Naga_100444g1, gene3533 (gene) Nannochloropsis gaditana

Overview
NameNaga_100444g1
Unique Namegene3533
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:921823..923182 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100444g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:921823..923182 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G03560NO07G03560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3668rna3668-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3668rna3668Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3668

>rna3668-protein ID=rna3668-protein|Name=rna3668|organism=Nannochloropsis gaditana|type=polypeptide|length=365bp
MAPVKVLNVAEKPSVAKEISAILSGGNRAPRRRQGGSDYNPIWEFGCQIR
GELVDMVFTSVRGHLLEMEFVEPYCKNWHACRPGDLFTIPVEKKVGKDKE
SLERCLKSEARVCQRLILWLDCDLEGENIAFEVMDVCRAANSRLRVERAR
FSALIPREIWHALEHLVEPNVYQSEAVNARMEIDLRIGAAFTRFQTLKLQ
GKFDGVEDSIISYGPCQFPTMGFVVDRYKAIESFQREEFWRIQMAYRGGR
EDGDGGPQGITRFQWKRERLFDEAACAVLYVMVVEAKEARVTHVNAAPAT
RDRPLPLSTVELQKKASRLGQGGRKGGRGKGIGKKGEWEERRWRRMRGAS
SGTWGRANFGARYIS
back to top
Synonyms
Publications