Naga_101019g2, gene3224 (gene) Nannochloropsis gaditana

Overview
NameNaga_101019g2
Unique Namegene3224
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:177972..179559 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_101019g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:177972..179559 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL132ngnoL132Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00790NO07G00790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3348rna3348-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3348rna3348Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3348

>rna3348-protein ID=rna3348-protein|Name=rna3348|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MPRRTGKRSLVAGADGDSNTCSSTARLQRMIQDGETYEALQTARALFARL
DGAPVSAANPGRKKGAEARVMVLHVARTLAEVGEYQSVLDLARLYMANNA
SLRKQAMPTGHTVPQVEEMSAEEAGTWSPSGDTKEAVEEGGEGDDPAWEA
HRFHTGGRTAMLSLARLLPPASKERVALLKGLTRWAAEEEEAEEGGKEVL
ELGLELAKAYSARGEWARAAQQHGELARQCTGPDADTLAASYVQVLEAWS
AEGYAGEKDLFLARAVLHGLGTSSYAVLGALPFARALMTAAQASSAFAPC
LETSPLLHYVGLVVALLGARAGEGGREGGREGGKEGEVFQLLSSRYQPAL
RRDPALEKLVGRIGEGGFGLSPASNPMQAFLSSMLG
back to top
Synonyms
Publications