|
Properties
Property Name | Value |
TranscriptId | 119643 |
Track | FilteredModels2 |
ProteinId | 119557 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_171 | supercontig | scaffold_171:5190..7140 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11937 ID=mRNA_11937|Name=jgi.p|Nanoce1779_2|119557|organism=Nannochloropsis oceanica|type=mRNA|length=1184bp TATTCTTATTCTTTTTGATATTTGCTTCCCTCCCGCGCCGCAGGTGATGT TGTGCTGCTTGGTGGCCTCCTTCGTCTCCCTTTCCCTCGTGGCCCGCGCC AAGACGCTCCCTCAGGTCGCCTTCGGCCGCGTCATCGGCGGCATGTTCGG TGGCTTCGTTCCCCTAGCCCAGAGCGCCGTCGCGGATTTGGTGCCGGTGG AAGGTCGCGCCAAATTTTTGGGCAGGATCCAGGCGTGTATGGGAGCTGGC TTCGTGGCTGGGCCGGCACTTGGACTGTTGGGCTCGCGGGTCTTTGAATT GGACTCTCGCGGGATCCTGAAAAGGGCGGCCATCCTGCCGGCTGTTTCCT TTTGTTATGCCTTCGTCTTCATAAAGGAAACCAAGGCCTCCGTCCTCCTT GATCGGGCCCGCCGCAGCCAAGGAAACATAGGCAGCAGCACCAGTAGCAC CAGCACCGTGACTACCGCGCGCCCTACCCCCCTCTCTACCCCCATGGATG AAAATGTGGCTTTCCCTATCCTGCCTGTGCGGCTGTTGGTCCTGAACGGC TTCTTGCTTATGTACGCCTTTTCTGTCGAGACGGTTTATGCCATGTTCAT CAAGGACAATTTTGGGTATGGCGAGACGGCCCTCGGCGCCGTCTTTGCCC TCAACGGCATCGCTGTCGGCTTGCTGCAAGTCTTTCTCATCAAGGACCTG TTTGCCCGCCTAGGCAAACACATGATGCTGGCCTTCGGCAACCTCCTCCT GGCCCTGGGCATGGTGGGCCTCTCCCTCCTTCGCTACAAGCTCTGGCACT TCTCCATGTTCTCCCTCCACATCATCGGCTACGCCATTTCCGACACTGCC CTTGCCTCCCTCATTTCCCGCTATTCCGCCCCCGAGCACCAAGGCCGCAA CCTGGGATGGAGCCACGCTGCCCAGTCCTGCGCCCGTATCATAAGTCCGT TGGTGGCGGGCATGCTCTATGAGTGGAGCAAGGAGCCGGGTCATCCTTTG CCGCCCGGGGCCCTGCCCTACATTGCTGGGAGCGCTTTTCCCTTGTTGGG CGTAATGGTGCCCACGATATTGTATTTGAAAAGCATTGAGCGAAAGAGGA TCTTGGCAGCGGAAGGAGGGTAGGATGGGGGAAGGAAAGGTTGGGGAAGG AAAGAATAAAGTAAAAAATGCGATGATAAGCAAA back to topprotein sequence of jgi.p|Nanoce1779_2|119557 >mRNA_11937-protein ID=mRNA_11937-protein|Name=jgi.p|Nanoce1779_2|119557|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp MLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVP VEGRAKFLGRIQACMGAGFVAGPALGLLGSRVFELDSRGILKRAAILPAV SFCYAFVFIKETKASVLLDRARRSQGNIGSSTSSTSTVTTARPTPLSTPM DENVAFPILPVRLLVLNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVF ALNGIAVGLLQVFLIKDLFARLGKHMMLAFGNLLLALGMVGLSLLRYKLW HFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIIS PLVAGMLYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTILYLKSIERK RILAAEGG* back to topmRNA from alignment at scaffold_171:5190..7140+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11937 ID=mRNA_11937|Name=jgi.p|Nanoce1779_2|119557|organism=Nannochloropsis oceanica|type=mRNA|length=1951bp|location=Sequence derived from alignment at scaffold_171:5190..7140+ (Nannochloropsis oceanica) TATTCTTATTCTTTTTGATATTTGCTTCCCTCCCGCGCCGCAGGTGATGT
TGTGCTGCTTGGTGGCCTCCTTCGTCTCCCTTTCCCTCGTGGCCCGCGCC
AAGACGCTCCCTCAGGTCGCCTTCGGCCGCGTCATCGGTATGGAAGGATG
AGAGGGATGGACGCAGGGAGGGAGGAACAGAGAATAAATTCATGGGAAGT
GCCTGGATGATTCGTATTGAGTAAGAGGTCCTCTGGGCCCCCTACACTTG
ATCCATACACCCATTACCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCA
GGCGGCATGTTCGGTGGCTTCGTTCCCCTAGCCCAGAGCGCCGTCGCGGA
TTTGGTGCCGGTGGAAGGTCGCGCCAAATTTTTGGGCAGGATCCAGGTAC
GTAGGATGGAAGGAGGAAAGGAGGGAGGGAAGGAAGGGGCAGAGATAGAG
TGAGGAGTGCTCTCTGTCTCGTACTGTCCCTGCTGCCATGAGGACTTCGG
GTTTTTGTTTGAGTGTTTACCCCCTTCCTCTCTTCCCTCCTTTCTCCCCC
ATTCCCTCCCTGCATAGGCGTGTATGGGAGCTGGCTTCGTGGCTGGGCCG
GCACTTGGACTGTTGGGCTCGCGGGTCTTTGAATTGGACTCTCGCGGGGT
AAGGAGGGGGGGAGGAAGGGTTCAAGAGAGAGCATTAGGGGAAGGGCAGT
GCGAGCGAGTGAAAAAGTTTTGTCTCGTTGTTTTCAACAGCAACGAGTCT
GAATTTGGAAGGAAAGCTGAGACTCTTTTTTATCTTTCCACTTCTCCTGC
ACTCACTCGCTCCCTCCCTCTCTCCATTGTTCATTTCTTTCCTCCCGTCC
AGATCCTGAAAAGGGCGGCCATCCTGCCGGCTGTTTCCTTTTGTTATGCC
TTCGTCTTCATAAAGGAAACCAAGGCCTCCGTCCTCCTTGATCGGGCCCG
CCGCAGCCAAGGAAACATAGGCAGCAGCACCAGTAGCACCAGCACCGTGA
CTACCGCGCGCCCTACCCCCCTCTCTACCCCCATGGATGAAAATGTGGCT
TTCCCTATCCTGCCTGTGCGGCTGTTGGTCCTGAACGGCTTCTTGCTTAT
GTACGCCTTTTCTGTCGAGACGGTTTATGCCATGTTCATCAAGGTCCGCG
AGGAGGGCGTTGGGAAGGGAGAGGGGAGGAGTGAGCAGGACATGTGTTGG
TGGATCAATAGCTCCATTTCTCACGACACATCTTTCTCGCTTTTCTCCTT
CTCTGTCCTCCTCTCGATGTACAGGACAATTTTGGGTATGGCGAGACGGC
CCTCGGCGCCGTCTTTGCCCTCAACGGCATCGCTGTCGGCTTGCTGCAAG
TCTTTCTCATCAAGGACCTGTTTGCCCGCCTAGGTACATGAGAGGGGGAA
AGAAAAATGACATAGACACAAGTGGAAACACAATCTTGTCCTCGCTTTTA
CTAATGTCCTCTCTTCCAACCCTTCACTAGGCAAACACATGATGCTGGCC
TTCGGCAACCTCCTCCTGGCCCTGGGCATGGTGGGCCTCTCCCTCCTTCG
CTACAAGCTCTGGCACTTCTCCATGTTCTCCCTCCACATCATCGGCTACG
CCATTTCCGACACTGCCCTTGCCTCCCTCATTTCCCGCTATTCCGCCCCC
GAGCACCAAGGCCGCAACCTGGGATGGAGCCACGCTGCCCAGTCCTGCGC
CCGTATCATAAGTCCGTTGGTGGCGGGCATGCTCTATGAGTGGAGCAAGG
AGCCGGGTCATCCTTTGCCGCCCGGGGCCCTGCCCTACATTGCTGGGAGC
GCTTTTCCCTTGTTGGGCGTAATGGTGCCCACGATATTGTATTTGAAAAG
CATTGAGCGAAAGAGGATCTTGGCAGCGGAAGGAGGGTAGGATGGGGGAA
GGAAAGGTTGGGGAAGGAAAGAATAAAGTAAAAAATGCGATGATAAGCAA
A back to topCoding sequence (CDS) from alignment at scaffold_171:5190..7140+ >mRNA_11937 ID=mRNA_11937|Name=jgi.p|Nanoce1779_2|119557|organism=Nannochloropsis oceanica|type=CDS|length=6462bp|location=Sequence derived from alignment at scaffold_171:5190..7140+ (Nannochloropsis oceanica) ATGTTGTGCTGCTTGGTGGCCTCCTTCGTCTCCCTTTCCCTCGTGGCCCG CGCCAAGACGCTCCCTCAGGTCGCCTTCGGCCGCGTCATCGGCGGCATGT TCGGTGGCTTCGTTCCCCTAGCCCAGAGCGCCGTCGCGGATTTGGTGCCG GTGGAAGGTCGCGCCAAATTTTTGGGCAGGATCCAGGCGTGTATGGGAGC TGGCTTCGTGGCTGGGCCGGCACTTGGACTGTTGGGCTCGCGGGTCTTTG AATTGGACTCTCGCGGGATCCTGAAAAGGGCGGCCATCCTGCCGGCTGTT TCCTTTTGTTATGCCTTCGTCTTCATAAAGGAAACCAAGGCCTCCGTCCT CCTTGATCGGGCCCGCCGCAGCCAAGGAAACATAGGCAGCAGCACCAGTA GCACCAGCACCGTGACTACCGCGCGCCCTACCCCCCTCTCTACCCCCATG GATGAAAATGTGGCTTTCCCTATCCTGCCTGTGCGGCTGTTGGTCCTGAA CGGCTTCTTGCTTATGTACGCCTTTTCTGTCGAGACGGTTTATGCCATGT TCATCAAGGACAATTTTGGGTATGGCGAGACGGCCCTCGGCGCCGTCTTT GCCCTCAACGGCATCGCTGTCGGCTTGCTGCAAGTCTTTCTCATCAAGGA CCTGTTTGCCCGCCTAGGCAAACACATGATGCTGGCCTTCGGCAACCTCC TCCTGGCCCTGGGCATGGTGGGCCTCTCCCTCCTTCGCTACAAGCTCTGG CACTTCTCCATGTTCTCCCTCCACATCATCGGCTACGCCATTTCCGACAC TGCCCTTGCCTCCCTCATTTCCCGCTATTCCGCCCCCGAGCACCAAGGCC GCAACCTGGGATGGAGCCACGCTGCCCAGTCCTGCGCCCGTATCATAAGT CCGTTGGTGGCGGGCATGCTCTATGAGTGGAGCAAGGAGCCGGGTCATCC TTTGCCGCCCGGGGCCCTGCCCTACATTGCTGGGAGCGCTTTTCCCTTGT TGGGCGTAATGGTGCCCACGATATTGTATTTGAAAAGCATTGAGCGAAAG AGGATCTTGGCAGCGGAAGGAGGGTAGATGTTGTGCTGCTTGGTGGCCTC CTTCGTCTCCCTTTCCCTCGTGGCCCGCGCCAAGACGCTCCCTCAGGTCG CCTTCGGCCGCGTCATCGGCGGCATGTTCGGTGGCTTCGTTCCCCTAGCC CAGAGCGCCGTCGCGGATTTGGTGCCGGTGGAAGGTCGCGCCAAATTTTT GGGCAGGATCCAGGCGTGTATGGGAGCTGGCTTCGTGGCTGGGCCGGCAC TTGGACTGTTGGGCTCGCGGGTCTTTGAATTGGACTCTCGCGGGATCCTG AAAAGGGCGGCCATCCTGCCGGCTGTTTCCTTTTGTTATGCCTTCGTCTT CATAAAGGAAACCAAGGCCTCCGTCCTCCTTGATCGGGCCCGCCGCAGCC AAGGAAACATAGGCAGCAGCACCAGTAGCACCAGCACCGTGACTACCGCG CGCCCTACCCCCCTCTCTACCCCCATGGATGAAAATGTGGCTTTCCCTAT CCTGCCTGTGCGGCTGTTGGTCCTGAACGGCTTCTTGCTTATGTACGCCT TTTCTGTCGAGACGGTTTATGCCATGTTCATCAAGGACAATTTTGGGTAT GGCGAGACGGCCCTCGGCGCCGTCTTTGCCCTCAACGGCATCGCTGTCGG CTTGCTGCAAGTCTTTCTCATCAAGGACCTGTTTGCCCGCCTAGGCAAAC ACATGATGCTGGCCTTCGGCAACCTCCTCCTGGCCCTGGGCATGGTGGGC CTCTCCCTCCTTCGCTACAAGCTCTGGCACTTCTCCATGTTCTCCCTCCA CATCATCGGCTACGCCATTTCCGACACTGCCCTTGCCTCCCTCATTTCCC GCTATTCCGCCCCCGAGCACCAAGGCCGCAACCTGGGATGGAGCCACGCT GCCCAGTCCTGCGCCCGTATCATAAGTCCGTTGGTGGCGGGCATGCTCTA TGAGTGGAGCAAGGAGCCGGGTCATCCTTTGCCGCCCGGGGCCCTGCCCT ACATTGCTGGGAGCGCTTTTCCCTTGTTGGGCGTAATGGTGCCCACGATA TTGTATTTGAAAAGCATTGAGCGAAAGAGGATCTTGGCAGCGGAAGGAGG GTAGATGTTGTGCTGCTTGGTGGCCTCCTTCGTCTCCCTTTCCCTCGTGG CCCGCGCCAAGACGCTCCCTCAGGTCGCCTTCGGCCGCGTCATCGGCGGC ATGTTCGGTGGCTTCGTTCCCCTAGCCCAGAGCGCCGTCGCGGATTTGGT GCCGGTGGAAGGTCGCGCCAAATTTTTGGGCAGGATCCAGGCGTGTATGG GAGCTGGCTTCGTGGCTGGGCCGGCACTTGGACTGTTGGGCTCGCGGGTC TTTGAATTGGACTCTCGCGGGATCCTGAAAAGGGCGGCCATCCTGCCGGC TGTTTCCTTTTGTTATGCCTTCGTCTTCATAAAGGAAACCAAGGCCTCCG TCCTCCTTGATCGGGCCCGCCGCAGCCAAGGAAACATAGGCAGCAGCACC AGTAGCACCAGCACCGTGACTACCGCGCGCCCTACCCCCCTCTCTACCCC CATGGATGAAAATGTGGCTTTCCCTATCCTGCCTGTGCGGCTGTTGGTCC TGAACGGCTTCTTGCTTATGTACGCCTTTTCTGTCGAGACGGTTTATGCC ATGTTCATCAAGGACAATTTTGGGTATGGCGAGACGGCCCTCGGCGCCGT CTTTGCCCTCAACGGCATCGCTGTCGGCTTGCTGCAAGTCTTTCTCATCA AGGACCTGTTTGCCCGCCTAGGCAAACACATGATGCTGGCCTTCGGCAAC CTCCTCCTGGCCCTGGGCATGGTGGGCCTCTCCCTCCTTCGCTACAAGCT CTGGCACTTCTCCATGTTCTCCCTCCACATCATCGGCTACGCCATTTCCG ACACTGCCCTTGCCTCCCTCATTTCCCGCTATTCCGCCCCCGAGCACCAA GGCCGCAACCTGGGATGGAGCCACGCTGCCCAGTCCTGCGCCCGTATCAT AAGTCCGTTGGTGGCGGGCATGCTCTATGAGTGGAGCAAGGAGCCGGGTC ATCCTTTGCCGCCCGGGGCCCTGCCCTACATTGCTGGGAGCGCTTTTCCC TTGTTGGGCGTAATGGTGCCCACGATATTGTATTTGAAAAGCATTGAGCG AAAGAGGATCTTGGCAGCGGAAGGAGGGTAGATGTTGTGCTGCTTGGTGG CCTCCTTCGTCTCCCTTTCCCTCGTGGCCCGCGCCAAGACGCTCCCTCAG GTCGCCTTCGGCCGCGTCATCGGCGGCATGTTCGGTGGCTTCGTTCCCCT AGCCCAGAGCGCCGTCGCGGATTTGGTGCCGGTGGAAGGTCGCGCCAAAT TTTTGGGCAGGATCCAGGCGTGTATGGGAGCTGGCTTCGTGGCTGGGCCG GCACTTGGACTGTTGGGCTCGCGGGTCTTTGAATTGGACTCTCGCGGGAT CCTGAAAAGGGCGGCCATCCTGCCGGCTGTTTCCTTTTGTTATGCCTTCG TCTTCATAAAGGAAACCAAGGCCTCCGTCCTCCTTGATCGGGCCCGCCGC AGCCAAGGAAACATAGGCAGCAGCACCAGTAGCACCAGCACCGTGACTAC CGCGCGCCCTACCCCCCTCTCTACCCCCATGGATGAAAATGTGGCTTTCC CTATCCTGCCTGTGCGGCTGTTGGTCCTGAACGGCTTCTTGCTTATGTAC GCCTTTTCTGTCGAGACGGTTTATGCCATGTTCATCAAGGACAATTTTGG GTATGGCGAGACGGCCCTCGGCGCCGTCTTTGCCCTCAACGGCATCGCTG TCGGCTTGCTGCAAGTCTTTCTCATCAAGGACCTGTTTGCCCGCCTAGGC AAACACATGATGCTGGCCTTCGGCAACCTCCTCCTGGCCCTGGGCATGGT GGGCCTCTCCCTCCTTCGCTACAAGCTCTGGCACTTCTCCATGTTCTCCC TCCACATCATCGGCTACGCCATTTCCGACACTGCCCTTGCCTCCCTCATT TCCCGCTATTCCGCCCCCGAGCACCAAGGCCGCAACCTGGGATGGAGCCA CGCTGCCCAGTCCTGCGCCCGTATCATAAGTCCGTTGGTGGCGGGCATGC TCTATGAGTGGAGCAAGGAGCCGGGTCATCCTTTGCCGCCCGGGGCCCTG CCCTACATTGCTGGGAGCGCTTTTCCCTTGTTGGGCGTAATGGTGCCCAC GATATTGTATTTGAAAAGCATTGAGCGAAAGAGGATCTTGGCAGCGGAAG GAGGGTAGATGTTGTGCTGCTTGGTGGCCTCCTTCGTCTCCCTTTCCCTC GTGGCCCGCGCCAAGACGCTCCCTCAGGTCGCCTTCGGCCGCGTCATCGG CGGCATGTTCGGTGGCTTCGTTCCCCTAGCCCAGAGCGCCGTCGCGGATT TGGTGCCGGTGGAAGGTCGCGCCAAATTTTTGGGCAGGATCCAGGCGTGT ATGGGAGCTGGCTTCGTGGCTGGGCCGGCACTTGGACTGTTGGGCTCGCG GGTCTTTGAATTGGACTCTCGCGGGATCCTGAAAAGGGCGGCCATCCTGC CGGCTGTTTCCTTTTGTTATGCCTTCGTCTTCATAAAGGAAACCAAGGCC TCCGTCCTCCTTGATCGGGCCCGCCGCAGCCAAGGAAACATAGGCAGCAG CACCAGTAGCACCAGCACCGTGACTACCGCGCGCCCTACCCCCCTCTCTA CCCCCATGGATGAAAATGTGGCTTTCCCTATCCTGCCTGTGCGGCTGTTG GTCCTGAACGGCTTCTTGCTTATGTACGCCTTTTCTGTCGAGACGGTTTA TGCCATGTTCATCAAGGACAATTTTGGGTATGGCGAGACGGCCCTCGGCG CCGTCTTTGCCCTCAACGGCATCGCTGTCGGCTTGCTGCAAGTCTTTCTC ATCAAGGACCTGTTTGCCCGCCTAGGCAAACACATGATGCTGGCCTTCGG CAACCTCCTCCTGGCCCTGGGCATGGTGGGCCTCTCCCTCCTTCGCTACA AGCTCTGGCACTTCTCCATGTTCTCCCTCCACATCATCGGCTACGCCATT TCCGACACTGCCCTTGCCTCCCTCATTTCCCGCTATTCCGCCCCCGAGCA CCAAGGCCGCAACCTGGGATGGAGCCACGCTGCCCAGTCCTGCGCCCGTA TCATAAGTCCGTTGGTGGCGGGCATGCTCTATGAGTGGAGCAAGGAGCCG GGTCATCCTTTGCCGCCCGGGGCCCTGCCCTACATTGCTGGGAGCGCTTT TCCCTTGTTGGGCGTAATGGTGCCCACGATATTGTATTTGAAAAGCATTG AGCGAAAGAGGATCTTGGCAGCGGAAGGAGGGTAGATGTTGTGCTGCTTG GTGGCCTCCTTCGTCTCCCTTTCCCTCGTGGCCCGCGCCAAGACGCTCCC TCAGGTCGCCTTCGGCCGCGTCATCGGCGGCATGTTCGGTGGCTTCGTTC CCCTAGCCCAGAGCGCCGTCGCGGATTTGGTGCCGGTGGAAGGTCGCGCC AAATTTTTGGGCAGGATCCAGGCGTGTATGGGAGCTGGCTTCGTGGCTGG GCCGGCACTTGGACTGTTGGGCTCGCGGGTCTTTGAATTGGACTCTCGCG GGATCCTGAAAAGGGCGGCCATCCTGCCGGCTGTTTCCTTTTGTTATGCC TTCGTCTTCATAAAGGAAACCAAGGCCTCCGTCCTCCTTGATCGGGCCCG CCGCAGCCAAGGAAACATAGGCAGCAGCACCAGTAGCACCAGCACCGTGA CTACCGCGCGCCCTACCCCCCTCTCTACCCCCATGGATGAAAATGTGGCT TTCCCTATCCTGCCTGTGCGGCTGTTGGTCCTGAACGGCTTCTTGCTTAT GTACGCCTTTTCTGTCGAGACGGTTTATGCCATGTTCATCAAGGACAATT TTGGGTATGGCGAGACGGCCCTCGGCGCCGTCTTTGCCCTCAACGGCATC GCTGTCGGCTTGCTGCAAGTCTTTCTCATCAAGGACCTGTTTGCCCGCCT AGGCAAACACATGATGCTGGCCTTCGGCAACCTCCTCCTGGCCCTGGGCA TGGTGGGCCTCTCCCTCCTTCGCTACAAGCTCTGGCACTTCTCCATGTTC TCCCTCCACATCATCGGCTACGCCATTTCCGACACTGCCCTTGCCTCCCT CATTTCCCGCTATTCCGCCCCCGAGCACCAAGGCCGCAACCTGGGATGGA GCCACGCTGCCCAGTCCTGCGCCCGTATCATAAGTCCGTTGGTGGCGGGC ATGCTCTATGAGTGGAGCAAGGAGCCGGGTCATCCTTTGCCGCCCGGGGC CCTGCCCTACATTGCTGGGAGCGCTTTTCCCTTGTTGGGCGTAATGGTGC CCACGATATTGTATTTGAAAAGCATTGAGCGAAAGAGGATCTTGGCAGCG GAAGGAGGGTAG back to top
|