jgi.p|Nanoce1779_2|606910, gene_9721 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|606910
Unique Namegene_9721
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_37:7964..9330 -

Link to JBrowse

Properties
Property NameValue
TranscriptId606996
ProteinId606910
Product name40S ribosomal protein S13
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_37supercontigscaffold_37:7964..9330 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL055ncniL055Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G00670NO19G00670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606910mRNA_9721-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606910mRNA_9721Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|606910

>mRNA_9721-protein ID=mRNA_9721-protein|Name=jgi.p|Nanoce1779_2|606910|organism=Nannochloropsis oceanica|type=polypeptide|length=152bp
MGRMHSSGKGMASSAIPYKRTPPSWVKATAKDVEEHVCKLAKKGLTPSNI
GVILRDSYGIAQVKSVTGSKILRLLKKNLLAPEIPEDLYMLIKKAVAVRK
HLERNRKDKDSKFRLILIESRIHRLARYYRTTRKLTPNWKYESSTAASLV
A*
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Synonyms
Publications