Naga_100287g4, gene1135 (gene) Nannochloropsis gaditana

Overview
NameNaga_100287g4
Unique Namegene1135
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1407136..1409746 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100287g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1407136..1409746 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL050ngnoL050Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1179rna1179-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1179rna1179Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1179

>rna1179-protein ID=rna1179-protein|Name=rna1179|organism=Nannochloropsis gaditana|type=polypeptide|length=248bp
MHFAAERAHGLAMPASNSGTFRMSMASPPGANAAGAHTGPLANTSGYTHT
NWQPSPGLGMPGAGPGDSWAPLHPACNDIRFPQMGTNGAGAMWQVPYPNY
PPAQYFQAAPPQDEMPVPREVRMQSMPPGPDRLGALAAVSAEMGGNGQAK
GPVGGQSTDAGDVDRGAKGEEGDRVKEGQGAGENGSRRVSIEGNLASSRK
RPLHEEGEDIDEGGRHRESTQLCDDGSKGVGKMGRRDEASRKGHEKGE
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Synonyms
Publications