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Properties
| Property Name | Value |
|---|
| Product | asparaginyl-trna synthetase |
| Orig transcript id | gnl|cribi|Naga_100026g49.10646.mrna |
| Orig protein id | gnl|cribi|Naga_100026g49.10646 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:683737..686106 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna267 ID=rna267|Name=rna267|organism=Nannochloropsis gaditana|type=mRNA|length=1866bp
CAATTGAATGGCACAGGGCGGAAAGTGTTGTCGGGCGAGTTTCATGCGAG
CAAAGAGGGTCGCAATAATGCCAACCTGGTCCAAGACTCTCGTGCTAGCA
GCGGCGACTGGAATCTCCTGCAGCTGTAAAAGTAGCATCACAGCAGCCGC
CTTCAGCGTCCTTGGGCCGAGATCAATTCAACAAAGCGGTTGGACATGCA
GAGACTGGGGTACGGCAAGAGCGAGGACGAAAGATAGTCTCTTGCCGCTC
TACTCCATTCGCACCGGCGGGGCGGGTACTCCTGGAATGGACGATGAGAA
GACGGGATATGGACCTGAGTTGATCGAGGACCCTGATGCCGCCTTGACCC
CCGAGGAGTGGGAGAAGAAGTATGGAGAAGAGGTGGACACCACAGTCCTC
TACGATGAGAAGGATCTGGAACGGAGAAGGATTGATGCCATCCGTGTGGC
GAAGTATATGGATGTAATGGATTCCCCTAAAGTGGGAGAGCCGCACCCAC
GCGTCGCGCTTGCCGCGCGTGCTTACAAGAAGAAAGACATCAAGCGGCTT
ACACACGGTATGCTGTACCGCAAACTCGGGAAAAGCGATCTGATAGTGTC
GGAAGTGGCCCTCGGGACCATGACATGGGGCGAGCAGGTCACAGAGGAGC
AGGCGCATGCCCAGCTGAACATGGCTTTCGACGAGTACGGTGTGAACTTG
ATAGACACAGCCGAACTATATCCTGTCCCTGCTGACCCGGATACCCATGG
ATTGAGCGAGAAGATCATTGGCTCATGGCTCAAGAAGAGGAATCGCGAAG
ATGTCATTCTGGCGACGAAGGTGACGGGCTACAGCGACGTTTTGACGTGG
TTGCGAGAGGACGGGGGGCCCGTCCGGCTGACCGCAGGGCAGATCACCGA
GGCGATTGAGGGAAGCCTACGGCGTCTAGGTACCGATTATATTGACCTGG
CACAGTTACACTGGCCTGACCGCTATTTGAATCTCTTCGGCGTTGACTTG
TACGATCAATCGCGTGAGCGTGAGGATGTGGTCAGCTTTGAGGAACAACT
GACTGCGCTAGGCAAGCTTGTCAAAGCGGGTAAAATTCGGTACATTGGTT
TGAGCAACGAGAGTCCTTATGGTGTCATGAAATTTCTTGAAACGGCGCGT
CGACTAGGTCTGCAGGAAGTTGTCTCCGTGCAAAACTGTTACAACCTGCT
TTACCGCAACGAGATGGACATGGGCCTGTCCGAGATCTGCTCCCCGAGTC
ACGAGGATTTAGGCGTTCTCTGCTACTCTCCTCTGGCTGGCGGTGTCCTC
TCTGGCAAATACATGTTCAAGGGACGCGCATCTGAGGCCCGTTTGAACCG
ATTCCCGGGATACATGGCGCGCTATCGTACGTTGCAGAGTCAAGACTGTG
TTTTCGAGTACAAAGAAATTGCCTCCCGGTATGGCCTGACGATGGCTCAG
CTAGCATTAGGATGGGTATACTCGCGGCCGTTTGTGACGTCAACTATAGT
GGGCGCCACGTCGGTGGATCAACTTCGTGAAAACTTAGATGCCTTGAACA
CGCCAATTTTCTCTAATGTGGTGCACGATCTGTCAGAGGTCTTCATGCGC
TACAGGGACCCTAGTCGAACATTCGCGCGCGTTCTTGACGATGGGGACAC
AGGTACAGATGAGCGGCAGAGATAAAGTAAGTCAGATTTTTATGATTTTT
ATCTTAGGAAGTGTGCTCCAACAGAAGGATGGTTCTAGTTCTTCAAAGGT
GCCTTTCTCCGGGTTGGACTTCTGCAACTTGTAGTATACGGGAGGGCGGG
CGTCCAAAAAAAACGGATAAGACCGAAGATTGAAAAGTAAAAGCATAGAA
GAAATTGCATGTTCCA back to topprotein sequence of rna267 >rna267-protein ID=rna267-protein|Name=rna267|organism=Nannochloropsis gaditana|type=polypeptide|length=583bp
MVLGTRKGTSSCFCLSLTNLITVTMFSCAAIANSRHQAQTAAFGSLLAKV
PTKSSRTSPRRLLAPCAFTQAPSCRPPRLLVSPVSTSTTLYVSSSTAAPS
TSTATTVPARLKVRDILINGDDSLIGQRVTVKGWTRTIRSQKTFSFIEIN
DGSSLGGLQVVADAEKVCDYEAVLSKIHTGAALGVVGVIKASPGKGQKYE
VAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRS
ALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRV
EGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENS
QTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFF
EKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDF
GTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMDLL
VPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSG
YGLGFERLVCYVTGVENIREAIAFPRTPGSATF back to topmRNA from alignment at CM002455.1:683737..686106+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna267 ID=rna267|Name=rna267|organism=Nannochloropsis gaditana|type=mRNA|length=2370bp|location=Sequence derived from alignment at CM002455.1:683737..686106+ (Nannochloropsis gaditana)
CCTTACTGCCTCTTACATCCCCAAACGCACAGATTGAACAGTTCTCAAAG
GTCGTCCTCCTTTATTAAGGAAGCTCAAATTTGTGCTACTTACCAAGTGC
CACTGGGCTGGTAAATCACACTGGGAATTCGATAATTTAGCTCCCGTCGC
TCCTTGGTAGAAGTAGCACCTGTGCAGACGAGCCTCTTGGAAATGGTTTT
GGGGACTCGCAAAGGCACCTCGTCTTGCTTTTGCCTGTCCTTGACAAACT
TGATAACAGTAACTATGTTTTCTTGCGCTGCGATAGCCAATTCTCGACAC
CAGGTAAATAATTTGGGGAAAATCACTGTGGCGGGAAGCACGCGTACGTG
TCTCTCTGGGCACCGCCCAGAAGTTTCAGATGACGGTCAAGACGCCGGAC
CATGTCTCCGGCACCCGAATCCTACTCTTTGTCTGATATGAAATGCAAAT
CGAATTTATCTGAACCTGACTGAGACAGGCACAGACGGCCGCTTTCGGCT
CGCTTTTGGCCAAGGTGCCGACCAAATCCTCGCGGacatctcctcgtcgt
ctgcTCGCTCCCTGCGCGTTCACGCAGGCCCCCTCGTGCCGCCCACCACG
GTTATTGGTGTCGCCTGTCTCAACCTCTACGACCCTCTACGTCTCAAGTA
GCACTGCTGCACCCAGTACTTCCACCGCAACCACCGTGCCAGCCCGTTTG
AAAGTCCGGGACATATTGATCAACGGCGACGACAGTTTGATCGGGCAACG
CGTCACGGTCAAGGGATGGACCCGCACAATTCGCTCGCAAAAAACCTTCA
GTTTCATCGAAATAAATGAcggctcctccttggggGGGTTGCAAGTGGTG
GCGGACGCGGAGAAGGTCTGCGACTACGAGGCCGTCCTCTCCAAGATACA
CACAGGGGCTGCCCTGGGTGTCGTGGGCGTGATCAAGGCGAGCCCAGGAA
AGGGCCAAAAGTATGAAGTCGCAGCGgagagcgtggaggtggTCGGGGGC
TGCGATCCGGAGGCCTACCCTCTCCAGAAGAAGCGCCACACGCTCGAGTT
CCTCAGGGGGATCGCCCACCTGCGACCACGCACCAACACCctggccgccg
tggcccgcGTCCGGTCCGCCCTGGCTTTTGCCACGCACAATTTTTTCCAG
GAGCAGGGATTCTACTACCTGCAGAGCCCTATCATCACGGCCTCTGACTG
CGAGGGCGCCGGCGAGATGTTCCGAGTCACCACCTTGCCGGACAAGGTTT
CGGAGTTGCcgcgggtggaaggggaggaggatcgcATCGACTACTCCCAC
GATTTCTTTGGTGCCCCCGCCTACCTGACCGTGTCGGGGCAGCTCTCGGG
GGAGGCCTACGCGTGCGCCATGGGGGATGTGTACACGTTCGGACCCACCT
TCCGGGCCGAGAACAGCCAGACCACGCGGCACTTGGCCGAGTTCAACATG
ATCGAGCCCGAGATGGCGTTCGCAGACTTGCAAGACAACATGCGCAACGC
CGAAGCCTATGTGAAGGCCATCGTCAGGCATGTGCTCAAGGAATGCGAGG
AGGATCTCGCCTTCTTCGAGAAATTTTACGACAAGACCCTCATGGCGCGG
CTGAACACGGTGAGAGTTTGGGACCTTTTTTCGGAaggtgtgggaggaga
acgaTCATTATGGCCTGCCGGCTTCACCGACACTTGCAAAAGCGACACAT
CATTCCATTGGAATCTCCTCGCCGACACCGTTCACCCATTTTTCTCACCA
agtcatctccctccctcccttcctccctccctccagctcgtCTCCGAGTC
CTTCGCGCGCGTCGAATACACGGAAGCCGTACGTCTCCTCCAGGAAGAGA
TCGCGAAGGACAGAGGCGCTTGGCAGTTCCCAGACGTCGACTTCGGGACG
GACCTGCAGACGGAGCACGAGCGTTGGCTGTGTGAGAAAAAATTCCAACG
AGCCACCTTTGTGTATAACTACCCGCGCGAGATAAAGGCTTTCTACATGC
GCGAcaacgaggacgggaaaacggtggcggcgatggatCTGCTCGTCCCT
GGCGTCGGAGAGTTGATCGGAGGTtcgcagagggaggagaggctggGGAG
GCTGGAGGCGAAGCTAGAAGAGTTTGGACTAGACAAGGAGGACTACTGGT
GGTATTTAGATCTCAGGCGCTTCGGGAGTGTGCCACACTCCGGCTACGGA
CTGGGCTTCGAGAGGCTCGTGTGCTACGTCACGGGGGTGGAAAACATTCG
GGAAGCGATCGCCTTCCCTCGGACGCCGGGAAGCGCAACGTTTTGAAATG
GGTGGCGGGAATATAGATTGCAAAACcccggcgaaggaggagagaaagac
cATTCGCATAGACCAATTGC back to topCoding sequence (CDS) from alignment at CM002455.1:683737..686106+ >rna267 ID=rna267|Name=rna267|organism=Nannochloropsis gaditana|type=CDS|length=5256bp|location=Sequence derived from alignment at CM002455.1:683737..686106+ (Nannochloropsis gaditana)
ATGGTTTTGGGGACTCGCAAAGGCACCTCGTCTTGCTTTTGCCTGTCCTT
GACAAACTTGATAACAGTAACTATGTTTTCTTGCGCTGCGATAGCCAATT
CTCGACACCAGGCACAGACGGCCGCTTTCGGCTCGCTTTTGGCCAAGGTG
CCGACCAAATCCTCGCGGacatctcctcgtcgtctgcTCGCTCCCTGCGC
GTTCACGCAGGCCCCCTCGTGCCGCCCACCACGGTTATTGGTGTCGCCTG
TCTCAACCTCTACGACCCTCTACGTCTCAAGTAGCACTGCTGCACCCAGT
ACTTCCACCGCAACCACCGTGCCAGCCCGTTTGAAAGTCCGGGACATATT
GATCAACGGCGACGACAGTTTGATCGGGCAACGCGTCACGGTCAAGGGAT
GGACCCGCACAATTCGCTCGCAAAAAACCTTCAGTTTCATCGAAATAAAT
GAcggctcctccttggggGGGTTGCAAGTGGTGGCGGACGCGGAGAAGGT
CTGCGACTACGAGGCCGTCCTCTCCAAGATACACACAGGGGCTGCCCTGG
GTGTCGTGGGCGTGATCAAGGCGAGCCCAGGAAAGGGCCAAAAGTATGAA
GTCGCAGCGgagagcgtggaggtggTCGGGGGCTGCGATCCGGAGGCCTA
CCCTCTCCAGAAGAAGCGCCACACGCTCGAGTTCCTCAGGGGGATCGCCC
ACCTGCGACCACGCACCAACACCctggccgccgtggcccgcGTCCGGTCC
GCCCTGGCTTTTGCCACGCACAATTTTTTCCAGGAGCAGGGATTCTACTA
CCTGCAGAGCCCTATCATCACGGCCTCTGACTGCGAGGGCGCCGGCGAGA
TGTTCCGAGTCACCACCTTGCCGGACAAGGTTTCGGAGTTGCcgcgggtg
gaaggggaggaggatcgcATCGACTACTCCCACGATTTCTTTGGTGCCCC
CGCCTACCTGACCGTGTCGGGGCAGCTCTCGGGGGAGGCCTACGCGTGCG
CCATGGGGGATGTGTACACGTTCGGACCCACCTTCCGGGCCGAGAACAGC
CAGACCACGCGGCACTTGGCCGAGTTCAACATGATCGAGCCCGAGATGGC
GTTCGCAGACTTGCAAGACAACATGCGCAACGCCGAAGCCTATGTGAAGG
CCATCGTCAGGCATGTGCTCAAGGAATGCGAGGAGGATCTCGCCTTCTTC
GAGAAATTTTACGACAAGACCCTCATGGCGCGGCTGAACACGctcgtCTC
CGAGTCCTTCGCGCGCGTCGAATACACGGAAGCCGTACGTCTCCTCCAGG
AAGAGATCGCGAAGGACAGAGGCGCTTGGCAGTTCCCAGACGTCGACTTC
GGGACGGACCTGCAGACGGAGCACGAGCGTTGGCTGTGTGAGAAAAAATT
CCAACGAGCCACCTTTGTGTATAACTACCCGCGCGAGATAAAGGCTTTCT
ACATGCGCGAcaacgaggacgggaaaacggtggcggcgatggatCTGCTC
GTCCCTGGCGTCGGAGAGTTGATCGGAGGTtcgcagagggaggagaggct
ggGGAGGCTGGAGGCGAAGCTAGAAGAGTTTGGACTAGACAAGGAGGACT
ACTGGTGGTATTTAGATCTCAGGCGCTTCGGGAGTGTGCCACACTCCGGC
TACGGACTGGGCTTCGAGAGGCTCGTGTGCTACGTCACGGGGGTGGAAAA
CATTCGGGAAGCGATCGCCTTCCCTCGGACGCCGGGAAGCGCAACGTTTT
GAATGGTTTTGGGGACTCGCAAAGGCACCTCGTCTTGCTTTTGCCTGTCC
TTGACAAACTTGATAACAGTAACTATGTTTTCTTGCGCTGCGATAGCCAA
TTCTCGACACCAGGCACAGACGGCCGCTTTCGGCTCGCTTTTGGCCAAGG
TGCCGACCAAATCCTCGCGGacatctcctcgtcgtctgcTCGCTCCCTGC
GCGTTCACGCAGGCCCCCTCGTGCCGCCCACCACGGTTATTGGTGTCGCC
TGTCTCAACCTCTACGACCCTCTACGTCTCAAGTAGCACTGCTGCACCCA
GTACTTCCACCGCAACCACCGTGCCAGCCCGTTTGAAAGTCCGGGACATA
TTGATCAACGGCGACGACAGTTTGATCGGGCAACGCGTCACGGTCAAGGG
ATGGACCCGCACAATTCGCTCGCAAAAAACCTTCAGTTTCATCGAAATAA
ATGAcggctcctccttggggGGGTTGCAAGTGGTGGCGGACGCGGAGAAG
GTCTGCGACTACGAGGCCGTCCTCTCCAAGATACACACAGGGGCTGCCCT
GGGTGTCGTGGGCGTGATCAAGGCGAGCCCAGGAAAGGGCCAAAAGTATG
AAGTCGCAGCGgagagcgtggaggtggTCGGGGGCTGCGATCCGGAGGCC
TACCCTCTCCAGAAGAAGCGCCACACGCTCGAGTTCCTCAGGGGGATCGC
CCACCTGCGACCACGCACCAACACCctggccgccgtggcccgcGTCCGGT
CCGCCCTGGCTTTTGCCACGCACAATTTTTTCCAGGAGCAGGGATTCTAC
TACCTGCAGAGCCCTATCATCACGGCCTCTGACTGCGAGGGCGCCGGCGA
GATGTTCCGAGTCACCACCTTGCCGGACAAGGTTTCGGAGTTGCcgcggg
tggaaggggaggaggatcgcATCGACTACTCCCACGATTTCTTTGGTGCC
CCCGCCTACCTGACCGTGTCGGGGCAGCTCTCGGGGGAGGCCTACGCGTG
CGCCATGGGGGATGTGTACACGTTCGGACCCACCTTCCGGGCCGAGAACA
GCCAGACCACGCGGCACTTGGCCGAGTTCAACATGATCGAGCCCGAGATG
GCGTTCGCAGACTTGCAAGACAACATGCGCAACGCCGAAGCCTATGTGAA
GGCCATCGTCAGGCATGTGCTCAAGGAATGCGAGGAGGATCTCGCCTTCT
TCGAGAAATTTTACGACAAGACCCTCATGGCGCGGCTGAACACGctcgtC
TCCGAGTCCTTCGCGCGCGTCGAATACACGGAAGCCGTACGTCTCCTCCA
GGAAGAGATCGCGAAGGACAGAGGCGCTTGGCAGTTCCCAGACGTCGACT
TCGGGACGGACCTGCAGACGGAGCACGAGCGTTGGCTGTGTGAGAAAAAA
TTCCAACGAGCCACCTTTGTGTATAACTACCCGCGCGAGATAAAGGCTTT
CTACATGCGCGAcaacgaggacgggaaaacggtggcggcgatggatCTGC
TCGTCCCTGGCGTCGGAGAGTTGATCGGAGGTtcgcagagggaggagagg
ctggGGAGGCTGGAGGCGAAGCTAGAAGAGTTTGGACTAGACAAGGAGGA
CTACTGGTGGTATTTAGATCTCAGGCGCTTCGGGAGTGTGCCACACTCCG
GCTACGGACTGGGCTTCGAGAGGCTCGTGTGCTACGTCACGGGGGTGGAA
AACATTCGGGAAGCGATCGCCTTCCCTCGGACGCCGGGAAGCGCAACGTT
TTGAATGGTTTTGGGGACTCGCAAAGGCACCTCGTCTTGCTTTTGCCTGT
CCTTGACAAACTTGATAACAGTAACTATGTTTTCTTGCGCTGCGATAGCC
AATTCTCGACACCAGGCACAGACGGCCGCTTTCGGCTCGCTTTTGGCCAA
GGTGCCGACCAAATCCTCGCGGacatctcctcgtcgtctgcTCGCTCCCT
GCGCGTTCACGCAGGCCCCCTCGTGCCGCCCACCACGGTTATTGGTGTCG
CCTGTCTCAACCTCTACGACCCTCTACGTCTCAAGTAGCACTGCTGCACC
CAGTACTTCCACCGCAACCACCGTGCCAGCCCGTTTGAAAGTCCGGGACA
TATTGATCAACGGCGACGACAGTTTGATCGGGCAACGCGTCACGGTCAAG
GGATGGACCCGCACAATTCGCTCGCAAAAAACCTTCAGTTTCATCGAAAT
AAATGAcggctcctccttggggGGGTTGCAAGTGGTGGCGGACGCGGAGA
AGGTCTGCGACTACGAGGCCGTCCTCTCCAAGATACACACAGGGGCTGCC
CTGGGTGTCGTGGGCGTGATCAAGGCGAGCCCAGGAAAGGGCCAAAAGTA
TGAAGTCGCAGCGgagagcgtggaggtggTCGGGGGCTGCGATCCGGAGG
CCTACCCTCTCCAGAAGAAGCGCCACACGCTCGAGTTCCTCAGGGGGATC
GCCCACCTGCGACCACGCACCAACACCctggccgccgtggcccgcGTCCG
GTCCGCCCTGGCTTTTGCCACGCACAATTTTTTCCAGGAGCAGGGATTCT
ACTACCTGCAGAGCCCTATCATCACGGCCTCTGACTGCGAGGGCGCCGGC
GAGATGTTCCGAGTCACCACCTTGCCGGACAAGGTTTCGGAGTTGCcgcg
ggtggaaggggaggaggatcgcATCGACTACTCCCACGATTTCTTTGGTG
CCCCCGCCTACCTGACCGTGTCGGGGCAGCTCTCGGGGGAGGCCTACGCG
TGCGCCATGGGGGATGTGTACACGTTCGGACCCACCTTCCGGGCCGAGAA
CAGCCAGACCACGCGGCACTTGGCCGAGTTCAACATGATCGAGCCCGAGA
TGGCGTTCGCAGACTTGCAAGACAACATGCGCAACGCCGAAGCCTATGTG
AAGGCCATCGTCAGGCATGTGCTCAAGGAATGCGAGGAGGATCTCGCCTT
CTTCGAGAAATTTTACGACAAGACCCTCATGGCGCGGCTGAACACGctcg
tCTCCGAGTCCTTCGCGCGCGTCGAATACACGGAAGCCGTACGTCTCCTC
CAGGAAGAGATCGCGAAGGACAGAGGCGCTTGGCAGTTCCCAGACGTCGA
CTTCGGGACGGACCTGCAGACGGAGCACGAGCGTTGGCTGTGTGAGAAAA
AATTCCAACGAGCCACCTTTGTGTATAACTACCCGCGCGAGATAAAGGCT
TTCTACATGCGCGAcaacgaggacgggaaaacggtggcggcgatggatCT
GCTCGTCCCTGGCGTCGGAGAGTTGATCGGAGGTtcgcagagggaggaga
ggctggGGAGGCTGGAGGCGAAGCTAGAAGAGTTTGGACTAGACAAGGAG
GACTACTGGTGGTATTTAGATCTCAGGCGCTTCGGGAGTGTGCCACACTC
CGGCTACGGACTGGGCTTCGAGAGGCTCGTGTGCTACGTCACGGGGGTGG
AAAACATTCGGGAAGCGATCGCCTTCCCTCGGACGCCGGGAAGCGCAACG
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