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Properties
| Property Name | Value |
|---|
| TranscriptId | 600572 |
| Track | FilteredModels2 |
| ProteinId | 600486 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:140036..142921 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7908 ID=mRNA_7908|Name=jgi.p|Nanoce1779_2|600486|organism=Nannochloropsis oceanica|type=mRNA|length=2730bp
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGAGCGACCTGTC
CTTGTCCGGCCTCCCTCGGGCAGCAAAATGTTTCTCCCTCATGAGGCTTC
TGAACTTGAGGTCGACCAATACGAAGAGGATGGCTCCCCCTCCTCGTCCT
CGTCTTCCTTTCATTCCTCCTCCTCCTCCTCCGCAGCAGCAGCCGCCCTT
GCCCGGGCCACGGCCGGTCAGCTATTGCGTGCCTACGCGGCTCCTACCCC
TCCCCCCCCCTCCTCGGAAGACCACATACGCGTTCATTCCCTAACGTTGA
AAGAGCTGGCACTAGTTGACGAAAATCCGTCGGCCATGCTCGCACCCTCT
CTTACCCCCCCTTCCGTCCCTGGCTCCATCGTCAAGTGCACGGCGGGGTA
TGGGAAATCAGGGAGGGGAAAGGCTTACCGGGGACCGGCCCAGCAGGTAC
GCGGTCCCGTGGTTGTATACGGTGAGGACGTGCTGGCGGAAGCAGAATTA
CTGCTTCCTGCCTCGGTGGGAGGAGCACGCGTGGGAGGGGCTGAAGGGAG
GGAGGGAGGTCAGGTGGCTGCGGTCGAAGCCCCGAAATGGGTACGCGCCA
TGGGGGTGTTTGACGGGCATGGAATGCACGGACGAGAGGCGGCCCGTGTG
GCGGCAGAGAGGTATGTCGACGACATGCGACGCACTACCATGCAAACCCT
AGGGGCCTTAATGGCGGGGGACGTGGACAAGGTGCGGAAGGTGGAGTTTG
ATCGGTACCGTCTGATGGAAGCACATTTGGACAAGGAGCTAGGGAGTCCT
ACGGGGGGCACCACGGCCACGACTGTGCAATTTTTGGCGTGTGGAGGCAA
GGCATGGGGGGTGGTGAGCAATGTGGGGGACAGCCCAGTGTTACTGGTGG
ACAACGCCACGGGACGGGTGCAGGTGCTGACAGGAAGGCATTCGTGGGAC
AATCCCGAGGAACGGCAGAAGTATCTGGATCGGTGTCAGGCTTTGGGGGT
GGTGCCGCGTGAAGTGGTGTATGGAAGGATAAATTGCGGCGGCATGAGGA
TGACGGATGCAAAGGGCGGGGAGGAGCCGCTGATGATGTACCGGGAAGGG
ACCAGTGAGGTGTGTGTGGAGACACGGGAATGGCTATGTAAGCAGGTGGA
GAAGAGGTATCGGAATTCAATCGGGGGGAGTCAGAGTACCCGGAGGATGG
TGTTGGAGAAATTGACGGTGAAGGAGGACGGGAAGGAGGGAGGGGAGTGG
GAGGTGTACAAGGCACTTGAGGAGCATGCACACACGAACTGGGGGGCGAC
GATTCTTGTGGATGGCGAGGGGAAGATCCAGATGTCTCGGTCGCTAGGGG
ACAGTCAGGAGAAGAAGACGGCCTACATATGGGCCGAGCCTGACGTGAGC
GTGTGGGAGCTTGGCCCCGGGGAGGATTGGTCTGTCATAGCCTGTTCGGA
CGGCGTGGGCGATTTGTGGTACTTCCACGAGCTTGGAGCGATGGCAGCGG
ATTTTTTCGCCGGAAAGGACCAGGAGGGGAGTGAAGGCGGGAGGGAGGGA
GAGGTCCAGGAGTTGGCGACGTTGATACTGGAGCAGACGATTGAGAGGGG
AGAGGTTGCCCCGGGGTACGGGATTGCGCCACGGGTGAATAGTGTGGTGA
GGGGGGAGGGCTTGAAGCGCCCTCTGTGGGACGATTTGAGCGTCCATTGC
GCAAGGATTCAAACCTAGACGAACCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCTTCCCTTCCTCCATTTTTGTTGTGTCGCGTGGATGCCGTGACCGGCG
AATGGGACCGTAGGAGGGAGGGAATGAGGCCGAAAAGGCAAAAATTGTGG
TGGTGAATATCTTGTAGAAGGGAGGTTAGAATAAGGAAAGTAAGAGAGAG
ATAAAGGGGACCAGAGAGAGGGGATGAGAGAGAGAAGGCATGTATGTATA
ACTGTCTTTCTCATCCTGCTGGTCTACTCGGTCACTTCCTTTATGTGAAA
AAATAATTAGGCGTTCCTTCGCCACCCAGCCAAGAAGGGGAAAAAGAAGG
AGGAGAAGGAAAAGCTGGCATGTAGCCATAACAGCGAGGTGGAGATTGTT
TGAATATCAGAGTCGGTGTGTGGGCTTGTCGTATGTGTTTGGGGAATGCG
CGCGCATGAGACCACCGGAAGGAAAACGAGGGGAGCAGATGCAGTAGGAG
CAGCAGTATCACCAGCAGTAAGATTAAGGGAACAGTGGAAGAGTTCCAAG
AAGATGAGCAGGAAACGGAAAGGAAGAAAAGGGAGATAGAAAGAGAAAGG
GAGAGACAAGAATGATTTGTCATGCAGGAGTGTGTGTGGGAAGAGCAGCA
GCAGCCGCAGCAACAGCAACAGGAGGGTAGCTCTTACTTACAGGCAGACA
CACCGTGACTGTGTTTGATTCGTTTGCCTCGTCTTCCCTTCTGTCGGGTC
CTTTTTGCCGCGTAGGAGACGCTCGGAATTGATTGAGGAGGGGGAGGAAG
TCGAGAATGAACGGGGATGGAGAAGCAGAAGAGGAGAAGTAGAAGAAGCA
ATATAGGATAGTAGAGTGAGGCCAAGCCAACAACTTAATGGCTCTGGTCC
CAGCGACAAACCGCAACAGTTGTTGTAGCAGCAGCAGCAGCGCCAACGAA
CATTAGGCACGAATAACATAATATAAAAACAATGTCAGAAAAGGGCGTAA
AGCTTTAACAACAACAACAACAACAACAAC back to topprotein sequence of jgi.p|Nanoce1779_2|600486 >mRNA_7908-protein ID=mRNA_7908-protein|Name=jgi.p|Nanoce1779_2|600486|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp
MFLPHEASELEVDQYEEDGSPSSSSSSFHSSSSSSAAAAALARATAGQLL
RAYAAPTPPPPSSEDHIRVHSLTLKELALVDENPSAMLAPSLTPPSVPGS
IVKCTAGYGKSGRGKAYRGPAQQVRGPVVVYGEDVLAEAELLLPASVGGA
RVGGAEGREGGQVAAVEAPKWVRAMGVFDGHGMHGREAARVAAERYVDDM
RRTTMQTLGALMAGDVDKVRKVEFDRYRLMEAHLDKELGSPTGGTTATTV
QFLACGGKAWGVVSNVGDSPVLLVDNATGRVQVLTGRHSWDNPEERQKYL
DRCQALGVVPREVVYGRINCGGMRMTDAKGGEEPLMMYREGTSEVCVETR
EWLCKQVEKRYRNSIGGSQSTRRMVLEKLTVKEDGKEGGEWEVYKALEEH
AHTNWGATILVDGEGKIQMSRSLGDSQEKKTAYIWAEPDVSVWELGPGED
WSVIACSDGVGDLWYFHELGAMAADFFAGKDQEGSEGGREGEVQELATLI
LEQTIERGEVAPGYGIAPRVNSVVRGEGLKRPLWDDLSVHCARIQT* back to topmRNA from alignment at scaffold_22:140036..142921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7908 ID=mRNA_7908|Name=jgi.p|Nanoce1779_2|600486|organism=Nannochloropsis oceanica|type=mRNA|length=2886bp|location=Sequence derived from alignment at scaffold_22:140036..142921- (Nannochloropsis oceanica)
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGAGCGACCTGTC
CTTGTCCGGCCTCCCTCGGGCAGCAAAATGTTTCTCCCTCATGAGGCTTC
TGAACTTGAGGTCGACCAATACGAAGAGGATGGCTCCCCCTCCTCGTCCT
CGTCTTCCTTTCATTCCTCCTCCTCCTCCTCCGCAGCAGCAGCCGCCCTT
GCCCGGGCCACGGCCGGTCAGCTATTGCGTGCCTACGCGGCTCCTACCCC
TCCCCCCCCCTCCTCGGAAGACCACATACGCGTTCATTCCCTAACGTTGA
AAGAGCTGGCACTAGTTGACGAAAATCCGTCGGCCATGCTCGCACCCTCT
CTTACCCCCCCTTCCGTCCCTGGCTCCATCGTCAAGTGCACGGCGGGGTA
TGGGAAATCAGGGAGGGGAAAGGCTTACCGGGGACCGGCCCAGCAGGTAC
GCGGTCCCGTGGTTGTATACGGTGAGGACGTGCTGGCGGAAGCAGAATTA
CTGCTTCCTGCCTCGGTGGGAGGAGCACGCGTGGGAGGGGCTGAAGGGAG
GGAGGGAGGTCAGGTGGCTGCGGTCGAAGCCCCGAAATGGGTACGCGCCA
TGGGGGTGTTTGACGGGCATGGAATGCACGGACGAGAGGCGGCCCGTGTG
GCGGCAGAGAGGTATGTCGACGACATGCGACGCACTACCATGCAAACCCT
AGGGGCCTTAATGGCGGGGGACGTGGACAAGGTGCGGAAGGTGGAGTTTG
ATCGGTACCGTCTGATGGAAGCACATTTGGACAAGGAGCTAGGGAGTCCT
ACGGGGGGCACCACGGCCACGACTGTGCAATTTTTGGCGTGTGGAGGCAA
GGCATGGGGGGTGGTGAGCAATGTGGGGGACAGCCCAGTGTTACTGGTGG
ACAACGCCACGGGACGGGTGCAGGTGCTGACAGGAAGGCATTCGTGGGAC
AATCCCGAGGAACGGCAGAAGTATCTGGATCGGTGTCAGGCTTTGGGGGT
GGTGCCGCGTGAAGTGGTGTATGGAAGGATAAATTGCGGCGGCATGAGGA
TGACGGATGCAAAGGGCGGGGAGGAGCCGCTGATGATGTACCGGGAAGGG
ACCAGTGAGGTGTGTGTGGAGACACGGGAATGGCTATGTAAGCAGGTGGA
GAAGAGGTATCGGAATTCAATCGGGGGGAGTCAGAGTACCCGGAGGATGG
TGTTGGAGAAATTGACGGTGAAGGAGGACGGGAAGGAGGGAGGGGAGTGG
GAGGTGTACAAGGCACTTGAGGAGCATGCACACACGAACTGGGGGGCGAC
GATTCTTGTGGATGGCGAGGGGAAGATCCAGATGTCTCGGTCGCTAGGGG
ACAGTCAGGAGAAGAAGACGGCCTACATATGGGCCGAGCCTGACGTGAGC
GTGTGGGAGCTTGGCCCCGGGGAGGATTGGTGAGAGAACAGTATCTTCCC
CCGTCCTTCTCCCCCTCCTTCCCTTTTTCCCTCCCTCCTTCCCTCCTTTC
CTCCTCCTCTCCACTCTTTTCTTGACAGATGGGCAGAGCCTCATGTCCCC
TCTCTCCCTTCTTACTTCCCTCCCTCCATCCTCAGGTCTGTCATAGCCTG
TTCGGACGGCGTGGGCGATTTGTGGTACTTCCACGAGCTTGGAGCGATGG
CAGCGGATTTTTTCGCCGGAAAGGACCAGGAGGGGAGTGAAGGCGGGAGG
GAGGGAGAGGTCCAGGAGTTGGCGACGTTGATACTGGAGCAGACGATTGA
GAGGGGAGAGGTTGCCCCGGGGTACGGGATTGCGCCACGGGTGAATAGTG
TGGTGAGGGGGGAGGGCTTGAAGCGCCCTCTGTGGGACGATTTGAGCGTC
CATTGCGCAAGGATTCAAACCTAGACGAACCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCTTCCCTTCCTCCATTTTTGTTGTGTCGCGTGGATGCCGTGA
CCGGCGAATGGGACCGTAGGAGGGAGGGAATGAGGCCGAAAAGGCAAAAA
TTGTGGTGGTGAATATCTTGTAGAAGGGAGGTTAGAATAAGGAAAGTAAG
AGAGAGATAAAGGGGACCAGAGAGAGGGGATGAGAGAGAGAAGGCATGTA
TGTATAACTGTCTTTCTCATCCTGCTGGTCTACTCGGTCACTTCCTTTAT
GTGAAAAAATAATTAGGCGTTCCTTCGCCACCCAGCCAAGAAGGGGAAAA
AGAAGGAGGAGAAGGAAAAGCTGGCATGTAGCCATAACAGCGAGGTGGAG
ATTGTTTGAATATCAGAGTCGGTGTGTGGGCTTGTCGTATGTGTTTGGGG
AATGCGCGCGCATGAGACCACCGGAAGGAAAACGAGGGGAGCAGATGCAG
TAGGAGCAGCAGTATCACCAGCAGTAAGATTAAGGGAACAGTGGAAGAGT
TCCAAGAAGATGAGCAGGAAACGGAAAGGAAGAAAAGGGAGATAGAAAGA
GAAAGGGAGAGACAAGAATGATTTGTCATGCAGGAGTGTGTGTGGGAAGA
GCAGCAGCAGCCGCAGCAACAGCAACAGGAGGGTAGCTCTTACTTACAGG
CAGACACACCGTGACTGTGTTTGATTCGTTTGCCTCGTCTTCCCTTCTGT
CGGGTCCTTTTTGCCGCGTAGGAGACGCTCGGAATTGATTGAGGAGGGGG
AGGAAGTCGAGAATGAACGGGGATGGAGAAGCAGAAGAGGAGAAGTAGAA
GAAGCAATATAGGATAGTAGAGTGAGGCCAAGCCAACAACTTAATGGCTC
TGGTCCCAGCGACAAACCGCAACAGTTGTTGTAGCAGCAGCAGCAGCGCC
AACGAACATTAGGCACGAATAACATAATATAAAAACAATGTCAGAAAAGG
GCGTAAAGCTTTAACAACAACAACAACAACAACAAC back to topCoding sequence (CDS) from alignment at scaffold_22:140036..142921- >mRNA_7908 ID=mRNA_7908|Name=jgi.p|Nanoce1779_2|600486|organism=Nannochloropsis oceanica|type=CDS|length=3282bp|location=Sequence derived from alignment at scaffold_22:140036..142921- (Nannochloropsis oceanica)
GTCTGTCATAGCCTGTTCGGACGGCGTGGGCGATTTGTGGTACTTCCACG
AGCTTGGAGCGATGGCAGCGGATTTTTTCGCCGGAAAGGACCAGGAGGGG
AGTGAAGGCGGGAGGGAGGGAGAGGTCCAGGAGTTGGCGACGTTGATACT
GGAGCAGACGATTGAGAGGGGAGAGGTTGCCCCGGGGTACGGGATTGCGC
CACGGGTGAATAGTGTGGTGAGGGGGGAGGGCTTGAAGCGCCCTCTGTGG
GACGATTTGAGCGTCCATTGCGCAAGGATTCAAACCTAGATGTTTCTCCC
TCATGAGGCTTCTGAACTTGAGGTCGACCAATACGAAGAGGATGGCTCCC
CCTCCTCGTCCTCGTCTTCCTTTCATTCCTCCTCCTCCTCCTCCGCAGCA
GCAGCCGCCCTTGCCCGGGCCACGGCCGGTCAGCTATTGCGTGCCTACGC
GGCTCCTACCCCTCCCCCCCCCTCCTCGGAAGACCACATACGCGTTCATT
CCCTAACGTTGAAAGAGCTGGCACTAGTTGACGAAAATCCGTCGGCCATG
CTCGCACCCTCTCTTACCCCCCCTTCCGTCCCTGGCTCCATCGTCAAGTG
CACGGCGGGGTATGGGAAATCAGGGAGGGGAAAGGCTTACCGGGGACCGG
CCCAGCAGGTACGCGGTCCCGTGGTTGTATACGGTGAGGACGTGCTGGCG
GAAGCAGAATTACTGCTTCCTGCCTCGGTGGGAGGAGCACGCGTGGGAGG
GGCTGAAGGGAGGGAGGGAGGTCAGGTGGCTGCGGTCGAAGCCCCGAAAT
GGGTACGCGCCATGGGGGTGTTTGACGGGCATGGAATGCACGGACGAGAG
GCGGCCCGTGTGGCGGCAGAGAGGTATGTCGACGACATGCGACGCACTAC
CATGCAAACCCTAGGGGCCTTAATGGCGGGGGACGTGGACAAGGTGCGGA
AGGTGGAGTTTGATCGGTACCGTCTGATGGAAGCACATTTGGACAAGGAG
CTAGGGAGTCCTACGGGGGGCACCACGGCCACGACTGTGCAATTTTTGGC
GTGTGGAGGCAAGGCATGGGGGGTGGTGAGCAATGTGGGGGACAGCCCAG
TGTTACTGGTGGACAACGCCACGGGACGGGTGCAGGTGCTGACAGGAAGG
CATTCGTGGGACAATCCCGAGGAACGGCAGAAGTATCTGGATCGGTGTCA
GGCTTTGGGGGTGGTGCCGCGTGAAGTGGTGTATGGAAGGATAAATTGCG
GCGGCATGAGGATGACGGATGCAAAGGGCGGGGAGGAGCCGCTGATGATG
TACCGGGAAGGGACCAGTGAGGTGTGTGTGGAGACACGGGAATGGCTATG
TAAGCAGGTGGAGAAGAGGTATCGGAATTCAATCGGGGGGAGTCAGAGTA
CCCGGAGGATGGTGTTGGAGAAATTGACGGTGAAGGAGGACGGGAAGGAG
GGAGGGGAGTGGGAGGTGTACAAGGCACTTGAGGAGCATGCACACACGAA
CTGGGGGGCGACGATTCTTGTGGATGGCGAGGGGAAGATCCAGATGTCTC
GGTCGCTAGGGGACAGTCAGGAGAAGAAGACGGCCTACATATGGGCCGAG
CCTGACGTGAGCGTGTGGGAGCTTGGCCCCGGGGAGGATTGGTCTGTCAT
AGCCTGTTCGGACGGCGTGGGCGATTTGTGGTACTTCCACGAGCTTGGAG
CGATGGCAGCGGATTTTTTCGCCGGAAAGGACCAGGAGGGGAGTGAAGGC
GGGAGGGAGGGAGAGGTCCAGGAGTTGGCGACGTTGATACTGGAGCAGAC
GATTGAGAGGGGAGAGGTTGCCCCGGGGTACGGGATTGCGCCACGGGTGA
ATAGTGTGGTGAGGGGGGAGGGCTTGAAGCGCCCTCTGTGGGACGATTTG
AGCGTCCATTGCGCAAGGATTCAAACCTAGATGTTTCTCCCTCATGAGGC
TTCTGAACTTGAGGTCGACCAATACGAAGAGGATGGCTCCCCCTCCTCGT
CCTCGTCTTCCTTTCATTCCTCCTCCTCCTCCTCCGCAGCAGCAGCCGCC
CTTGCCCGGGCCACGGCCGGTCAGCTATTGCGTGCCTACGCGGCTCCTAC
CCCTCCCCCCCCCTCCTCGGAAGACCACATACGCGTTCATTCCCTAACGT
TGAAAGAGCTGGCACTAGTTGACGAAAATCCGTCGGCCATGCTCGCACCC
TCTCTTACCCCCCCTTCCGTCCCTGGCTCCATCGTCAAGTGCACGGCGGG
GTATGGGAAATCAGGGAGGGGAAAGGCTTACCGGGGACCGGCCCAGCAGG
TACGCGGTCCCGTGGTTGTATACGGTGAGGACGTGCTGGCGGAAGCAGAA
TTACTGCTTCCTGCCTCGGTGGGAGGAGCACGCGTGGGAGGGGCTGAAGG
GAGGGAGGGAGGTCAGGTGGCTGCGGTCGAAGCCCCGAAATGGGTACGCG
CCATGGGGGTGTTTGACGGGCATGGAATGCACGGACGAGAGGCGGCCCGT
GTGGCGGCAGAGAGGTATGTCGACGACATGCGACGCACTACCATGCAAAC
CCTAGGGGCCTTAATGGCGGGGGACGTGGACAAGGTGCGGAAGGTGGAGT
TTGATCGGTACCGTCTGATGGAAGCACATTTGGACAAGGAGCTAGGGAGT
CCTACGGGGGGCACCACGGCCACGACTGTGCAATTTTTGGCGTGTGGAGG
CAAGGCATGGGGGGTGGTGAGCAATGTGGGGGACAGCCCAGTGTTACTGG
TGGACAACGCCACGGGACGGGTGCAGGTGCTGACAGGAAGGCATTCGTGG
GACAATCCCGAGGAACGGCAGAAGTATCTGGATCGGTGTCAGGCTTTGGG
GGTGGTGCCGCGTGAAGTGGTGTATGGAAGGATAAATTGCGGCGGCATGA
GGATGACGGATGCAAAGGGCGGGGAGGAGCCGCTGATGATGTACCGGGAA
GGGACCAGTGAGGTGTGTGTGGAGACACGGGAATGGCTATGTAAGCAGGT
GGAGAAGAGGTATCGGAATTCAATCGGGGGGAGTCAGAGTACCCGGAGGA
TGGTGTTGGAGAAATTGACGGTGAAGGAGGACGGGAAGGAGGGAGGGGAG
TGGGAGGTGTACAAGGCACTTGAGGAGCATGCACACACGAACTGGGGGGC
GACGATTCTTGTGGATGGCGAGGGGAAGATCCAGATGTCTCGGTCGCTAG
GGGACAGTCAGGAGAAGAAGACGGCCTACATATGGGCCGAGCCTGACGTG
AGCGTGTGGGAGCTTGGCCCCGGGGAGGATTG back to top
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