Naga_100026g49, gene256 (gene) Nannochloropsis gaditana

Overview
NameNaga_100026g49
Unique Namegene256
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:683737..686106 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100026g49
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:683737..686106 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02540NO02G02540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna267rna267-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna267rna267Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna267

>rna267-protein ID=rna267-protein|Name=rna267|organism=Nannochloropsis gaditana|type=polypeptide|length=583bp
MVLGTRKGTSSCFCLSLTNLITVTMFSCAAIANSRHQAQTAAFGSLLAKV
PTKSSRTSPRRLLAPCAFTQAPSCRPPRLLVSPVSTSTTLYVSSSTAAPS
TSTATTVPARLKVRDILINGDDSLIGQRVTVKGWTRTIRSQKTFSFIEIN
DGSSLGGLQVVADAEKVCDYEAVLSKIHTGAALGVVGVIKASPGKGQKYE
VAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRS
ALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRV
EGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENS
QTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFF
EKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDF
GTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMDLL
VPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSG
YGLGFERLVCYVTGVENIREAIAFPRTPGSATF
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Synonyms
Publications