAGTGCGCTCAATCACACATTC
ACCGCCGAGGCTTTTTTCTAACGTGTGAGGAGAGCAGTAAAGAGGTGTCT
TATTTTTAAGCAGCGTCATACGCCAGCGGTACTAGTAGTCGTTGGGCACT
CGAACGTCTCAGACCTCAGCTGCTCCATTTTGGCCCGCACAGCTCCGCTA
TCGATCGACATGCATCCACTGACCAATATGCTACACAGGAATATCACCTT
GACTTCCAAAGTGCCTTACCTCATGCGCGCGAAAGTTGTGAGCTTGAGAG
GTACGTGCACGACCGCGACCTCCTCCCTTCTAGGCGTTCCAAGTCGACCT
CAAGCCCCTTGCGCACGCACATTCAAGCGGATGCGGCCATTTTCCACCAC
TTCGTCCCAGTCATCTGGCGGCAAGGAAACGTCACCACCCGCAGTGCCAG
AGACGCCATTGTATTCTTCTCACATTCCCACAAGCGGCTTTCAGAAACTC
TACATTGCTGGGTTTTCAGCCGCTACCGCTTTCCGCGATCCAGAGCGGGG
TGATATGGTAGCAGCTTTGGGTGAAACAACCGGAACGAGGGCTTTGCAGC
GTCTGAGGCGTGCCATGTCTGCTGACCCTGTGGGACGAGAACTGCTGGCG
GCTAAACCCGACATCAAAGAAGACTCGACGCGTCCAGATCGTCTTCGGAG
ACTCCCCGAAGGTACCTTTGGTCGCGAGTACGCCCGTTTCCTCGACCACC
ACGGCTATTCTCCCGATGAGCGCGCGGCGGTCCGATTCGTGGATGATGCG
GAATTGGCCTTCGTAATGCAACGGTACCGACAAGTGCATGATTTTTGGCA
CGTGTTGTGCGGACTGCCGCCTACAGTTCTGGGAGAGTTGGCGCTAAAGT
GGTTCGAGATGGTCCAAACTCGCTTGCCCATTGCGGCTTTTAGTGGCGTG
GTGGGGCCTTTATCTTTGTCGGCGCAAGAGCGAAAACTTCTTAAGGAGCA
ATATATACCCTGGGCGGTGCGGGCGGCAGTCAAAGCCAGGCCATTAATGT
GCGTCTGGTACGAGCGTAGCTTCGAGGAACCTTTGGAACTGATGCGGAAA
CGACTACAAATCGTAACAGCTCCGCCGATGACGGCTGTGTAATCAATGTG
GGAATTCATAAGTGCACACGGATGCGTCAGGAGTGAAAGCAATGATGTGG
ACCTTTCCAATAGGTCGGACAAGCATGTTTTTGAATCCCTGTGTA back to topprotein sequence of rna3668 >rna3668-protein ID=rna3668-protein|Name=rna3668|organism=Nannochloropsis gaditana|type=polypeptide|length=365bp
MAPVKVLNVAEKPSVAKEISAILSGGNRAPRRRQGGSDYNPIWEFGCQIR
GELVDMVFTSVRGHLLEMEFVEPYCKNWHACRPGDLFTIPVEKKVGKDKE
SLERCLKSEARVCQRLILWLDCDLEGENIAFEVMDVCRAANSRLRVERAR
FSALIPREIWHALEHLVEPNVYQSEAVNARMEIDLRIGAAFTRFQTLKLQ
GKFDGVEDSIISYGPCQFPTMGFVVDRYKAIESFQREEFWRIQMAYRGGR
EDGDGGPQGITRFQWKRERLFDEAACAVLYVMVVEAKEARVTHVNAAPAT
RDRPLPLSTVELQKKASRLGQGGRKGGRGKGIGKKGEWEERRWRRMRGAS
SGTWGRANFGARYIS back to topmRNA from alignment at CM002461.1:921823..923182+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3668 ID=rna3668|Name=rna3668|organism=Nannochloropsis gaditana|type=mRNA|length=1360bp|location=Sequence derived from alignment at CM002461.1:921823..923182+ (Nannochloropsis gaditana)
CTAACAggcaaagaggaaagggccaATGAACTGCATATTTCAATCTTCTC
TACTGCTGTAACGTGTGCTAGTGATGACTTAGCTTGCGCATCACCTGCCT
TGCATTTTCCGCGGCCATCTATCGTgttctacctcctctctacttccctc
ctccctcacctcgtcCCATCCGCCGACGGTTTGAACTTCATCGGACCGAC
GTGCGAAGGGCCTGATTGTAATCTGCTATTCGCTTCTTCGAATTGGTTCC
CCGTGCAAATACATGGCACCCGTCAAGGTCTTGAATGTGGCCGAAAAACC
TAGCGTGGCGAAAGAAATCTCTGCCATACTCTCTGGCGGCAACCGTGCCC
CACGTCGTCGCCAAGGGGGATCTGACTACAATCCAATATGGGAATTCGGC
TGTCAAATACGTGGAGAGCTTGTGGATATGGTGTTTACCTCGGTCCGAGG
CCACCTCTTGGAGATGGAATTCGTGGAACCCTACTGCAAGAATTGGCATG
CCTGTCGCCCGGGGGACCTGTTCACGATCCCCGTGGAGAAAAAAGTGGGC
AAGGACAAAGAGAGTTTGGAAAGATGCTTGAAATCCGAAGCAAGGGTGTG
CCAGCGGCTGATCTTGTGGCTGGACTGCGatttggaaggggaaaacatTG
CCTTTGAGGTGATGGACGTGTGTCGGGCCGCGAACTCGCGTTTGCGGGTG
GAACGTGCCCGTTTCTCCGCTCTCATTCCCCGAGAAATCTGGCACGCCCT
CGAACACCTCGTGGAACCCAATGTGTACCAATCGGAAGCCGTCAATGCCC
GGATGGAAATCGATTTACGGATCGGTGCTGCTTTCACCCGCTTCCAGACC
CTGAAACTCCAAGGGAAGTTCGACGGGGTCGAGGACTCTATCATTTCGTA
TGGTCCCTGCCAATTTCCCACGATGGGTTTTGTGGTCGATCGGTACAAAG
CGATCGAGTCGttccagagggaggagtttTGGCGGATCCAAATGGCGTac
cggggggggcgtgaagacggggacgggggccCACAGGGAATCACCCGCTT
TCAATGGAAGCGGGAGAGGTTGTTCGACGAGGCGGCTTGTGCGGTTTTGT
acgtgatggtggtggaagcCAAAGAGGCGCGGGTCACACACGTGAATGCC
GCGCCGGCCACCCGCGATCGACCGCTGCCCTTGTCGACCGTTGAGCTGCA
GAAGAAAGCGTCCAGGttggggcagggagggaggaagggcgggcggggca
aggggataggaaagaaaggagagtgggaggagagacgaTGGAGGCGTATG
AGGGGGGCTTCATCAGGAACCTGGGGAAGAGCTAATTTTGGAGCGCGGTA
CATAAGTTAA back to topCoding sequence (CDS) from alignment at CM002461.1:921823..923182+ >rna3668 ID=rna3668|Name=rna3668|organism=Nannochloropsis gaditana|type=CDS|length=1098bp|location=Sequence derived from alignment at CM002461.1:921823..923182+ (Nannochloropsis gaditana)
ATGGCACCCGTCAAGGTCTTGAATGTGGCCGAAAAACCTAGCGTGGCGAA
AGAAATCTCTGCCATACTCTCTGGCGGCAACCGTGCCCCACGTCGTCGCC
AAGGGGGATCTGACTACAATCCAATATGGGAATTCGGCTGTCAAATACGT
GGAGAGCTTGTGGATATGGTGTTTACCTCGGTCCGAGGCCACCTCTTGGA
GATGGAATTCGTGGAACCCTACTGCAAGAATTGGCATGCCTGTCGCCCGG
GGGACCTGTTCACGATCCCCGTGGAGAAAAAAGTGGGCAAGGACAAAGAG
AGTTTGGAAAGATGCTTGAAATCCGAAGCAAGGGTGTGCCAGCGGCTGAT
CTTGTGGCTGGACTGCGatttggaaggggaaaacatTGCCTTTGAGGTGA
TGGACGTGTGTCGGGCCGCGAACTCGCGTTTGCGGGTGGAACGTGCCCGT
TTCTCCGCTCTCATTCCCCGAGAAATCTGGCACGCCCTCGAACACCTCGT
GGAACCCAATGTGTACCAATCGGAAGCCGTCAATGCCCGGATGGAAATCG
ATTTACGGATCGGTGCTGCTTTCACCCGCTTCCAGACCCTGAAACTCCAA
GGGAAGTTCGACGGGGTCGAGGACTCTATCATTTCGTATGGTCCCTGCCA
ATTTCCCACGATGGGTTTTGTGGTCGATCGGTACAAAGCGATCGAGTCGt
tccagagggaggagtttTGGCGGATCCAAATGGCGTaccggggggggcgt
gaagacggggacgggggccCACAGGGAATCACCCGCTTTCAATGGAAGCG
GGAGAGGTTGTTCGACGAGGCGGCTTGTGCGGTTTTGTacgtgatggtgg
tggaagcCAAAGAGGCGCGGGTCACACACGTGAATGCCGCGCCGGCCACC
CGCGATCGACCGCTGCCCTTGTCGACCGTTGAGCTGCAGAAGAAAGCGTC
CAGGttggggcagggagggaggaagggcgggcggggcaaggggataggaa
agaaaggagagtgggaggagagacgaTGGAGGCGTATGAGGGGGGCTTCA
TCAGGAACCTGGGGAAGAGCTAATTTTGGAGCGCGGTACATAAGTTAA back to top
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