jgi.p|Nanoce1779_2|600486, gene_7908 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|600486
Unique Namegene_7908
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:140036..142921 -

Link to JBrowse

Properties
Property NameValue
TranscriptId600572
ProteinId600486
Product nameProtein phosphatase 2C (PP2C)-like domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:140036..142921 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00870NO26G00870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600486mRNA_7908-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600486mRNA_7908Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|600486

>mRNA_7908-protein ID=mRNA_7908-protein|Name=jgi.p|Nanoce1779_2|600486|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp
MFLPHEASELEVDQYEEDGSPSSSSSSFHSSSSSSAAAAALARATAGQLL
RAYAAPTPPPPSSEDHIRVHSLTLKELALVDENPSAMLAPSLTPPSVPGS
IVKCTAGYGKSGRGKAYRGPAQQVRGPVVVYGEDVLAEAELLLPASVGGA
RVGGAEGREGGQVAAVEAPKWVRAMGVFDGHGMHGREAARVAAERYVDDM
RRTTMQTLGALMAGDVDKVRKVEFDRYRLMEAHLDKELGSPTGGTTATTV
QFLACGGKAWGVVSNVGDSPVLLVDNATGRVQVLTGRHSWDNPEERQKYL
DRCQALGVVPREVVYGRINCGGMRMTDAKGGEEPLMMYREGTSEVCVETR
EWLCKQVEKRYRNSIGGSQSTRRMVLEKLTVKEDGKEGGEWEVYKALEEH
AHTNWGATILVDGEGKIQMSRSLGDSQEKKTAYIWAEPDVSVWELGPGED
WSVIACSDGVGDLWYFHELGAMAADFFAGKDQEGSEGGREGEVQELATLI
LEQTIERGEVAPGYGIAPRVNSVVRGEGLKRPLWDDLSVHCARIQT*
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Synonyms
Publications