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Properties
Property Name | Value |
TranscriptId | 598721 |
Track | FilteredModels2 |
ProteinId | 598635 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_19 | supercontig | scaffold_19:431476..433200 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7403 ID=mRNA_7403|Name=jgi.p|Nanoce1779_2|598635|organism=Nannochloropsis oceanica|type=mRNA|length=1317bp ACAGCAAAAGCCCGAGTTTTGGCCACGGCGTACCCCTGTATACACACCGC AAAGGCCACCACCCCTCTCCTCCTTATCTTCCTCTTCTTTATCATGTCCG TTGCCGAGGCCTTCAAAGCAGAGGGCCATAATGCCTTTGTCATCGGATGG ACGGGTGAAGTTGGGAAGGAAGTCGTCAAGTCTTTGGCGGCGATGGACTT ATACAATAAAGTGTATTTGATTGGAAGACGAAATGCGGAGCTGCCCACGG GGCCGGGCTTCGAGAAGATGGAGCAACGCATCCTGGACTTCGATCTCCTC CTTTCCGATCCTCCTTCTCCTACTGCCGTTGCTGCATTTGCCGGGGCGGA TGTAGGCTTTTGCTGCTTGGGGACGACGAGGGGAAAGAGCGGAGTGGAGG GTTTCGTCAAGGTCGATCACGACTACGTTGTCGGCGCCGCCCGGGCAGCC AAAGCCAATCTGAATGCCTTTCACGTCGTAACGTCCGTAGGGAGCAACGC CAAGTCCCCCCTCCTATATCCCAAGACCAAGGGACGGACGGAAGAAGACT TGAAAGCGTTGGACCTCCCCCGTTTGTGTATTTACCGCCCTGGCGTATTG ATGTGCGATCGAGGAGAGAAGCGGGTGATGGAGCGGATGTCACGCTTTTT CTTGACGCCGCTGGCCGTGCTGGCGCCGACTGTTATGACCATCCCCACCT CTACCCTGGGGAAGGCGATGGTGATCAAGTCTGCCATGGAGGGCGACAAA GTGGAAACACTAGAGAATGGTCCGATTCATGCCGTGGCGAAATCGGGATT GTAAGGGGGGGAAAGTTGCAGAGAGGCTCGTTCTGCTGCCGTGAACGACT TTTTCCCCTACAAATGAAATGGTAAGGGGCCAGATTGTGGAAGTAGTGGC AATATTAAGGTTCTGATGCACACTATGGTAAAGAAATAATCGTGAGGACG AAAGAAAGGAGGTGGGATGAAGAAGAGGCAGAGGGAAGATTTGCAAGTAT GAGAATGTGTGAGTGACGGAAAGGAGTGGGGAGAGGGAGAGGACGAGACA CAAGGAGAGAGGAGTAAAAGAAAAGGAAGGGGAAAGAAACACGAAGGTAA CCACCTCTTGTGCATCATGTATGGCGATGGGGGAGAAGATCAAGAATAAT AACAATCACAAGAGCTGAATAGAAAAAGGGGGGAAAATGCGGGCGGCGGT AGACCCAAACAAAGAGAAAACAAACAATGGAGGCTACTAGGCAATGCTAG ACGAATCAATCGCGAATATCGTCAAAAGGCCGAATTAAAGGAGACCTGAG GAGATTTAAGATATTGA back to topprotein sequence of jgi.p|Nanoce1779_2|598635 >mRNA_7403-protein ID=mRNA_7403-protein|Name=jgi.p|Nanoce1779_2|598635|organism=Nannochloropsis oceanica|type=polypeptide|length=237bp MSVAEAFKAEGHNAFVIGWTGEVGKEVVKSLAAMDLYNKVYLIGRRNAEL PTGPGFEKMEQRILDFDLLLSDPPSPTAVAAFAGADVGFCCLGTTRGKSG VEGFVKVDHDYVVGAARAAKANLNAFHVVTSVGSNAKSPLLYPKTKGRTE EDLKALDLPRLCIYRPGVLMCDRGEKRVMERMSRFFLTPLAVLAPTVMTI PTSTLGKAMVIKSAMEGDKVETLENGPIHAVAKSGL* back to topmRNA from alignment at scaffold_19:431476..433200+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7403 ID=mRNA_7403|Name=jgi.p|Nanoce1779_2|598635|organism=Nannochloropsis oceanica|type=mRNA|length=1725bp|location=Sequence derived from alignment at scaffold_19:431476..433200+ (Nannochloropsis oceanica) ACAGCAAAAGCCCGAGTTTTGGCCACGGCGTACCCCTGTATACACACCGC
AAAGGCCACCACCCCTCTCCTCCTTATCTTCCTCTTCTTTATCATGTCCG
TTGCCGAGGCCTTCAAAGCAGAGGGCCATAATGCCTTTGTCATCGGATGG
ACGGGTGAAGTTGGGAAGGAAGTCGTCAAGGTAAGTCTGCCTCCCCCCAA
TCCTCTGTCCCCTCCAATGTCTCATACTCACACCAACGCCCACGGCTTAT
GTAATATATATAGTCTTTGGCGGCGATGGACTTATACAATAAAGTGTATT
TGATTGGAAGACGAAATGCGGAGCTGCCCACGGGGCCGGGCTTCGAGAAG
ATGGTACGTCACAAACCTGTGAGAGGGTGGGGTGGGGCTGGGGTGTGGTT
TGGTTTGGTGCCTCCATGCCCCTCTTACCCTTCCTCATTCTCGGTCATAT
GTTTCCCTTTCTCCTAAGTAGACATATGTTTCTGCATGGTCTATTTTCCT
TGCTGTCAAACCCACCACTGACTCTCCTCCCTCTGTTCCTGTGTTTCTCT
TTTTCTCTCTCTTTCCCTTCCTCTCTCCCTCCCACAACAGGAGCAACGCA
TCCTGGACTTCGATCTCCTCCTTTCCGATCCTCCTTCTCCTACTGCCGTT
GCTGCATTTGCCGGGGCGGATGTAGGCTTTTGCTGCTTGGGGACGACGAG
GGGAAAGAGCGGAGTGGAGGGTTTCGTCAAGGTAAGGGGAAAAAATGAAC
AATTTAAGTATTGAATGATTGAATGAGTGAATTGTCGATCCAATGATCAA
ACCACTCACTCCTGTCTAGGTCGATCACGACTACGTTGTCGGCGCCGCCC
GGGCAGCCAAAGCCAATCTGAATGCCTTTCACGTCGTAACGTCCGTAGGG
AGCAACGCCAAGTCCCCCCTCCTATATCCCAAGACCAAGGGACGGACGGA
AGAAGACTTGAAAGCGTTGGACCTCCCCCGTTTGTGTATTTACCGCCCTG
GCGTATTGATGTGCGATCGAGGAGAGAAGCGGGTGATGGAGCGGATGTCA
CGCTTTTTCTTGACGCCGCTGGCCGTGCTGGCGCCGACTGTTATGACCAT
CCCCACCTCTACCCTGGGGAAGGCGATGGTGATCAAGTCTGCCATGGAGG
GCGACAAAGTGGAAACACTAGAGAATGGTCCGATTCATGCCGTGGCGAAA
TCGGGATTGTAAGGGGGGGAAAGTTGCAGAGAGGCTCGTTCTGCTGCCGT
GAACGACTTTTTCCCCTACAAATGAAATGGTAAGGGGCCAGATTGTGGAA
GTAGTGGCAATATTAAGGTTCTGATGCACACTATGGTAAAGAAATAATCG
TGAGGACGAAAGAAAGGAGGTGGGATGAAGAAGAGGCAGAGGGAAGATTT
GCAAGTATGAGAATGTGTGAGTGACGGAAAGGAGTGGGGAGAGGGAGAGG
ACGAGACACAAGGAGAGAGGAGTAAAAGAAAAGGAAGGGGAAAGAAACAC
GAAGGTAACCACCTCTTGTGCATCATGTATGGCGATGGGGGAGAAGATCA
AGAATAATAACAATCACAAGAGCTGAATAGAAAAAGGGGGGAAAATGCGG
GCGGCGGTAGACCCAAACAAAGAGAAAACAAACAATGGAGGCTACTAGGC
AATGCTAGACGAATCAATCGCGAATATCGTCAAAAGGCCGAATTAAAGGA
GACCTGAGGAGATTTAAGATATTGA back to topCoding sequence (CDS) from alignment at scaffold_19:431476..433200+ >mRNA_7403 ID=mRNA_7403|Name=jgi.p|Nanoce1779_2|598635|organism=Nannochloropsis oceanica|type=CDS|length=2844bp|location=Sequence derived from alignment at scaffold_19:431476..433200+ (Nannochloropsis oceanica) ATGTCCGTTGCCGAGGCCTTCAAAGCAGAGGGCCATAATGCCTTTGTCAT CGGATGGACGGGTGAAGTTGGGAAGGAAGTCGTCAAGTCTTTGGCGGCGA TGGACTTATACAATAAAGTGTATTTGATTGGAAGACGAAATGCGGAGCTG CCCACGGGGCCGGGCTTCGAGAAGATGGAGCAACGCATCCTGGACTTCGA TCTCCTCCTTTCCGATCCTCCTTCTCCTACTGCCGTTGCTGCATTTGCCG GGGCGGATGTAGGCTTTTGCTGCTTGGGGACGACGAGGGGAAAGAGCGGA GTGGAGGGTTTCGTCAAGGTCGATCACGACTACGTTGTCGGCGCCGCCCG GGCAGCCAAAGCCAATCTGAATGCCTTTCACGTCGTAACGTCCGTAGGGA GCAACGCCAAGTCCCCCCTCCTATATCCCAAGACCAAGGGACGGACGGAA GAAGACTTGAAAGCGTTGGACCTCCCCCGTTTGTGTATTTACCGCCCTGG CGTATTGATGTGCGATCGAGGAGAGAAGCGGGTGATGGAGCGGATGTCAC GCTTTTTCTTGACGCCGCTGGCCGTGCTGGCGCCGACTGTTATGACCATC CCCACCTCTACCCTGGGGAAGGCGATGGTGATCAAGTCTGCCATGGAGGG CGACAAAGTGGAAACACTAGAGAATGGTCCGATTCATGCCGTGGCGAAAT CGGGATTGTAAATGTCCGTTGCCGAGGCCTTCAAAGCAGAGGGCCATAAT GCCTTTGTCATCGGATGGACGGGTGAAGTTGGGAAGGAAGTCGTCAAGTC TTTGGCGGCGATGGACTTATACAATAAAGTGTATTTGATTGGAAGACGAA ATGCGGAGCTGCCCACGGGGCCGGGCTTCGAGAAGATGGAGCAACGCATC CTGGACTTCGATCTCCTCCTTTCCGATCCTCCTTCTCCTACTGCCGTTGC TGCATTTGCCGGGGCGGATGTAGGCTTTTGCTGCTTGGGGACGACGAGGG GAAAGAGCGGAGTGGAGGGTTTCGTCAAGGTCGATCACGACTACGTTGTC GGCGCCGCCCGGGCAGCCAAAGCCAATCTGAATGCCTTTCACGTCGTAAC GTCCGTAGGGAGCAACGCCAAGTCCCCCCTCCTATATCCCAAGACCAAGG GACGGACGGAAGAAGACTTGAAAGCGTTGGACCTCCCCCGTTTGTGTATT TACCGCCCTGGCGTATTGATGTGCGATCGAGGAGAGAAGCGGGTGATGGA GCGGATGTCACGCTTTTTCTTGACGCCGCTGGCCGTGCTGGCGCCGACTG TTATGACCATCCCCACCTCTACCCTGGGGAAGGCGATGGTGATCAAGTCT GCCATGGAGGGCGACAAAGTGGAAACACTAGAGAATGGTCCGATTCATGC CGTGGCGAAATCGGGATTGTAAATGTCCGTTGCCGAGGCCTTCAAAGCAG AGGGCCATAATGCCTTTGTCATCGGATGGACGGGTGAAGTTGGGAAGGAA GTCGTCAAGTCTTTGGCGGCGATGGACTTATACAATAAAGTGTATTTGAT TGGAAGACGAAATGCGGAGCTGCCCACGGGGCCGGGCTTCGAGAAGATGG AGCAACGCATCCTGGACTTCGATCTCCTCCTTTCCGATCCTCCTTCTCCT ACTGCCGTTGCTGCATTTGCCGGGGCGGATGTAGGCTTTTGCTGCTTGGG GACGACGAGGGGAAAGAGCGGAGTGGAGGGTTTCGTCAAGGTCGATCACG ACTACGTTGTCGGCGCCGCCCGGGCAGCCAAAGCCAATCTGAATGCCTTT CACGTCGTAACGTCCGTAGGGAGCAACGCCAAGTCCCCCCTCCTATATCC CAAGACCAAGGGACGGACGGAAGAAGACTTGAAAGCGTTGGACCTCCCCC GTTTGTGTATTTACCGCCCTGGCGTATTGATGTGCGATCGAGGAGAGAAG CGGGTGATGGAGCGGATGTCACGCTTTTTCTTGACGCCGCTGGCCGTGCT GGCGCCGACTGTTATGACCATCCCCACCTCTACCCTGGGGAAGGCGATGG TGATCAAGTCTGCCATGGAGGGCGACAAAGTGGAAACACTAGAGAATGGT CCGATTCATGCCGTGGCGAAATCGGGATTGTAAATGTCCGTTGCCGAGGC CTTCAAAGCAGAGGGCCATAATGCCTTTGTCATCGGATGGACGGGTGAAG TTGGGAAGGAAGTCGTCAAGTCTTTGGCGGCGATGGACTTATACAATAAA GTGTATTTGATTGGAAGACGAAATGCGGAGCTGCCCACGGGGCCGGGCTT CGAGAAGATGGAGCAACGCATCCTGGACTTCGATCTCCTCCTTTCCGATC CTCCTTCTCCTACTGCCGTTGCTGCATTTGCCGGGGCGGATGTAGGCTTT TGCTGCTTGGGGACGACGAGGGGAAAGAGCGGAGTGGAGGGTTTCGTCAA GGTCGATCACGACTACGTTGTCGGCGCCGCCCGGGCAGCCAAAGCCAATC TGAATGCCTTTCACGTCGTAACGTCCGTAGGGAGCAACGCCAAGTCCCCC CTCCTATATCCCAAGACCAAGGGACGGACGGAAGAAGACTTGAAAGCGTT GGACCTCCCCCGTTTGTGTATTTACCGCCCTGGCGTATTGATGTGCGATC GAGGAGAGAAGCGGGTGATGGAGCGGATGTCACGCTTTTTCTTGACGCCG CTGGCCGTGCTGGCGCCGACTGTTATGACCATCCCCACCTCTACCCTGGG GAAGGCGATGGTGATCAAGTCTGCCATGGAGGGCGACAAAGTGGAAACAC TAGAGAATGGTCCGATTCATGCCGTGGCGAAATCGGGATTGTAA back to top
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