jgi.p|Nanoce1779_2|167122, gene_7717 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|167122
Unique Namegene_7717
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:154784..156716 -

Link to JBrowse

Properties
Property NameValue
TranscriptId167208
ProteinId167122
Product nameNucleolar protein,Nop52-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:154784..156716 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0030688preribosome, small subunit precursor
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL035ncniL035Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01750NO17G01750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|167122mRNA_7717-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|167122mRNA_7717Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|167122

>mRNA_7717-protein ID=mRNA_7717-protein|Name=jgi.p|Nanoce1779_2|167122|organism=Nannochloropsis oceanica|type=polypeptide|length=467bp
MVLMGSGGMSNSGRSSKKSRALLSPQVMKATASSSSVEVVMTPAIVEGSN
GKGSNGKVILQEEKEIIAFARRLAANEKRDRDQALKRLEGWMTKHKQLSE
KDLLKIWKGLFYCMWMSDKAQVQQELGRAISRLVHCFGQDLARAHLFVAT
FYRTVRREWTGLDQHRLDKFYSFMRSMLRECLTFAQQHDWSSEALAAVVL
PLDAEVLVQPWPNGLRLHMCDLIIPELAKIGGPRLTTPQALAVLQPFLVA
MATSADRVVAERARARVLLDLIEAKSKQRVKRGALDEDSEGGDGGSMLNG
VDLEALQATVFELAAAPETRERYRAGLYDAHKGLQSLTGKKRASSPKAMI
VSLPKPSGTPVERNGKRAGREGEEGEERRRTIGWMKMKIKMRLEVRKRKV
RPKMRRGFSCCTRKGQQEAQGPERDCSTQTAAAAKGRGEAGCGNRRQEGQ
EGRKTDGLTHSYAGVE*
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Synonyms
Publications