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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100287g4.6251.mrna |
| Orig protein id | gnl|cribi|Naga_100287g4.6251 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1407136..1409746 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1179 ID=rna1179|Name=rna1179|organism=Nannochloropsis gaditana|type=mRNA|length=279bp
ATGCCTGGATTTTTCCATCGACGACATGCTGACCTGAACTCAAGTCAAAG
GAAACCGATCCGTTGCTTTCCAGATGATCTCAACTGTAAATTTCTTTTTC
TACCCGTCCCACCACCATCACGCATTGCGTTGCACAGTTGTAAAGGCACG
GTTTGGACCATGCAGTCGGACAGCCGCCAAGTTGTGCAGGTGCGTGGAAT
ACATGGAGGACGACGTGTGGGAGTCGCGAAGTTGACTGTAGATGCACTTT
TCCGCCAAGTTTCCTTGTTCGGAATCTGA back to topprotein sequence of rna1179 >rna1179-protein ID=rna1179-protein|Name=rna1179|organism=Nannochloropsis gaditana|type=polypeptide|length=248bp
MHFAAERAHGLAMPASNSGTFRMSMASPPGANAAGAHTGPLANTSGYTHT
NWQPSPGLGMPGAGPGDSWAPLHPACNDIRFPQMGTNGAGAMWQVPYPNY
PPAQYFQAAPPQDEMPVPREVRMQSMPPGPDRLGALAAVSAEMGGNGQAK
GPVGGQSTDAGDVDRGAKGEEGDRVKEGQGAGENGSRRVSIEGNLASSRK
RPLHEEGEDIDEGGRHRESTQLCDDGSKGVGKMGRRDEASRKGHEKGE back to topmRNA from alignment at CM002456.1:1407136..1409746+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1179 ID=rna1179|Name=rna1179|organism=Nannochloropsis gaditana|type=mRNA|length=2611bp|location=Sequence derived from alignment at CM002456.1:1407136..1409746+ (Nannochloropsis gaditana)
GCGGACAAAACCGTCTTTCCATCGACGGGGTGTTCATTTCGGTCTCTTGG
GCTTTTGTTGAAAGCACGCTTGTTAAAAATCCCCTAACTTTCTGTTTCGT
TTCGGGATTTCGGAAGAGAGTCGCACAGGGTATGAAAGTCGCGGTCCATG
CTAGGTGTGCAACATAGCCTTCATATAACAAGTACCTGCTCACAATGTCG
ACGGAGTACAAAGAGATGGTGTGGCATCTCCTTTATCGCTCGACGCGTGC
AGACGAGAAGCAACAAGAAGGTGGCTCCCCTCGGAAGGATGTGTCTGCAG
GGGATGACGACAAATTGGACGGAAATCAGATGAAGACCGAGTTCGAGGAG
CAAGAGAACAGCAAGCAAGATCAAAATGTCGGTGATGCGAAACAGGAATC
GACGTGTGAGGTTCGGGCAGTGGTACGCGGCCCCATGGCCAGTGGATTAA
CGGATGAGACATTGGTGTCGATAGTGATCAACGCGGTCAAGAGCGGCCGC
ACCACGCAAGTCATCAACCTAGACGATTTCCCCGGAGACACAACGACCCT
GAAAGCGGACGAAGACAAGAACAATGCAGGGCCTGAGCCTGTCAAAAGCA
CGAGCACGAAAGGAGTGCCAAAGAAGATGGCGGCGCCTCACTCGACTTAT
ACAAATGCGAACCCTGGCAAGCACCATCGGCCCAGCTCTGCACGAAGAGC
GTGTTGCTTTTGCACCGCGAAGAAGCTAGCTTGTAGCGGAGGTCTCCCCT
GGTAAGTGATGTTTTTGGGCTCTCGGACCGAGACACGTGCGGTGCTgtgt
ctcctccctctggtGATTCTGTCGGTTGCAGGCttgatcctccctcttct
ttttctggTTTTCTCACAGTCACCTGTGCGCCACTCGTGGTATCACCTGC
GAGTACGTGGAACGGAAGCGCCGACAACAGCCTCACGTGCCCAAAGTCAT
CAAACGGGCCAcaccgggggaggagcccgTAACCGCCGCTGTTTTTCGGT
CTAGGCCCTCcgacccctcctctctgtccccGTCAGACTCGTCGGCCATC
CCTGCACCCAGGCaatctcccccaccctcttcccaaTCCGGTGGGCCCCG
GCGTGGCGCCAAGAGCACACCGGCACCCGCGACGGCGgctccgcttccct
ccccttggcCACCCGCGCCGGCCCCCCGAGGTCCCTCGCAACCTATGCTA
CCATCTGCTCCCATGGCGGAAACAGAACGCGCGTACTGGCATGCCATGAA
CCCGTCCATGTTTCCCCCCTTTGGgatgggcgggggagggggggggagtc
cccccccaccctatGCATTTCGCGGCGGAGCGAGCGCACGGACTTGCCAT
GCCGGCGTCCAACTCGGGCACGTTCAGGATGAGCAtggcttccccccctg
gcgCCAACGCCGCCGGTGCCCATACGGGCCCTCTGGCCAATACCAGCGGC
TACACCCATACCAACTGGCAGCCCTCGCCCGGCCTTGGCATGCCTGGGGC
CGGCCCTGGAGATTCCTGggcccctctccaccccgcTTGCAATGACATCC
GCTTCCCACAAATGGGGACCAACGGAGCGGGCGCCATGTGGCAGGTTCCT
TACCCCAACTATCCCCCTGCGCAATATTTCCAGGCTGCGCCGCCCCAGGA
CGAAATGCCGGTCCCTCGGGAGGTCAGGATGCAGTCGATGCCACCAGGTC
CGGACAGATTGGGAGCCCTGGCAGCGGTGTCGGCGGAaatgggggggaat
ggaCAGGCCAAGGGTCCTGTTGGAGGGCAAAGCACCGACGCTGGTGACGT
GGATCGTGGcgcgaaaggagaggaaggggatcgagtgaaggaggggcaag
gggctgGTGAGAATGGATCTCGGCGAGTGAGCATCGAAGGGAACTTGGCC
TCAAGCAGAAAACGACCGCtccacgaggaaggggaggacatagacgaggg
aggaaggcacagGGAAAGTACGCAATTGTGCGATGACGGGTCGAAGGGGG
TTGGGAAGatgggaaggcgggacgAGGCGAGCAGGAAAGGCCATGAAAAG
GGTGAGTAGGGTAGGAAAGCGATACAGACTCGACGGACGCAACATGGCTG
AAGCGGTAATCGAAcaggtgagggggaagaaaccAGCATCGCACCAGCCA
accaggagaagaagggaacaGTGCAGGGATGTACTGCAGCATGAGCAGAG
GCAGCAACCGGTAATCCTCGCGTCCGAGCTATCAGGCTGACATGGTAGGC
TTGTCCAGCGACATTGATAGGTATGCGCGTCCTGGCATCTGTCCTTCATC
ACATCAGATGTATACGAGCTTCGGACACaaataaaaagaaaaacCGACTA
AATTTTCGGTGGGACTACACTTCTTGTGCATTTGCAGGATCACAAAAATG
ACGGGGCGCTGGCTCTTATGCGCTGAACGGCGAACAAAACATCATTTAAA
CACCACGCTTCCTTGCAGAATAAAGTCCTTGTGAGAAAATTATACAAAAA
GTTGCAGTTTCAACACATTGGAATTTCAAAGCGCAACATTCTCGTGCAAC
ATCTTGCAGAAAGTCATAAGTCGAAAGCTGCAGAGAGCAATCATCATTTT
TCATGCTGCCG back to topCoding sequence (CDS) from alignment at CM002456.1:1407136..1409746+ >rna1179 ID=rna1179|Name=rna1179|organism=Nannochloropsis gaditana|type=CDS|length=747bp|location=Sequence derived from alignment at CM002456.1:1407136..1409746+ (Nannochloropsis gaditana)
atGCATTTCGCGGCGGAGCGAGCGCACGGACTTGCCATGCCGGCGTCCAA
CTCGGGCACGTTCAGGATGAGCAtggcttccccccctggcgCCAACGCCG
CCGGTGCCCATACGGGCCCTCTGGCCAATACCAGCGGCTACACCCATACC
AACTGGCAGCCCTCGCCCGGCCTTGGCATGCCTGGGGCCGGCCCTGGAGA
TTCCTGggcccctctccaccccgcTTGCAATGACATCCGCTTCCCACAAA
TGGGGACCAACGGAGCGGGCGCCATGTGGCAGGTTCCTTACCCCAACTAT
CCCCCTGCGCAATATTTCCAGGCTGCGCCGCCCCAGGACGAAATGCCGGT
CCCTCGGGAGGTCAGGATGCAGTCGATGCCACCAGGTCCGGACAGATTGG
GAGCCCTGGCAGCGGTGTCGGCGGAaatgggggggaatggaCAGGCCAAG
GGTCCTGTTGGAGGGCAAAGCACCGACGCTGGTGACGTGGATCGTGGcgc
gaaaggagaggaaggggatcgagtgaaggaggggcaaggggctgGTGAGA
ATGGATCTCGGCGAGTGAGCATCGAAGGGAACTTGGCCTCAAGCAGAAAA
CGACCGCtccacgaggaaggggaggacatagacgagggaggaaggcacag
GGAAAGTACGCAATTGTGCGATGACGGGTCGAAGGGGGTTGGGAAGatgg
gaaggcgggacgAGGCGAGCAGGAAAGGCCATGAAAAGGGTGAGTAG back to top
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