jgi.p|Nanoce1779_2|601360, gene_8261 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|601360
Unique Namegene_8261
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_23:218448..219963 -

Link to JBrowse

Properties
Property NameValue
TranscriptId601446
ProteinId601360
Product namecystathionine gamma-synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_23supercontigscaffold_23:218448..219963 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004123cystathionine gamma-lyase activity
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL038ncniL038Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G00890NO29G00890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601360mRNA_8261-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601360mRNA_8261Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|601360

>mRNA_8261-protein ID=mRNA_8261-protein|Name=jgi.p|Nanoce1779_2|601360|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MSAANLPKKASIETILAQAGIRYQEITSISSRDIIPPLHLSTTFERDIDG
TYSNGFVYSRHDHPTRALLEKVMTDIEEGAEWSAAFASGMQAATVLLQAF
GANAYLILPNDLYQGIRILVRSTFEEWGLRNECVDMTDLGAVKEIMDRVF
ADAGTSRVLVWMESPSNPLLKVTDVRAIVALARHYSKKHGKDFLSILDTT
WHSPFLLQALLPLGIDITYGSATKFLGGHSDLLAGVITGRKRKALVSGGG
GMVDLEIPVRHLQQTMGGGLAPFDCWLLLRGLKTLPCRMRTHCENAQKLS
RFFETHPRISVVHFPGLESHPGHGLHRAMMRKEGMDGSMLSIQMKGEEGG
TEDETAVEEEVFKVLARLKIFRRATSLGATESLCEHRRSVEGPLSQTPRN
LVRISVGLEGYEDLEEDWRQALSEEGS*
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Synonyms
Publications