EWM30392.1, cds267 (CDS) Nannochloropsis gaditana

Overview
NameEWM30392.1
Unique Namecds267
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:683929..684039 +
Alignment locationCM002455.1:684215..685345 +
Alignment locationCM002455.1:685523..686032 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30392.1
Productasparaginyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100026g49.10646.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:683929..684039 +
CM002455.1supercontigCM002455.1:684215..685345 +
CM002455.1supercontigCM002455.1:685523..686032 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006421asparaginyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004816asparagine-tRNA ligase activity
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II
IPR018150aa-tRNA-synt_II-like
IPR004522Asn-tRNA-ligase
IPR004364aa-tRNA-synt_II
IPR004365NA-bd_OB_tRNA
IPR012340NA-bd_OB-fold
IPR002312Asp/Asn-tRNA-synth_IIb
Homology
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|585113052|gb|EWM30392.1| (asparaginyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1209.51 bits (3128), Expect = 0.000e+0
Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0
Query:    1 MVLGTRKGTSSCFCLSLTNLITVTMFSCAAIANSRHQAQTAAFGSLLAKVPTKSSRTSPRRLLAPCAFTQAPSCRPPRLLVSPVSTSTTLYVSSSTAAPSTSTATTVPARLKVRDILINGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCDYEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            MVLGTRKGTSSCFCLSLTNLITVTMFSCAAIANSRHQAQTAAFGSLLAKVPTKSSRTSPRRLLAPCAFTQAPSCRPPRLLVSPVSTSTTLYVSSSTAAPSTSTATTVPARLKVRDILINGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCDYEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF
Sbjct:    1 MVLGTRKGTSSCFCLSLTNLITVTMFSCAAIANSRHQAQTAAFGSLLAKVPTKSSRTSPRRLLAPCAFTQAPSCRPPRLLVSPVSTSTTLYVSSSTAAPSTSTATTVPARLKVRDILINGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCDYEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|219126452|ref|XP_002183471.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405227|gb|EEC45171.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0
Identity = 316/463 (68.25%), Postives = 365/463 (78.83%), Query Frame = 0
Query:  129 VTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCD-YEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLP-DKVSELPRVEGE----EDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNED--GKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            V++KGW RT+R QKT +F+E+NDGS+L G+Q V   +KV +  +A L K+ TG A+ + G + AS G  Q  E+AA  + VVG C  E YPL KKRHTLE+LR IAHLRPRTNT+AAVARVRS LA A H FFQ QGF Y+Q+P++TASDCEGAGE+FRVTTL  D VS LP+ + E    +DR+DYS DFFG PAYLTVSGQL GE +ACA+GD+YTFGPTFRAENSQT+RHLAEF+M+EPEMAFADL   M NAE  +K +V+HVL  C EDL FF+KFYDK LM RL  LV + F RV Y EA+  LQEEI KD   WQFPDV FGTDL TEHERWL E KF+ A FVYNYP+ IKAFYMRDNE+  G+TV AMDLLVPGVGELIGGSQREERL  LE K+ + GLDKEDYWWYLDLRRFGSVPH+GYGLGFERLV YV G+ENIREAIAFPR PG+A F
Sbjct:    5 VSIKGWVRTVRKQKTLAFVEVNDGSNLSGIQCVIVFDKVDEATKAELDKVTTGCAVELTGPLVASQGGKQAVELAATVLRVVGACPAETYPLAKKRHTLEYLRSIAHLRPRTNTIAAVARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTLNLDSVSTLPKAKNENGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACALGDIYTFGPTFRAENSQTSRHLAEFHMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGEDLEFFQKFYDKALMTRLEKLVQKPFVRVSYREAIEFLQEEINKDPSKWQFPDVSFGTDLATEHERWLAETKFESAVFVYNYPKAIKAFYMRDNEEDGGETVNAMDLLVPGVGELIGGSQREERLDVLEQKIADVGLDKEDYWWYLDLRRFGSVPHAGYGLGFERLVTYVCGIENIREAIAFPRYPGNAEF 467          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|1210513629|dbj|GAX27501.1| (asparaginyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 314/503 (62.43%), Postives = 380/503 (75.55%), Query Frame = 0
Query:   84 VSTSTTLYVSSSTAAPSTSTATTVPARLKVRDILINGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCD-YEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMR--DNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            V+T++T  + S+T  P TST  +   R+K  D     D       +T+KGW RTIR QKT +F ++NDGS+LGG+Q V + +++ +  +A + ++ TG A+ + G +  S G  Q  EVAA+++ VVG C  + YPL KKRH+LE+LR IAHLRPRTNT+AAVARVRS LA A H+FFQ Q F Y+Q+P+ITASDCEGAGE+FRVTTL D   ELPR+   +  +DYS DFFG PA+LTVSGQL GE +ACA+GD+YTFGPTFRAENSQTTRHLAEF+M+EPEMAFADLQ  M NAE  +K  V HVLK C+EDL FF  FYDK L+ RL  LV + FARV Y EA+  LQEEIAKD   WQ+P V+FGTDL TEHERWL E KF+   FVYNYP  IKAFYMR  D ++G+TV AMDLLVPGVGEL+GGSQREERL  LE KL +  L+ +DYWWYLDLRR+GSVPH+GYGLGFERLV YVTG+ENIREAIAFPR PG+A F
Sbjct:   42 VTTTSTTRLFSTT--PGTSTLASFAPRIKTVDAKEPTDSD-----ITIKGWVRTIRKQKTLAFAQVNDGSNLGGIQCVLNFDQLDEASQAAIDQVTTGCAVQITGPLVPSQGGQQAVEVAAKTLRVVGLCPADTYPLAKKRHSLEYLRSIAHLRPRTNTIAAVARVRSQLAAAIHSFFQSQNFVYVQTPLITASDCEGAGELFRVTTL-DLEQELPRLNNTDRTVDYSQDFFGKPAFLTVSGQLGGETHACALGDIYTFGPTFRAENSQTTRHLAEFHMVEPEMAFADLQTAMENAEQLLKYTVSHVLKNCQEDLTFFSSFYDKELLDRLQKLVDQPFARVSYREAIAYLQEEIAKDPSKWQYPHVEFGTDLATEHERWLAETKFESCVFVYNYPAAIKAFYMRANDEDNGETVNAMDLLVPGVGELVGGSQREERLDVLEQKLRDNNLNLDDYWWYLDLRRYGSVPHAGYGLGFERLVQYVTGIENIREAIAFPRYPGNAEF 536          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|1210514549|dbj|GAX26506.1| (asparaginyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 301/458 (65.72%), Postives = 360/458 (78.60%), Query Frame = 0
Query:  129 VTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCD-YEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMR--DNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            +T+KGW RTIR QKT +F ++NDGS+LGG+Q V + +++ +  +A + ++ TG A+ + G +  S G  Q  EVAA+++ VVG C  + YPL KKRH+LE+LR IAHLRPRTNT+AAVARVRS LA A H+FFQ Q F Y+Q+P+ITASDCEGAGE+FRVTTL D   ELPR+   +  +DYS DFFG PA+LTVSGQL GE +ACA+GD+YTFGPTFRAENSQTTRHLAEF+M+EPEMAFADLQ  M NAE  +K  V HVLK C+EDL FF  FYDK L+ RL  LV + FARV Y EA+  LQEEIAKD   WQ+P V+FGTDL TEHERWL E KF+   FVYNYP  IKAFYMR  D ++G+TV AMDLLVPGVGEL+GGSQREERL  LE KL +  L+ +DYWWYLDLRR+GSVPH+GYGLGFERLV YVTG+ENIREAIAFPR PG+A F
Sbjct:   56 ITIKGWVRTIRKQKTLAFAQVNDGSNLGGIQCVLNFDQLDEASQAAIDQVTTGCAVQITGPLVPSQGGQQAVEVAAKTLRVVGLCPADTYPLAKKRHSLEYLRSIAHLRPRTNTIAAVARVRSQLAAAIHSFFQSQNFVYVQTPLITASDCEGAGELFRVTTL-DLEQELPRLNNTDRTVDYSQDFFGKPAFLTVSGQLGGETHACALGDIYTFGPTFRAENSQTTRHLAEFHMVEPEMAFADLQTAMENAEQLLKYTVSHVLKNCQEDLTFFSSFYDKELLDRLQKLVDQPFARVSYREAIAYLQEEIAKDPSKWQYPHVEFGTDLATEHERWLAETKFESCVFVYNYPAAIKAFYMRANDEDNGETVNAMDLLVPGVGELVGGSQREERLDVLEQKLRDNNLNLDDYWWYLDLRRYGSVPHAGYGLGFERLVQYVTGIENIREAIAFPRYPGNAEF 512          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|397564061|gb|EJK44046.1| (hypothetical protein THAOC_37448 [Thalassiosira oceanica])

HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0
Identity = 309/504 (61.31%), Postives = 379/504 (75.20%), Query Frame = 0
Query:   90 LYVSSSTAAPSTSTATTVPARLKVRDILINGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCDYEAVLSKIH---TGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLP-DKVSELPRVEGEEDR----IDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNED--GKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            + +SS+ AA +T   T  P+  +V+ +    D  +    V++KGW RT+R QKT +F+E+NDGSS+ G+Q V   + +   EA L +I    TG ++  +G I  S G  Q  E++A S+ +VG C  E +PL KKRH+LE+LR IAHLRPRTNT+AAVARVRS LA + H FFQ++GF Y+Q+P+ITASDCEGAGEMFRVTTL  D V  LPR + ++      +DY  DFFG  A+LTVSGQL GE +ACA+GDVYTFGPTFRAENSQTTRHLAEF M+EPEMAFADL   M NAEA +K++V   L +C+EDL FF KF+DK L  RL  LVS+ F R+ Y +A++ LQEEIAKD   WQFPDV+FGTDL TEHERWL EKKF+ A FVYNYP++IKAFYMRDN++  G+TV AMDLLVPGVGEL+GGSQREER+  L  K+ E  LD++DYWWYLDLRRFGSVPHSGYGLGFERLV YV G+ENIR+AIAFPR PGSA F
Sbjct:   82 IRMSSTEAAEATEVETNTPSPRRVKTV----DAEVSEDPVSIKGWVRTVRKQKTLAFVEVNDGSSMSGIQCVLPFDAI--DEATLGEIENLTTGCSVHAIGNIVKSQGGKQSVELSATSLRIVGSCPGETFPLAKKRHSLEYLRTIAHLRPRTNTIAAVARVRSTLAGSIHAFFQDEGFNYVQTPLITASDCEGAGEMFRVTTLDTDNVESLPRAKDDDGNELPGVDYGEDFFGKAAFLTVSGQLGGETHACALGDVYTFGPTFRAENSQTTRHLAEFWMVEPEMAFADLTSAMDNAEAMLKSVVGVALDKCDEDLTFFAKFFDKGLKDRLQKLVSKPFVRLPYRDAIKYLQEEIAKDPSKWQFPDVEFGTDLATEHERWLAEKKFESAVFVYNYPKKIKAFYMRDNDEDGGETVNAMDLLVPGVGELVGGSQREERMDVLVDKMRELDLDEDDYWWYLDLRRFGSVPHSGYGLGFERLVTYVCGIENIRDAIAFPRYPGSAEF 579          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|1072232442|gb|OEU17173.1| (asparaginyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0
Identity = 305/475 (64.21%), Postives = 365/475 (76.84%), Query Frame = 0
Query:  118 INGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCD-YEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLP-DKVSELPRVEGEE-----DRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNED--GKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            ++  +S  G  V +KGW RTIR QKT +F+E+NDGS++ G+Q V   + + +  +  L+++ TG ++ V G +  S G  Q  EVAA  + VVG C  +AYPL KKRH+LE+LR +AHLRPRTNT+AAVARVRS LA + H FFQ+ GF Y+Q+P+ITASDCEGAGE+FRVTTL  D  S LP V+ E+     D +D S DFFG PAYLTVSGQL GE YA AMGD+YTFGPTFRAENSQTTRHLAEF+M+EPEMAFADL   M NAE  +K +V+HVL  C+EDL FF KFYDK L+ARL  LV++ F R+ Y +A++ LQEEIAKD   WQFP+V+FGTDL TEHERWL E KF  A FVYNYP+ IKAFYMRDN++  G+TV AMDLLVPGVGEL+GGSQREERL  L  K++E  LD +DYWWYLDLRRFGSVPHSGYGLGFERLV YV G+ENIREAIAFPR PG A F
Sbjct:   22 VDAKESTDGNPVLIKGWVRTIRKQKTLAFVEVNDGSNMNGIQCVLSFDDIDEETKKELARVTTGCSVVVEGPLVKSQGGKQTVEVAATKLRVVGECPGDAYPLAKKRHSLEYLRTLAHLRPRTNTIAAVARVRSQLAGSIHAFFQKTGFVYVQTPLITASDCEGAGELFRVTTLDIDNASSLPLVKTEDGKDTTDIVDSSQDFFGKPAYLTVSGQLGGETYASAMGDIYTFGPTFRAENSQTTRHLAEFHMVEPEMAFADLDSAMENAEQMLKFVVKHVLDNCQEDLTFFGKFYDKGLIARLEKLVAQPFVRISYRDAIKYLQEEIAKDPSKWQFPEVEFGTDLSTEHERWLAETKFDSAVFVYNYPKSIKAFYMRDNDEDGGETVNAMDLLVPGVGELVGGSQREERLDTLLDKMKEQDLDPDDYWWYLDLRRFGSVPHSGYGLGFERLVTYVCGMENIREAIAFPRYPGHAEF 496          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|224000023|ref|XP_002289684.1| (asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335] >gi|220974892|gb|EED93221.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0
Identity = 304/492 (61.79%), Postives = 375/492 (76.22%), Query Frame = 0
Query:  100 STSTATTVPARLKVRDILINGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVC-DYEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTL-PDKVSELPRVEGEEDR----IDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNED--GKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            + S AT  P R+K  +  ++ D       V+VKGW +T+R QKT +F+E+NDGS++GG+Q V   + V  D  A +  + TG ++   G+I  S G  Q  E++A S+ VVG C  E +PL KKRH+LE+LR IAHLRPRTNT+AAVARVRS LA + H+FFQ +GF Y+Q+P+ITASDCEGAGEMFRVTTL  D VS LPR + E+ +    +DY+ DFFG  A+LTVSGQL GE YACA+GDVYTFGPTFRAENSQT RHLAEF M+EPEMAFADL   M NAE+ +K++V  VL++C+EDL FF  F+DK L  RL  +V + F RV Y +A+  LQEEIAKD   WQFP+V+FGTDL TEHERWL E KF+ A FVYNYP++IKAFYMRDN++  G+TV AMDLLVPGVGEL+GGSQREERL  L  K++E GL++EDYWWYLDLRRFGSVPH+GYGLGFERLV YV G+ENIR+AIA+PR PG+A F
Sbjct:    2 TNSDATVSPPRVKTAEAQVSEDP------VSVKGWVKTVRKQKTLAFVEVNDGSNMGGIQCVVPFDGVDEDTLAAIDNLTTGCSVHATGLIVNSQGGKQSVELSASSLRVVGTCPGETFPLAKKRHSLEYLRTIAHLRPRTNTIAAVARVRSTLAGSIHSFFQGEGFQYVQTPLITASDCEGAGEMFRVTTLNTDDVSSLPRAKDEDGKELPGVDYTEDFFGKAAFLTVSGQLGGETYACALGDVYTFGPTFRAENSQTARHLAEFWMVEPEMAFADLTSAMDNAESMLKSVVGEVLEKCDEDLTFFANFFDKGLKNRLKKVVEKPFVRVAYRDAIGYLQEEIAKDPSKWQFPEVEFGTDLATEHERWLAETKFESAVFVYNYPKKIKAFYMRDNDEDGGETVNAMDLLVPGVGELVGGSQREERLDVLIEKMKELGLNEEDYWWYLDLRRFGSVPHAGYGLGFERLVTYVCGIENIRDAIAYPRYPGNAEF 487          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|1113245562|gb|OJV11428.1| (asparagine--tRNA ligase [Chlamydiales bacterium 38-26])

HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0
Identity = 283/477 (59.33%), Postives = 373/477 (78.20%), Query Frame = 0
Query:  110 RLKVRDIL--INGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCDYEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTL-PDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            R+K++ +   + G  S++GQ VTVKGW RT+R+QKTFSFIEINDGS+L   QV+A+ + + +YE +++ + TG ++ + G I  SPGK Q++E+ A++++++G CDPEAYPLQKKRH+ EFLR IAHLRPRTNTL AV RVR+ALAFATH F+Q+QGF Y+ +PIIT SDCEGAG+MFRVTTL P+    LP       ++D+S DFFG PAYLTVSGQL+GE YA A+ D+YTFGPTFRAENS T+RHLAEF MIEPEMAFAD+ DNM NAEA++K ++++VL+ C ED+ FF+K     L+ RL  +++  F R  YT AVR+L E+  KD   +++P V +G+DLQ+EHER+L E+ F +   + +YP+ IKAFYMR N+D KTVAAMD+LVP +GE+IGGSQREERL  LE K++E GL KEDYWWYL+LR++GSVPH+GYG+GFERL+ + TG++NIR+ IAFPR PG A F
Sbjct:    2 RMKIKQLKYPVPGRPSILGQEVTVKGWVRTVRNQKTFSFIEINDGSTLSNFQVIANPD-IPNYEKLMNSLSTGVSVSIQGTIVESPGKNQQFELQAKNIQIIGTCDPEAYPLQKKRHSFEFLRTIAHLRPRTNTLGAVTRVRNALAFATHLFYQQQGFLYIHTPIITGSDCEGAGKMFRVTTLDPNAPPRLPN-----GQVDFSQDFFGKPAYLTVSGQLNGEIYASALSDIYTFGPTFRAENSNTSRHLAEFWMIEPEMAFADINDNMDNAEAFLKFVLKYVLEHCPEDMQFFDKHVSNGLIERLQHVINTPFERASYTYAVRIL-EKSGKD---FEYP-VKWGSDLQSEHERYLAEEFFAKPVIITDYPKHIKAFYMRSNDDNKTVAAMDVLVPKIGEIIGGSQREERLEVLEHKIQEVGLSKEDYWWYLELRKYGSVPHAGYGVGFERLIQFATGMDNIRDVIAFPRYPGKADF 467          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|676385023|ref|XP_009035790.1| (hypothetical protein AURANDRAFT_71352 [Aureococcus anophagefferens] >gi|323453878|gb|EGB09749.1| hypothetical protein AURANDRAFT_71352 [Aureococcus anophagefferens])

HSP 1 Score: 602.823 bits (1553), Expect = 0.000e+0
Identity = 297/490 (60.61%), Postives = 363/490 (74.08%), Query Frame = 0
Query:   98 APSTSTATTVPARLKVRDIL-INGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCDYEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFY-DKTLMARLNTLVSES-FARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQ-RATFVYNYPREIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            A +       P RLK++ I+     +SL+G R  +KGW RT+R+QK   F+E+NDGSS GGLQ V + E        L  + TG A+ V G I  S GK Q  E+ AE++EVVGGC+ E YPLQKKRH+LEFLR IAHLRPRTNTLAA AR+RS LA ATH FF+++GF Y+ SPIITASDCEGAGEMFRVT+L      L +   +E+   +  DFF   A+LTVSGQLS E YACAMGDVYTFGPTFRAENSQT+RHLAEF MIEPEMAFA + + M NAEA +K+ +   L +C  DL F ++FY DK L+ RL ++ + + F R++Y +AV +L+ EIAKD   WQFPDV+FGTDL TEHERWL E        FVY+YPR IK+FYMRDN+DG+TVAA DLL PGVGEL+GGSQREER  +LEAK+ EFGLD EDYWWYLDLR++GSVPH+GYGLGF+RLVCYV+ +ENIR++I +PR PGSAT 
Sbjct:   27 AATMDVGVEAPPRLKIKSIVEAEAPESLVGTRTVIKGWARTVRAQKALGFLEVNDGSSFGGLQCVFEGEAALKE---LKAVSTGCAVAVEGEIVTSGGK-QAIELKAETLEVVGGCE-EGYPLQKKRHSLEFLRSIAHLRPRTNTLAAAARLRSCLAQATHRFFEQEGFAYVHSPIITASDCEGAGEMFRVTSLSGDA--LAKAATKEN--GFEDDFFARSAFLTVSGQLSAETYACAMGDVYTFGPTFRAENSQTSRHLAEFWMIEPEMAFATITEAMDNAEALLKSTIAAALDKCGADLKFCDQFYGDKELLDRLTSIATGAPFVRLKYADAVDVLRAEIAKDPSKWQFPDVEFGTDLATEHERWLAETHCGGNCVFVYDYPRTIKSFYMRDNDDGETVAAFDLLAPGVGELVGGSQREERTDKLEAKMVEFGLDPEDYWWYLDLRKYGSVPHAGYGLGFDRLVCYVSAIENIRDSIPYPRYPGSATI 507          
BLAST of EWM30392.1 vs. NCBI_GenBank
Match: gi|1166732743|ref|WP_079978132.1| (asparagine--tRNA ligase [Parachlamydiaceae bacterium HS-T3])

HSP 1 Score: 598.971 bits (1543), Expect = 0.000e+0
Identity = 279/476 (58.61%), Postives = 359/476 (75.42%), Query Frame = 0
Query:  110 RLKVRDILI--NGDDSLIGQRVTVKGWTRTIRSQKTFSFIEINDGSSLGGLQVVADAEKVCDYEAVLSKIHTGAALGVVGVIKASPGKGQKYEVAAESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRFGSVPHSGYGLGFERLVCYVTGVENIREAIAFPRTPGSATF 583
            RLKV+ +     G  SLIG   TVKGW RT+R+QKTFSFIE+NDGS+L   QVVADA K+ +YE ++ K+ TG ++ + G +  SPGK Q+ E+ A+ +E++G CDP  YPLQKKRH+ EFLR IAHLRPRTNT+ AV R+R+ALAFATH FFQE+GF Y+ +PIIT SDCEGAG+MF VTT    ++ +P+    E  +D++ DFFG P YLTVSGQL+GE YAC+M D+YTFGPTFRAENS T+RHLAEF MIEPEMAFAD+ DNM NAE+Y+K +  HVLK C ED+ FF+K     L+ RL  +V   F R  Y+ AVR+L+    K    ++FP V +G DLQ+EHER+L E+ F +   + +YP++IK+FYMR N+D KTVAAMD+LVP +GE+IGGSQREERL  LE+++ E  L KE+YWWYL+LR++GSVPH+GYG+GFERL+ + TG+ENIR+ I FPR PG A F
Sbjct:    2 RLKVKQLKYPEAGRPSLIGSEATVKGWVRTVRNQKTFSFIEVNDGSTLSNFQVVADA-KMPNYEKIIEKLSTGVSVAITGKMVESPGKNQELEMQADKIEIIGTCDPTTYPLQKKRHSFEFLRSIAHLRPRTNTIGAVTRIRNALAFATHQFFQERGFLYIHTPIITNSDCEGAGKMFEVTTF--DLNNVPKTP--EKTVDFTQDFFGTPTYLTVSGQLNGEIYACSMSDIYTFGPTFRAENSNTSRHLAEFWMIEPEMAFADINDNMDNAESYLKYVFNHVLKNCPEDMQFFDKHISNGLIERLQKIVDTPFERATYSYAVRILE----KAGKTFEFP-VKWGLDLQSEHERYLAEEFFGKPVIITDYPKDIKSFYMRGNDDNKTVAAMDVLVPKIGEIIGGSQREERLDYLESRMRELNLAKENYWWYLELRKYGSVPHAGYGVGFERLIQFTTGMENIRDVIPFPRYPGKADF 467          
The following BLAST results are available for this feature:
BLAST of EWM30392.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113052|gb|EWM30392.1|0.000e+0100.00asparaginyl-trna synthetase [Nannochloropsis gadit... [more]
gi|219126452|ref|XP_002183471.1|0.000e+068.25predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210513629|dbj|GAX27501.1|0.000e+062.43asparaginyl-tRNA synthetase [Fistulifera solaris][more]
gi|1210514549|dbj|GAX26506.1|0.000e+065.72asparaginyl-tRNA synthetase [Fistulifera solaris][more]
gi|397564061|gb|EJK44046.1|0.000e+061.31hypothetical protein THAOC_37448 [Thalassiosira oc... [more]
gi|1072232442|gb|OEU17173.1|0.000e+064.21asparaginyl-tRNA synthetase [Fragilariopsis cylind... [more]
gi|224000023|ref|XP_002289684.1|0.000e+061.79asparaginyl-trna synthetase [Thalassiosira pseudon... [more]
gi|1113245562|gb|OJV11428.1|0.000e+059.33asparagine--tRNA ligase [Chlamydiales bacterium 38... [more]
gi|676385023|ref|XP_009035790.1|0.000e+060.61hypothetical protein AURANDRAFT_71352 [Aureococcus... [more]
gi|1166732743|ref|WP_079978132.1|0.000e+058.61asparagine--tRNA ligase [Parachlamydiaceae bacteri... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna267rna267Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications