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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101019g2.8722.mrna |
| Orig protein id | gnl|cribi|Naga_101019g2.8722 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:177972..179559 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3348 ID=rna3348|Name=rna3348|organism=Nannochloropsis gaditana|type=mRNA|length=756bp
ATGGAAGTGGTCTCCGCTGCCATTTCTGCGTCTTCTGCCGCTCCCAGCAC
GACTGGAGGAGGAGGAAACACGGCTGCACCCTCTGATGCTGTTCTTTCAG
AAGTAGGAGTCATCATTGAGAAGCTCTTGGCCGTGCGAGGGACGCGTCAG
TCGAGTAACATGCAGGTAACCCTGACCGAAGACGAGGTAAAAATGCTGTG
TCAACGGTCGCGGGAAATCTTTCTCACTCAGCCCATCCTCATCGAAGTGG
AAGCCCCCGTCAAGATCTGCGGAGACCTCCACGGCCAGTATTACGACCTG
TTACGCCTGTTTGAATACGGGGGCTACCCACCGGAGAGCAATTATCTTTT
TCTTGGCGATTACGTGGACCGAGGCAAGCAATCGCTTGAGACGATCTGCC
TCCTCCTCGCGTACAAGATCATGTACCCCGAGAATTTCTTCATCCTCCGA
GGGAACCATGAATGTGCCTCCGTGAACCGGATCTACGGCTTCTACGACGA
ATGCAAACGTCGGTACAACATCAAACTCTGGAAGACTTTCACGGATTGTT
TCAATTGTCTCCCTGTCGCTGCCATTGTTGATGGCAAAATTTTCTGCATG
CATGGTGGCTTGAGCCCCGAACTCCATCACATGGACCAGATCCGGCGCCT
TCCCCGCCCCACCGACGTGCCTGACACTGGAACGAGAGGGGCGTCTCCTT
CACTTTTGGAGAAGACATTGTCAGGTCTTTTCTCAAGCGACACGACCTCG
ACCTGA back to topprotein sequence of rna3348 >rna3348-protein ID=rna3348-protein|Name=rna3348|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MPRRTGKRSLVAGADGDSNTCSSTARLQRMIQDGETYEALQTARALFARL
DGAPVSAANPGRKKGAEARVMVLHVARTLAEVGEYQSVLDLARLYMANNA
SLRKQAMPTGHTVPQVEEMSAEEAGTWSPSGDTKEAVEEGGEGDDPAWEA
HRFHTGGRTAMLSLARLLPPASKERVALLKGLTRWAAEEEEAEEGGKEVL
ELGLELAKAYSARGEWARAAQQHGELARQCTGPDADTLAASYVQVLEAWS
AEGYAGEKDLFLARAVLHGLGTSSYAVLGALPFARALMTAAQASSAFAPC
LETSPLLHYVGLVVALLGARAGEGGREGGREGGKEGEVFQLLSSRYQPAL
RRDPALEKLVGRIGEGGFGLSPASNPMQAFLSSMLG back to topmRNA from alignment at CM002461.1:177972..179559+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3348 ID=rna3348|Name=rna3348|organism=Nannochloropsis gaditana|type=mRNA|length=1588bp|location=Sequence derived from alignment at CM002461.1:177972..179559+ (Nannochloropsis gaditana)
GCGCTCTCCTCAAATGTCTTTCACGCCATGCTTCCTGCTTGGTTGACCGC
TCCCCCTGCCCGTGTACCCCCCTATCTGCCAAAGTGGCTGACAGGCCAAG
TCCATGTTTACCCTGCAAAGGTTGTCAGGCCTTTCATTTAAAAATGTACA
GAGTCAGTTTTCCTTGTCGTGCCTTCATGCAAGGGAAGTCGGGCCCAATA
TATCTCTTTCGGCAAGATGATGCCAGGTTGcaccttcgtcttcctcgaaG
CTCCCGCTTATGCTTCAAAGTCTCGACTTTCACAGGGTAATTAGATCCAG
GAAGGCGCAAGCAAAGCTTGGTGCCCAAGGGGCTGTGAGGCGATTTTTCT
GACTCGAGATCGTTGCCATTGCGCAATCGGAGCATAGTTTCTCACGCCCC
GGTCGTGCATTCTTTTATTGTGGAAGTATCATGCCCCGTCGCACTGGGAA
ACGCAGCCTCGTGGCTGGAGCCGATGGAGACTCCAACACCTGCAGCTCCA
CGGCCCGCCTGCAACGAATGATCCAAGACGGAGAGACCTACGAAGCCTTA
CAGACAGCCAGAGCTCTCTTTGCCCGCTTGGACGGTGCCCCTGTCTCTGC
CGCCAACCccgggaggaaaaaaggcgccGAGGCACGCGTCATGGTCTTAC
ACGTGGCTCGTACACTCGCAGAGGTGGGCGAGTACCAGTCGGTGCTAGAC
TTGGCGCGGTTGTACATGGCCAACAATGCCTCCCTGAGGAAACAGGCCAT
GCCGACGGGGCACACCGTTCCCCAAGTGGAAGAAAtgagcgcggaggaag
caggaaccTGGTCCCCGTCGGGAGATAccaaggaagcggtggaagaagga
ggggagggagacgacccTGCCTGGGAGGCCCACCGATTCCACACGGGGGG
TCGAACGGCCATGCTTTCCTtggcccgcctgctcccgcccGCATCGAAGG
AACGCGTGGCCTTGCTCAAGGGGTTGACCCGGTGggccgccgaggaggag
gaggcggaggagggagggaaggaagtcttGGAGCTGGGCTTGGAGTTGGC
CAAGGCGTACAGTGCGAGGGGCGAGTGGGCTCGGGCGGCCCAACAACACG
GGGAGCTGGCTCGGCAGTGCACAGGGCCGGATGCGGATACCTTGGCGGCG
TCGTATGTGCAGGTGCTGGAAGCTTGGAGCGCGGAAGGCTATGCGGGTGA
GAAGGATTTGTTCCTCGCCCGTGCGGTTTTGCACGGATTGGGCACCTCTT
CCTATGCCGTCTTGGGggccctcccctttgcccgGGCTTTGATGACGGCG
GCCCAAGCCTCCTCGGCCTTTGCGCCCTGCTTGGAGACGAGTCCCTTGCT
GCATTACGtgggcctggtggtggctTTGTTGGGAGCgcgggccggggagg
gagggagggagggagggagggagggagggaaggagggcgaggtcttTCAA
CTCCTGTCCTCCCGGTACCAGCCCGCGCTGCGCCGGGACCCGGCGCTGGA
AAAATTGGTGGGCCgcatcggggagggaggctttggTCTGTCCCCTGCCT
CTAATCCGATGCAAGCCTTCCTGTCGAGCATGCTAGGC back to topCoding sequence (CDS) from alignment at CM002461.1:177972..179559+ >rna3348 ID=rna3348|Name=rna3348|organism=Nannochloropsis gaditana|type=CDS|length=1158bp|location=Sequence derived from alignment at CM002461.1:177972..179559+ (Nannochloropsis gaditana)
ATGCCCCGTCGCACTGGGAAACGCAGCCTCGTGGCTGGAGCCGATGGAGA
CTCCAACACCTGCAGCTCCACGGCCCGCCTGCAACGAATGATCCAAGACG
GAGAGACCTACGAAGCCTTACAGACAGCCAGAGCTCTCTTTGCCCGCTTG
GACGGTGCCCCTGTCTCTGCCGCCAACCccgggaggaaaaaaggcgccGA
GGCACGCGTCATGGTCTTACACGTGGCTCGTACACTCGCAGAGGTGGGCG
AGTACCAGTCGGTGCTAGACTTGGCGCGGTTGTACATGGCCAACAATGCC
TCCCTGAGGAAACAGGCCATGCCGACGGGGCACACCGTTCCCCAAGTGGA
AGAAAtgagcgcggaggaagcaggaaccTGGTCCCCGTCGGGAGATAcca
aggaagcggtggaagaaggaggggagggagacgacccTGCCTGGGAGGCC
CACCGATTCCACACGGGGGGTCGAACGGCCATGCTTTCCTtggcccgcct
gctcccgcccGCATCGAAGGAACGCGTGGCCTTGCTCAAGGGGTTGACCC
GGTGggccgccgaggaggaggaggcggaggagggagggaaggaagtcttG
GAGCTGGGCTTGGAGTTGGCCAAGGCGTACAGTGCGAGGGGCGAGTGGGC
TCGGGCGGCCCAACAACACGGGGAGCTGGCTCGGCAGTGCACAGGGCCGG
ATGCGGATACCTTGGCGGCGTCGTATGTGCAGGTGCTGGAAGCTTGGAGC
GCGGAAGGCTATGCGGGTGAGAAGGATTTGTTCCTCGCCCGTGCGGTTTT
GCACGGATTGGGCACCTCTTCCTATGCCGTCTTGGGggccctcccctttg
cccgGGCTTTGATGACGGCGGCCCAAGCCTCCTCGGCCTTTGCGCCCTGC
TTGGAGACGAGTCCCTTGCTGCATTACGtgggcctggtggtggctTTGTT
GGGAGCgcgggccggggagggagggagggagggagggagggagggaggga
aggagggcgaggtcttTCAACTCCTGTCCTCCCGGTACCAGCCCGCGCTG
CGCCGGGACCCGGCGCTGGAAAAATTGGTGGGCCgcatcggggagggagg
ctttggTCTGTCCCCTGCCTCTAATCCGATGCAAGCCTTCCTGTCGAGCA
TGCTAGGC back to top
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