jgi.p|Nanoce1779_2|602003, gene_8433 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|602003
Unique Namegene_8433
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_24:256582..259051 +

Link to JBrowse

Properties
Property NameValue
TranscriptId602089
ProteinId602003
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:256582..259051 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL039ncniL039Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G00830NO23G00830Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602003mRNA_8433-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602003mRNA_8433Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|602003

>mRNA_8433-protein ID=mRNA_8433-protein|Name=jgi.p|Nanoce1779_2|602003|organism=Nannochloropsis oceanica|type=polypeptide|length=688bp
MRASQPPPHYLEHELPRNRAGAWPHHPPPPPHPPHPLLHHHHQYPVFLPQ
SHQEAVLMHRQNYGPPNQFERVSSMHPSYGPPGDEPQQSAPPSHFYHQPY
HHQHEYFQHQRNYQHHPQYPVHAFQPPFHHPIHGFFPPSPSPPPPFPPPP
PPARQWRDGKIPLMAEVRRGRTHSLPSSSPCPKSNLVRGLRGGGQCHIGA
SGMTKGFFGSRGRNSNSWRGGRGGRGGQGAEGAEGADRGDGGVKEIQCDD
RKVLLSLVTARTAGPTPNATAIEKVKCVIEQMHMVAPFLTPAEGLRLSGV
VRSWTRGYREVTRELRVGEPPSGMAVSGHWTSLLNLLSSLTNLETLRVTH
YRSVFGVTKCLGYRLTQRLVCLELSHSKMWCTDAGRLMGALIQKYLPALE
RLLLIDCGLGDRAIEHLAVAVLSGGCRNLVELELGDNTFRESILSLATAL
NSTCVSSADEKGVGDERVPTTKLRLLGLGGNVLQKEGAKLLVLGLSHCNG
RDSAGMGKESNLRYLTELNVVECGLELEGLEALCPGLRQGPLSRLTALRL
NANRLGDAGVALLASAVTEGALSGLRDLDLGANYLSDNGMRALLDVVKTG
MALQQLRRLNLSFNFLTPETVWALLQCCEFGEGGRENARDDDGGMANQGG
WAFLQQCDMYMNEITAKERAELQLALKERAPGLDCFM*
back to top
Synonyms
Publications